RNA–Protein interactions for RNA: ENST00000508216.5

PDLIM5-210, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 1,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-210ENST00000508216 KCNQ3O43525 872 aa11.08□□□□□ -0.64
PDLIM5-210ENST00000508216 NOS1APO75052 506 aaPredicted RBP11.08□□□□□ -0.64
PDLIM5-210ENST00000508216 ZNF623O75123 536 aa11.08□□□□□ -0.64
PDLIM5-210ENST00000508216 CLPXO76031 633 aa11.08□□□□□ -0.64
PDLIM5-210ENST00000508216 TGDSO95455 350 aa11.08□□□□□ -0.64
PDLIM5-210ENST00000508216 CFBP00751 764 aa11.08□□□□□ -0.64
PDLIM5-210ENST00000508216 ACTN1P12814 892 aa11.08□□□□□ -0.64
PDLIM5-210ENST00000508216 BMP1P13497 986 aa11.08□□□□□ -0.64
PDLIM5-210ENST00000508216 POU2F1P14859 743 aa11.08□□□□□ -0.64
PDLIM5-210ENST00000508216 GRK2P25098 689 aa11.08□□□□□ -0.64
PDLIM5-210ENST00000508216 MAOBP27338 520 aa11.08□□□□□ -0.64
PDLIM5-210ENST00000508216 GABRB3P28472 473 aa11.08□□□□□ -0.64
PDLIM5-210ENST00000508216 UGT2B10P36537 528 aa11.08□□□□□ -0.64
PDLIM5-210ENST00000508216 GARSP41250 739 aaKnown RBP11.08□□□□□ -0.64
PDLIM5-210ENST00000508216 ARSDP51689 593 aa11.08□□□□□ -0.64
PDLIM5-210ENST00000508216 NDST1P52848 882 aa11.08□□□□□ -0.64
PDLIM5-210ENST00000508216 BNC1Q01954 994 aa11.08□□□□□ -0.64
PDLIM5-210ENST00000508216 SSRP1Q08945 709 aaKnown RBP11.08□□□□□ -0.64
PDLIM5-210ENST00000508216 SF3A3Q12874 501 aaKnown RBP eCLIP11.08□□□□□ -0.64
PDLIM5-210ENST00000508216 LRRC14Q15048 493 aa11.08□□□□□ -0.64
PDLIM5-210ENST00000508216 AMHR2Q16671 573 aa11.08□□□□□ -0.64
PDLIM5-210ENST00000508216 ASTE1Q2TB18 679 aaPredicted RBP11.08□□□□□ -0.64
PDLIM5-210ENST00000508216 SHQ1Q6PI26 577 aaKnown RBP11.08□□□□□ -0.64
PDLIM5-210ENST00000508216 RNF111Q6ZNA4 994 aa11.08□□□□□ -0.64
PDLIM5-210ENST00000508216 GADL1Q6ZQY3 521 aa11.08□□□□□ -0.64
PDLIM5-210ENST00000508216 HTR3DQ70Z44 454 aa11.08□□□□□ -0.64
PDLIM5-210ENST00000508216 FKBP9P1Q75LS8 142 aa11.08□□□□□ -0.64
PDLIM5-210ENST00000508216 BTN2A1Q7KYR7 527 aa11.08□□□□□ -0.64
PDLIM5-210ENST00000508216 HID1Q8IV36 788 aa11.08□□□□□ -0.64
PDLIM5-210ENST00000508216 SLC44A2Q8IWA5 706 aaPredicted RBP11.08□□□□□ -0.64
PDLIM5-210ENST00000508216 CHERPQ8IWX8 916 aaKnown RBP11.08□□□□□ -0.64
PDLIM5-210ENST00000508216 KLHL7Q8IXQ5 586 aa11.08□□□□□ -0.64
PDLIM5-210ENST00000508216 COLGALT2Q8IYK4 626 aa11.08□□□□□ -0.64
PDLIM5-210ENST00000508216 TAGAPQ8N103 731 aa11.08□□□□□ -0.64
PDLIM5-210ENST00000508216 FNDC5Q8NAU1 212 aa11.08□□□□□ -0.64
PDLIM5-210ENST00000508216 VANGL1Q8TAA9 524 aaPredicted RBP11.08□□□□□ -0.64
PDLIM5-210ENST00000508216 LRRC20Q8TCA0 184 aa11.08□□□□□ -0.64
PDLIM5-210ENST00000508216 MCOLN3Q8TDD5 553 aa11.08□□□□□ -0.64
PDLIM5-210ENST00000508216 KLHL6Q8WZ60 621 aa11.08□□□□□ -0.64
PDLIM5-210ENST00000508216 EDC3Q96F86 508 aaKnown RBP11.08□□□□□ -0.64
PDLIM5-210ENST00000508216 DCUN1D1Q96GG9 259 aa11.08□□□□□ -0.64
PDLIM5-210ENST00000508216 HES6Q96HZ4 224 aa11.08□□□□□ -0.64
PDLIM5-210ENST00000508216 ERGIC2Q96RQ1 377 aa11.08□□□□□ -0.64
PDLIM5-210ENST00000508216 PSMB7Q99436 277 aa11.08□□□□□ -0.64
PDLIM5-210ENST00000508216 GDF15Q99988 308 aa11.08□□□□□ -0.64
PDLIM5-210ENST00000508216 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.08□□□□□ -0.64
PDLIM5-210ENST00000508216 ACTR3BQ9P1U1 418 aa11.08□□□□□ -0.64
PDLIM5-210ENST00000508216 TXNDC16Q9P2K2 825 aa11.08□□□□□ -0.64
PDLIM5-210ENST00000508216 DNMT3LQ9UJW3 386 aa11.08□□□□□ -0.64
PDLIM5-210ENST00000508216 BAG5Q9UL15 447 aa11.08□□□□□ -0.64
PDLIM5-210ENST00000508216 POLIQ9UNA4 740 aa11.08□□□□□ -0.64
PDLIM5-210ENST00000508216 MTO1Q9Y2Z2 717 aaKnown RBP11.08□□□□□ -0.64
PDLIM5-210ENST00000508216 DERAQ9Y315 318 aa11.08□□□□□ -0.64
PDLIM5-210ENST00000508216 CAB39Q9Y376 341 aaPredicted RBP11.08□□□□□ -0.64
PDLIM5-210ENST00000508216 PRELID3BQ9Y3B1 194 aa11.08□□□□□ -0.64
PDLIM5-210ENST00000508216 ABCB11O95342 1321 aa11.08□□□□□ -0.64
PDLIM5-210ENST00000508216 KRT8P05787 483 aa11.08□□□□□ -0.64
PDLIM5-210ENST00000508216 SERPINB1P30740 379 aa11.08□□□□□ -0.64
PDLIM5-210ENST00000508216 MAGEA1P43355 309 aa11.08□□□□□ -0.64
PDLIM5-210ENST00000508216 CACNB3P54284 484 aa11.08□□□□□ -0.64
PDLIM5-210ENST00000508216 COPZ1P61923 177 aa11.08□□□□□ -0.64
PDLIM5-210ENST00000508216 BTKQ06187 659 aa11.08□□□□□ -0.64
PDLIM5-210ENST00000508216 PIK3R6Q5UE93 754 aa11.08□□□□□ -0.64
PDLIM5-210ENST00000508216 UBE2UQ5VVX9 321 aa11.08□□□□□ -0.64
PDLIM5-210ENST00000508216 ARSKQ6UWY0 536 aa11.08□□□□□ -0.64
PDLIM5-210ENST00000508216 CENPUQ71F23 418 aa11.08□□□□□ -0.64
PDLIM5-210ENST00000508216 ZNF767PQ75MW2 155 aa11.08□□□□□ -0.64
PDLIM5-210ENST00000508216 SETD3Q86TU7 594 aaPredicted RBP11.08□□□□□ -0.64
PDLIM5-210ENST00000508216 ANKRD35Q8N283 1001 aa11.08□□□□□ -0.64
PDLIM5-210ENST00000508216 OR8K3Q8NH51 312 aa11.08□□□□□ -0.64
PDLIM5-210ENST00000508216 SYTL5Q8TDW5 730 aaPredicted RBP11.08□□□□□ -0.64
PDLIM5-210ENST00000508216 ATP2A3Q93084 1043 aa11.08□□□□□ -0.64
PDLIM5-210ENST00000508216 MRRFQ96E11 262 aaKnown RBP11.08□□□□□ -0.64
PDLIM5-210ENST00000508216 RIPOR3Q96MK2 946 aa11.08□□□□□ -0.64
PDLIM5-210ENST00000508216 HS6ST2Q96MM7 605 aa11.08□□□□□ -0.64
PDLIM5-210ENST00000508216 CCDC106Q9BWC9 280 aa11.08□□□□□ -0.64
PDLIM5-210ENST00000508216 TMEM245Q9H330 911 aa11.08□□□□□ -0.64
PDLIM5-210ENST00000508216 TUFT1Q9NNX1 390 aa11.08□□□□□ -0.64
PDLIM5-210ENST00000508216 ZC4H2Q9NQZ6 224 aa11.08□□□□□ -0.64
PDLIM5-210ENST00000508216 VPS54Q9P1Q0 977 aa11.08□□□□□ -0.64
PDLIM5-210ENST00000508216 CPNE7Q9UBL6 633 aa11.08□□□□□ -0.64
PDLIM5-210ENST00000508216 TEKT2Q9UIF3 430 aa11.08□□□□□ -0.64
PDLIM5-210ENST00000508216 ADAMTS6Q9UKP5 1117 aa11.08□□□□□ -0.64
PDLIM5-210ENST00000508216 DAGLAQ9Y4D2 1042 aa11.08□□□□□ -0.64
PDLIM5-210ENST00000508216 SYNJ2BP-COX16A0A087WUM0 186 aa11.07□□□□□ -0.64
PDLIM5-210ENST00000508216 TLDC2A0PJX2 215 aa11.07□□□□□ -0.64
PDLIM5-210ENST00000508216 A8MU76 341 aa11.07□□□□□ -0.64
PDLIM5-210ENST00000508216 LINC01387J3KSC0 135 aa11.07□□□□□ -0.64
PDLIM5-210ENST00000508216 SORBS3O60504 671 aa11.07□□□□□ -0.64
PDLIM5-210ENST00000508216 NIPSNAP2O75323 286 aa11.07□□□□□ -0.64
PDLIM5-210ENST00000508216 KRT37O76014 449 aa11.07□□□□□ -0.64
PDLIM5-210ENST00000508216 CALB1P05937 261 aa11.07□□□□□ -0.64
PDLIM5-210ENST00000508216 UGT2B4P06133 528 aa11.07□□□□□ -0.64
PDLIM5-210ENST00000508216 BRAFP15056 766 aa11.07□□□□□ -0.64
PDLIM5-210ENST00000508216 SOX5P35711 763 aa11.07□□□□□ -0.64
PDLIM5-210ENST00000508216 CASP3P42574 277 aa11.07□□□□□ -0.64
PDLIM5-210ENST00000508216 RECQLP46063 649 aaPredicted RBP11.07□□□□□ -0.64
PDLIM5-210ENST00000508216 MTIF2P46199 727 aaKnown RBP11.07□□□□□ -0.64
PDLIM5-210ENST00000508216 EEF1A1P68104 462 aaKnown RBP11.07□□□□□ -0.64
PDLIM5-210ENST00000508216 CYP27A1Q02318 531 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms