RNA–Protein interactions for RNA: ENST00000504195.1

HMGB3P17-201, Transcript of high mobility group box 3 pseudogene 17, humanhuman

BASIC

Gene HMGB3P17, Length 649 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P17-201ENST00000504195 TSPAN18Q96SJ8 248 aa2.37□□□□□ -2.03
HMGB3P17-201ENST00000504195 TTLL2Q9BWV7 592 aa2.37□□□□□ -2.03
HMGB3P17-201ENST00000504195 LRRC27Q9C0I9 530 aa2.37□□□□□ -2.03
HMGB3P17-201ENST00000504195 CDH19Q9H159 772 aa2.37□□□□□ -2.03
HMGB3P17-201ENST00000504195 FAM204AQ9H8W3 233 aa2.37□□□□□ -2.03
HMGB3P17-201ENST00000504195 THSD1Q9NS62 852 aa2.37□□□□□ -2.03
HMGB3P17-201ENST00000504195 ABHD10Q9NUJ1 306 aa2.37□□□□□ -2.03
HMGB3P17-201ENST00000504195 ASNSD1Q9NWL6 643 aa2.37□□□□□ -2.03
HMGB3P17-201ENST00000504195 COL20A1Q9P218 1284 aa2.37□□□□□ -2.03
HMGB3P17-201ENST00000504195 ZNF212Q9UDV6 495 aa2.37□□□□□ -2.03
HMGB3P17-201ENST00000504195 PRDM4Q9UKN5 801 aa2.37□□□□□ -2.03
HMGB3P17-201ENST00000504195 VPS4AQ9UN37 437 aa2.37□□□□□ -2.03
HMGB3P17-201ENST00000504195 L1RE1Q9UN81 338 aa2.37□□□□□ -2.03
HMGB3P17-201ENST00000504195 A0A0G2JK05 382 aa2.36□□□□□ -2.03
HMGB3P17-201ENST00000504195 DPPA5A6NC42 116 aa2.36□□□□□ -2.03
HMGB3P17-201ENST00000504195 GOLGA6L3A6NEY3 463 aa2.36□□□□□ -2.03
HMGB3P17-201ENST00000504195 H0YGN5 161 aa2.36□□□□□ -2.03
HMGB3P17-201ENST00000504195 EIF3JO75822 258 aaKnown RBP2.36□□□□□ -2.03
HMGB3P17-201ENST00000504195 KRT36O76013 467 aa2.36□□□□□ -2.03
HMGB3P17-201ENST00000504195 AKR1A1P14550 325 aa2.36□□□□□ -2.03
HMGB3P17-201ENST00000504195 HTR7P34969 479 aa2.36□□□□□ -2.03
HMGB3P17-201ENST00000504195 HOXD12P35452 270 aa2.36□□□□□ -2.03
HMGB3P17-201ENST00000504195 RFX2P48378 723 aa2.36□□□□□ -2.03
HMGB3P17-201ENST00000504195 RAB27AP51159 221 aa2.36□□□□□ -2.03
HMGB3P17-201ENST00000504195 MTAPQ13126 283 aa2.36□□□□□ -2.03
HMGB3P17-201ENST00000504195 KCNJ12Q14500 433 aa2.36□□□□□ -2.03
HMGB3P17-201ENST00000504195 ACOX1Q15067 660 aa2.36□□□□□ -2.03
HMGB3P17-201ENST00000504195 SMTNL2Q2TAL5 461 aa2.36□□□□□ -2.03
HMGB3P17-201ENST00000504195 AASDHQ4L235 1098 aaPredicted RBP2.36□□□□□ -2.03
HMGB3P17-201ENST00000504195 NUGGCQ68CJ6 796 aa2.36□□□□□ -2.03
HMGB3P17-201ENST00000504195 CXorf57Q6NSI4 855 aaKnown RBP2.36□□□□□ -2.03
HMGB3P17-201ENST00000504195 ADAM5Q6NVV9 412 aa2.36□□□□□ -2.03
HMGB3P17-201ENST00000504195 KRBA2Q6ZNG9 492 aa2.36□□□□□ -2.03
HMGB3P17-201ENST00000504195 LSM14AQ8ND56 463 aaKnown RBP2.36□□□□□ -2.03
HMGB3P17-201ENST00000504195 MORC4Q8TE76 937 aa2.36□□□□□ -2.03
HMGB3P17-201ENST00000504195 RUNDC1Q96C34 613 aa2.36□□□□□ -2.03
HMGB3P17-201ENST00000504195 MSI2Q96DH6 328 aaKnown RBP2.36□□□□□ -2.03
HMGB3P17-201ENST00000504195 INPP4AQ96PE3 977 aaPredicted RBP2.36□□□□□ -2.03
HMGB3P17-201ENST00000504195 SELENOOQ9BVL4 669 aa2.36□□□□□ -2.03
HMGB3P17-201ENST00000504195 TRIM2Q9C040 744 aa2.36□□□□□ -2.03
HMGB3P17-201ENST00000504195 SLC25A32Q9H2D1 315 aa2.36□□□□□ -2.03
HMGB3P17-201ENST00000504195 TASP1Q9H6P5 420 aa2.36□□□□□ -2.03
HMGB3P17-201ENST00000504195 MYO6Q9UM54 1294 aa2.36□□□□□ -2.03
HMGB3P17-201ENST00000504195 CAPN11Q9UMQ6 739 aa2.36□□□□□ -2.03
HMGB3P17-201ENST00000504195 PCDHB2Q9Y5E7 798 aa2.36□□□□□ -2.03
HMGB3P17-201ENST00000504195 ZCCHC6Q5VYS8 1495 aaKnown RBP2.36□□□□□ -2.03
HMGB3P17-201ENST00000504195 RPS10-NUDT3A0A1W2PQS6 291 aa2.35□□□□□ -2.03
HMGB3P17-201ENST00000504195 PRYO14603 147 aa2.35□□□□□ -2.03
HMGB3P17-201ENST00000504195 MGEA5O60502 916 aa2.35□□□□□ -2.03
HMGB3P17-201ENST00000504195 ATG13O75143 517 aa2.35□□□□□ -2.03
HMGB3P17-201ENST00000504195 DDNO94850 711 aaPredicted RBP2.35□□□□□ -2.03
HMGB3P17-201ENST00000504195 SGPL1O95470 568 aa2.35□□□□□ -2.03
HMGB3P17-201ENST00000504195 HSP90AA1P07900 732 aaKnown RBP2.35□□□□□ -2.03
HMGB3P17-201ENST00000504195 PDGFRBP09619 1106 aa2.35□□□□□ -2.03
HMGB3P17-201ENST00000504195 MATN1P21941 496 aa2.35□□□□□ -2.03
HMGB3P17-201ENST00000504195 MMP8P22894 467 aa2.35□□□□□ -2.03
HMGB3P17-201ENST00000504195 NDUFS1P28331 727 aa2.35□□□□□ -2.03
HMGB3P17-201ENST00000504195 HOXC13P31276 330 aa2.35□□□□□ -2.03
HMGB3P17-201ENST00000504195 PBX1P40424 430 aa2.35□□□□□ -2.03
HMGB3P17-201ENST00000504195 SOX2P48431 317 aa2.35□□□□□ -2.03
HMGB3P17-201ENST00000504195 EPHB1P54762 984 aa2.35□□□□□ -2.03
HMGB3P17-201ENST00000504195 GAD2Q05329 585 aa2.35□□□□□ -2.03
HMGB3P17-201ENST00000504195 ZKSCAN8Q15776 578 aaPredicted RBP2.35□□□□□ -2.03
HMGB3P17-201ENST00000504195 CCDC96Q2M329 555 aa2.35□□□□□ -2.03
HMGB3P17-201ENST00000504195 KIAA1755Q5JYT7 1200 aa2.35□□□□□ -2.03
HMGB3P17-201ENST00000504195 PIK3CD-AS1Q5SR53 167 aa2.35□□□□□ -2.03
HMGB3P17-201ENST00000504195 C6orf10Q5SRN2 563 aa2.35□□□□□ -2.03
HMGB3P17-201ENST00000504195 LIPMQ5VYY2 423 aa2.35□□□□□ -2.03
HMGB3P17-201ENST00000504195 ISM2Q6H9L7 571 aa2.35□□□□□ -2.03
HMGB3P17-201ENST00000504195 TRILQ7L0X0 811 aa2.35□□□□□ -2.03
HMGB3P17-201ENST00000504195 SH2D6Q7Z4S9 175 aa2.35□□□□□ -2.03
HMGB3P17-201ENST00000504195 NBPF5PQ86XG9 351 aaPredicted RBP2.35□□□□□ -2.03
HMGB3P17-201ENST00000504195 EGFL6Q8IUX8 553 aa2.35□□□□□ -2.03
HMGB3P17-201ENST00000504195 SMC5Q8IY18 1101 aa2.35□□□□□ -2.03
HMGB3P17-201ENST00000504195 SUN3Q8TAQ9 357 aa2.35□□□□□ -2.03
HMGB3P17-201ENST00000504195 ABHD5Q8WTS1 349 aa2.35□□□□□ -2.03
HMGB3P17-201ENST00000504195 LRTOMTQ8WZ04 291 aa2.35□□□□□ -2.03
HMGB3P17-201ENST00000504195 PMM1Q92871 262 aa2.35□□□□□ -2.03
HMGB3P17-201ENST00000504195 GJA10Q969M2 543 aa2.35□□□□□ -2.03
HMGB3P17-201ENST00000504195 APIPQ96GX9 242 aa2.35□□□□□ -2.03
HMGB3P17-201ENST00000504195 SNX22Q96L94 193 aa2.35□□□□□ -2.03
HMGB3P17-201ENST00000504195 MAP7D2Q96T17 732 aa2.35□□□□□ -2.03
HMGB3P17-201ENST00000504195 WDR83Q9BRX9 315 aaKnown RBP2.35□□□□□ -2.03
HMGB3P17-201ENST00000504195 PIMREGQ9BSJ6 248 aa2.35□□□□□ -2.03
HMGB3P17-201ENST00000504195 PDCL3Q9H2J4 239 aa2.35□□□□□ -2.03
HMGB3P17-201ENST00000504195 ERVK-5Q9HDB9 667 aa2.35□□□□□ -2.03
HMGB3P17-201ENST00000504195 C1orf112Q9NSG2 853 aa2.35□□□□□ -2.03
HMGB3P17-201ENST00000504195 RBM28Q9NW13 759 aaKnown RBP2.35□□□□□ -2.03
HMGB3P17-201ENST00000504195 GEMIN8Q9NWZ8 242 aaKnown RBP2.35□□□□□ -2.03
HMGB3P17-201ENST00000504195 NCKIPSDQ9NZQ3 722 aa2.35□□□□□ -2.03
HMGB3P17-201ENST00000504195 RAI14Q9P0K7 980 aa2.35□□□□□ -2.03
HMGB3P17-201ENST00000504195 SPATA31A5Q5VU36 1347 aa2.35□□□□□ -2.03
HMGB3P17-201ENST00000504195 EMSYQ7Z589 1322 aa2.35□□□□□ -2.03
HMGB3P17-201ENST00000504195 SPATA31A7Q8IWB4 1347 aa2.35□□□□□ -2.03
HMGB3P17-201ENST00000504195 IGKV3D-20A0A0C4DH25 116 aa2.34□□□□□ -2.03
HMGB3P17-201ENST00000504195 IGKV6D-41A0A0C4DH26 115 aa2.34□□□□□ -2.03
HMGB3P17-201ENST00000504195 A6NNZ2 444 aa2.34□□□□□ -2.03
HMGB3P17-201ENST00000504195 SMTNL1A8MU46 457 aa2.34□□□□□ -2.03
HMGB3P17-201ENST00000504195 CCNT2O60583 730 aaKnown RBP2.34□□□□□ -2.03
HMGB3P17-201ENST00000504195 MT-ND5P03915 603 aa2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms