RNA–Protein interactions for RNA: ENST00000504430.5

NIPBL-204, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 3,455 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-204ENST00000504430 DUSP15Q9H1R2 295 aaPredicted RBP5.46□□□□□ -1.54
NIPBL-204ENST00000504430 G6PC2Q9NQR9 355 aa5.46□□□□□ -1.54
NIPBL-204ENST00000504430 CYP39A1Q9NYL5 469 aa5.46□□□□□ -1.54
NIPBL-204ENST00000504430 MYOTQ9UBF9 498 aa5.46□□□□□ -1.54
NIPBL-204ENST00000504430 DNAI1Q9UI46 699 aa5.46□□□□□ -1.54
NIPBL-204ENST00000504430 DERAQ9Y315 318 aa5.46□□□□□ -1.54
NIPBL-204ENST00000504430 ADARB2-AS1A8MUL3 147 aa5.46□□□□□ -1.54
NIPBL-204ENST00000504430 TMEM232C9JQI7 657 aa5.46□□□□□ -1.54
NIPBL-204ENST00000504430 ZNF853P0CG23 659 aa5.46□□□□□ -1.54
NIPBL-204ENST00000504430 PSMB10P40306 273 aa5.46□□□□□ -1.54
NIPBL-204ENST00000504430 ZNF81P51508 661 aa5.46□□□□□ -1.54
NIPBL-204ENST00000504430 TUBB4BP68371 445 aa5.46□□□□□ -1.54
NIPBL-204ENST00000504430 TMEM115Q12893 351 aaPredicted RBP5.46□□□□□ -1.54
NIPBL-204ENST00000504430 EFTUD2Q15029 972 aaKnown RBP eCLIP5.46□□□□□ -1.54
NIPBL-204ENST00000504430 SYCP1Q15431 976 aa5.46□□□□□ -1.54
NIPBL-204ENST00000504430 AOC3Q16853 763 aa5.46□□□□□ -1.54
NIPBL-204ENST00000504430 KCNT1Q5JUK3 1230 aa5.46□□□□□ -1.54
NIPBL-204ENST00000504430 KANSL1Q7Z3B3 1105 aa5.46□□□□□ -1.54
NIPBL-204ENST00000504430 DAGLBQ8NCG7 672 aa5.46□□□□□ -1.54
NIPBL-204ENST00000504430 SUPT20HQ8NEM7 779 aa5.46□□□□□ -1.54
NIPBL-204ENST00000504430 MAML3Q96JK9 1138 aa5.46□□□□□ -1.54
NIPBL-204ENST00000504430 NR1H4Q96RI1 486 aaPredicted RBP5.46□□□□□ -1.54
NIPBL-204ENST00000504430 GON7Q9BXV9 100 aa5.46□□□□□ -1.54
NIPBL-204ENST00000504430 POLR1BQ9H9Y6 1135 aa5.46□□□□□ -1.54
NIPBL-204ENST00000504430 SEMA4BQ9NPR2 832 aaPredicted RBP5.46□□□□□ -1.54
NIPBL-204ENST00000504430 SPASTQ9UBP0 616 aa5.46□□□□□ -1.54
NIPBL-204ENST00000504430 IL19Q9UHD0 177 aa5.46□□□□□ -1.54
NIPBL-204ENST00000504430 AGAP1Q9UPQ3 857 aa5.46□□□□□ -1.54
NIPBL-204ENST00000504430 TEX264Q9Y6I9 313 aa5.46□□□□□ -1.54
NIPBL-204ENST00000504430 FAM237BA0A1B0GVD1 139 aa5.45□□□□□ -1.54
NIPBL-204ENST00000504430 CTDSP2O14595 271 aa5.45□□□□□ -1.54
NIPBL-204ENST00000504430 RPP40O75818 363 aaKnown RBP5.45□□□□□ -1.54
NIPBL-204ENST00000504430 ALDH1A2O94788 518 aa5.45□□□□□ -1.54
NIPBL-204ENST00000504430 PDGFRAP16234 1089 aa5.45□□□□□ -1.54
NIPBL-204ENST00000504430 DDCP20711 480 aa5.45□□□□□ -1.54
NIPBL-204ENST00000504430 CASTP20810 708 aaKnown RBP5.45□□□□□ -1.54
NIPBL-204ENST00000504430 SERPINA4P29622 427 aa5.45□□□□□ -1.54
NIPBL-204ENST00000504430 KRT2P35908 639 aa5.45□□□□□ -1.54
NIPBL-204ENST00000504430 SLC16A2P36021 539 aa5.45□□□□□ -1.54
NIPBL-204ENST00000504430 ALDH18A1P54886 795 aaKnown RBP5.45□□□□□ -1.54
NIPBL-204ENST00000504430 PER3P56645 1201 aa5.45□□□□□ -1.54
NIPBL-204ENST00000504430 ANTXR2P58335 489 aa5.45□□□□□ -1.54
NIPBL-204ENST00000504430 HADHQ16836 314 aaKnown RBP5.45□□□□□ -1.54
NIPBL-204ENST00000504430 KRT71Q3SY84 523 aa5.45□□□□□ -1.54
NIPBL-204ENST00000504430 TOR1AIP1Q5JTV8 583 aa5.45□□□□□ -1.54
NIPBL-204ENST00000504430 C12orf60Q5U649 245 aa5.45□□□□□ -1.54
NIPBL-204ENST00000504430 AACSQ86V21 672 aa5.45□□□□□ -1.54
NIPBL-204ENST00000504430 HEXIM2Q96MH2 286 aaKnown RBP5.45□□□□□ -1.54
NIPBL-204ENST00000504430 WRNIP1Q96S55 665 aa5.45□□□□□ -1.54
NIPBL-204ENST00000504430 GAD1Q99259 594 aa5.45□□□□□ -1.54
NIPBL-204ENST00000504430 SYT3Q9BQG1 590 aa5.45□□□□□ -1.54
NIPBL-204ENST00000504430 FUZQ9BT04 418 aa5.45□□□□□ -1.54
NIPBL-204ENST00000504430 AMNQ9BXJ7 453 aa5.45□□□□□ -1.54
NIPBL-204ENST00000504430 STN1Q9H668 368 aaKnown RBP5.45□□□□□ -1.54
NIPBL-204ENST00000504430 SMPD3Q9NY59 655 aaPredicted RBP5.45□□□□□ -1.54
NIPBL-204ENST00000504430 SUCLA2Q9P2R7 463 aaPredicted RBP5.45□□□□□ -1.54
NIPBL-204ENST00000504430 FBXO40Q9UH90 709 aa5.45□□□□□ -1.54
NIPBL-204ENST00000504430 MKLN1Q9UL63 735 aa5.45□□□□□ -1.54
NIPBL-204ENST00000504430 NUDCQ9Y266 331 aa5.45□□□□□ -1.54
NIPBL-204ENST00000504430 COA3Q9Y2R0 106 aaPredicted RBP5.45□□□□□ -1.54
NIPBL-204ENST00000504430 CHTOPQ9Y3Y2 248 aaKnown RBP5.45□□□□□ -1.54
NIPBL-204ENST00000504430 KIF3AQ9Y496 699 aa5.45□□□□□ -1.54
NIPBL-204ENST00000504430 KCNE2Q9Y6J6 123 aa5.45□□□□□ -1.54
NIPBL-204ENST00000504430 ADGRF5Q8IZF2 1346 aa5.45□□□□□ -1.54
NIPBL-204ENST00000504430 AKNAQ7Z591 1439 aa5.45□□□□□ -1.54
NIPBL-204ENST00000504430 FAM90A20PA6NIJ5 464 aa5.45□□□□□ -1.54
NIPBL-204ENST00000504430 H0Y858 1186 aa5.45□□□□□ -1.54
NIPBL-204ENST00000504430 PSMA7O14818 248 aa5.45□□□□□ -1.54
NIPBL-204ENST00000504430 RNF113AO15541 343 aaKnown RBP5.45□□□□□ -1.54
NIPBL-204ENST00000504430 DNAJB5O75953 348 aa5.45□□□□□ -1.54
NIPBL-204ENST00000504430 FLOT1O75955 427 aa5.45□□□□□ -1.54
NIPBL-204ENST00000504430 TIAF1O95411 115 aa5.45□□□□□ -1.54
NIPBL-204ENST00000504430 CD72P21854 359 aa5.45□□□□□ -1.54
NIPBL-204ENST00000504430 WASP42768 502 aa5.45□□□□□ -1.54
NIPBL-204ENST00000504430 NRIP1P48552 1158 aa5.45□□□□□ -1.54
NIPBL-204ENST00000504430 PRKCEQ02156 737 aa5.45□□□□□ -1.54
NIPBL-204ENST00000504430 INAQ16352 499 aa5.45□□□□□ -1.54
NIPBL-204ENST00000504430 LETM2Q2VYF4 491 aa5.45□□□□□ -1.54
NIPBL-204ENST00000504430 CYP20A1Q6UW02 462 aa5.45□□□□□ -1.54
NIPBL-204ENST00000504430 KIAA1324Q6UXG2 1013 aaKnown RBP5.45□□□□□ -1.54
NIPBL-204ENST00000504430 TMEM200AQ86VY9 491 aa5.45□□□□□ -1.54
NIPBL-204ENST00000504430 DHX40Q8IX18 779 aaKnown RBP5.45□□□□□ -1.54
NIPBL-204ENST00000504430 MRPL43Q8N983 215 aaKnown RBP5.45□□□□□ -1.54
NIPBL-204ENST00000504430 HASPINQ8TF76 798 aa5.45□□□□□ -1.54
NIPBL-204ENST00000504430 CORO2AQ92828 525 aa5.45□□□□□ -1.54
NIPBL-204ENST00000504430 GRAMD1AQ96CP6 724 aa5.45□□□□□ -1.54
NIPBL-204ENST00000504430 SYT17Q9BSW7 474 aa5.45□□□□□ -1.54
NIPBL-204ENST00000504430 HEMGNQ9BXL5 484 aa5.45□□□□□ -1.54
NIPBL-204ENST00000504430 GLIS2Q9BZE0 524 aaPredicted RBP5.45□□□□□ -1.54
NIPBL-204ENST00000504430 TLR9Q9NR96 1032 aa5.45□□□□□ -1.54
NIPBL-204ENST00000504430 ATAD3AQ9NVI7 634 aa5.45□□□□□ -1.54
NIPBL-204ENST00000504430 TAS2R10Q9NYW0 307 aa5.45□□□□□ -1.54
NIPBL-204ENST00000504430 MORF4L1Q9UBU8 362 aa5.45□□□□□ -1.54
NIPBL-204ENST00000504430 WDR37Q9Y2I8 494 aa5.45□□□□□ -1.54
NIPBL-204ENST00000504430 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.45□□□□□ -1.54
NIPBL-204ENST00000504430 LYVE1Q9Y5Y7 322 aa5.45□□□□□ -1.54
NIPBL-204ENST00000504430 KDM3AQ9Y4C1 1321 aa5.45□□□□□ -1.54
NIPBL-204ENST00000504430 A0A0A6YYC8 382 aaPredicted RBP5.44□□□□□ -1.54
NIPBL-204ENST00000504430 GOLGA6L7A0A1B0GV03 622 aa5.44□□□□□ -1.54
NIPBL-204ENST00000504430 I3L1I5 382 aaPredicted RBP5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms