RNA–Protein interactions for RNA: ENST00000504047.1

ATXN3-208, Transcript of ataxin 3, humanhuman

TSL 3

Gene ATXN3, Length 426 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-208ENST00000504047 RHPN2Q8IUC4 686 aa3.48□□□□□ -1.85
ATXN3-208ENST00000504047 CCDC117Q8IWD4 279 aaPredicted RBP3.48□□□□□ -1.85
ATXN3-208ENST00000504047 TBC1D3Q8IZP1 549 aaPredicted RBP3.48□□□□□ -1.85
ATXN3-208ENST00000504047 OR4N4Q8N0Y3 316 aa3.48□□□□□ -1.85
ATXN3-208ENST00000504047 HMGB4Q8WW32 186 aa3.48□□□□□ -1.85
ATXN3-208ENST00000504047 ZFPM2Q8WW38 1151 aa3.48□□□□□ -1.85
ATXN3-208ENST00000504047 EID2BQ96D98 161 aa3.48□□□□□ -1.85
ATXN3-208ENST00000504047 GPR78Q96P69 363 aa3.48□□□□□ -1.85
ATXN3-208ENST00000504047 RTKNQ9BST9 563 aa3.48□□□□□ -1.85
ATXN3-208ENST00000504047 CRB3Q9BUF7 120 aa3.48□□□□□ -1.85
ATXN3-208ENST00000504047 ABHD14AQ9BUJ0 271 aa3.48□□□□□ -1.85
ATXN3-208ENST00000504047 HTATIP2Q9BUP3 242 aa3.48□□□□□ -1.85
ATXN3-208ENST00000504047 KATNAL1Q9BW62 490 aa3.48□□□□□ -1.85
ATXN3-208ENST00000504047 SCNM1Q9BWG6 230 aa3.48□□□□□ -1.85
ATXN3-208ENST00000504047 SFXN1Q9H9B4 322 aa3.48□□□□□ -1.85
ATXN3-208ENST00000504047 PAPOLBQ9NRJ5 636 aaKnown RBP3.48□□□□□ -1.85
ATXN3-208ENST00000504047 LIN7CQ9NUP9 197 aaKnown RBP3.48□□□□□ -1.85
ATXN3-208ENST00000504047 LRFN1Q9P244 771 aa3.48□□□□□ -1.85
ATXN3-208ENST00000504047 HERC5Q9UII4 1024 aaKnown RBP3.48□□□□□ -1.85
ATXN3-208ENST00000504047 B3GNT3Q9Y2A9 372 aa3.48□□□□□ -1.85
ATXN3-208ENST00000504047 DAAM1Q9Y4D1 1078 aa3.48□□□□□ -1.85
ATXN3-208ENST00000504047 KIF28PB7ZC32 967 aa3.47□□□□□ -1.85
ATXN3-208ENST00000504047 PRPF4O43172 522 aaKnown RBP eCLIP3.47□□□□□ -1.85
ATXN3-208ENST00000504047 CNOT3O75175 753 aaKnown RBP3.47□□□□□ -1.85
ATXN3-208ENST00000504047 CNTN5O94779 1100 aa3.47□□□□□ -1.85
ATXN3-208ENST00000504047 TNFRSF6BO95407 300 aa3.47□□□□□ -1.85
ATXN3-208ENST00000504047 ME1P48163 572 aa3.47□□□□□ -1.85
ATXN3-208ENST00000504047 SOX2P48431 317 aa3.47□□□□□ -1.85
ATXN3-208ENST00000504047 SLC37A1P57057 533 aa3.47□□□□□ -1.85
ATXN3-208ENST00000504047 RBM6P78332 1123 aaKnown RBP3.47□□□□□ -1.85
ATXN3-208ENST00000504047 RNASELQ05823 741 aaKnown RBP3.47□□□□□ -1.85
ATXN3-208ENST00000504047 SF3A3Q12874 501 aaKnown RBP eCLIP3.47□□□□□ -1.85
ATXN3-208ENST00000504047 CHAF1AQ13111 956 aaPredicted RBP3.47□□□□□ -1.85
ATXN3-208ENST00000504047 BLMHQ13867 455 aa3.47□□□□□ -1.85
ATXN3-208ENST00000504047 RPS6KA2Q15349 733 aa3.47□□□□□ -1.85
ATXN3-208ENST00000504047 TWIST1Q15672 202 aa3.47□□□□□ -1.85
ATXN3-208ENST00000504047 TBRG1Q3YBR2 411 aa3.47□□□□□ -1.85
ATXN3-208ENST00000504047 TRIM60Q495X7 471 aa3.47□□□□□ -1.85
ATXN3-208ENST00000504047 EPHA10Q5JZY3 1008 aa3.47□□□□□ -1.85
ATXN3-208ENST00000504047 NFRKBQ6P4R8 1299 aa3.47□□□□□ -1.85
ATXN3-208ENST00000504047 LRIG3Q6UXM1 1119 aa3.47□□□□□ -1.85
ATXN3-208ENST00000504047 SUGP2Q8IX01 1082 aaKnown RBP eCLIP3.47□□□□□ -1.85
ATXN3-208ENST00000504047 ARFGAP1Q8N6T3 406 aa3.47□□□□□ -1.85
ATXN3-208ENST00000504047 ATG16L2Q8NAA4 619 aa3.47□□□□□ -1.85
ATXN3-208ENST00000504047 MPLKIPQ8TAP9 179 aa3.47□□□□□ -1.85
ATXN3-208ENST00000504047 MCRS1Q96EZ8 462 aa3.47□□□□□ -1.85
ATXN3-208ENST00000504047 ZFYVE19Q96K21 471 aa3.47□□□□□ -1.85
ATXN3-208ENST00000504047 TMEM120AQ9BXJ8 343 aa3.47□□□□□ -1.85
ATXN3-208ENST00000504047 BRD8Q9H0E9 1235 aa3.47□□□□□ -1.85
ATXN3-208ENST00000504047 MOV10Q9HCE1 1003 aaKnown RBP3.47□□□□□ -1.85
ATXN3-208ENST00000504047 POT1Q9NUX5 634 aa3.47□□□□□ -1.85
ATXN3-208ENST00000504047 DACT1Q9NYF0 836 aa3.47□□□□□ -1.85
ATXN3-208ENST00000504047 RAB21Q9UL25 225 aa3.47□□□□□ -1.85
ATXN3-208ENST00000504047 TRPC5Q9UL62 973 aaPredicted RBP3.47□□□□□ -1.85
ATXN3-208ENST00000504047 SLC12A4Q9UP95 1085 aa3.47□□□□□ -1.85
ATXN3-208ENST00000504047 ZBTB1Q9Y2K1 713 aa3.47□□□□□ -1.85
ATXN3-208ENST00000504047 AFG3L2Q9Y4W6 797 aa3.47□□□□□ -1.85
ATXN3-208ENST00000504047 HS3ST3B1Q9Y662 390 aa3.47□□□□□ -1.85
ATXN3-208ENST00000504047 MYMKA6NI61 221 aa3.46□□□□□ -1.86
ATXN3-208ENST00000504047 MBD3L5A6NJ08 208 aaPredicted RBP3.46□□□□□ -1.86
ATXN3-208ENST00000504047 M0QYT0 321 aa3.46□□□□□ -1.86
ATXN3-208ENST00000504047 UGDHO60701 494 aa3.46□□□□□ -1.86
ATXN3-208ENST00000504047 PPP6R2O75170 966 aa3.46□□□□□ -1.86
ATXN3-208ENST00000504047 ACTL6BO94805 426 aa3.46□□□□□ -1.86
ATXN3-208ENST00000504047 CSTBP04080 98 aaKnown RBP3.46□□□□□ -1.86
ATXN3-208ENST00000504047 IGKV2-30P06310 120 aa3.46□□□□□ -1.86
ATXN3-208ENST00000504047 CYP3A4P08684 503 aa3.46□□□□□ -1.86
ATXN3-208ENST00000504047 RFPL3SP0C7P2 107 aa3.46□□□□□ -1.86
ATXN3-208ENST00000504047 CYP19A1P11511 503 aaPredicted RBP3.46□□□□□ -1.86
ATXN3-208ENST00000504047 PRF1P14222 555 aa3.46□□□□□ -1.86
ATXN3-208ENST00000504047 PDIA3P30101 505 aaKnown RBP3.46□□□□□ -1.86
ATXN3-208ENST00000504047 SERPINF1P36955 418 aa3.46□□□□□ -1.86
ATXN3-208ENST00000504047 NR4A2P43354 598 aa3.46□□□□□ -1.86
ATXN3-208ENST00000504047 CCT4P50991 539 aaKnown RBP3.46□□□□□ -1.86
ATXN3-208ENST00000504047 TAS2R50P59544 299 aa3.46□□□□□ -1.86
ATXN3-208ENST00000504047 RPL15P61313 204 aaKnown RBP3.46□□□□□ -1.86
ATXN3-208ENST00000504047 AP2B1P63010 937 aa3.46□□□□□ -1.86
ATXN3-208ENST00000504047 B4GALNT1Q00973 533 aa3.46□□□□□ -1.86
ATXN3-208ENST00000504047 BTBD16Q32M84 506 aa3.46□□□□□ -1.86
ATXN3-208ENST00000504047 CCDC38Q502W7 563 aa3.46□□□□□ -1.86
ATXN3-208ENST00000504047 ISM2Q6H9L7 571 aa3.46□□□□□ -1.86
ATXN3-208ENST00000504047 ZNF474Q6S9Z5 364 aaPredicted RBP3.46□□□□□ -1.86
ATXN3-208ENST00000504047 PIM3Q86V86 326 aa3.46□□□□□ -1.86
ATXN3-208ENST00000504047 SPICE1Q8N0Z3 855 aa3.46□□□□□ -1.86
ATXN3-208ENST00000504047 ENAHQ8N8S7 591 aaPredicted RBP3.46□□□□□ -1.86
ATXN3-208ENST00000504047 SLC44A5Q8NCS7 719 aa3.46□□□□□ -1.86
ATXN3-208ENST00000504047 VPS37AQ8NEZ2 397 aa3.46□□□□□ -1.86
ATXN3-208ENST00000504047 POF1BQ8WVV4 589 aa3.46□□□□□ -1.86
ATXN3-208ENST00000504047 CPT1BQ92523 772 aa3.46□□□□□ -1.86
ATXN3-208ENST00000504047 ZNF48Q96MX3 618 aaPredicted RBP3.46□□□□□ -1.86
ATXN3-208ENST00000504047 RMDN3Q96TC7 470 aa3.46□□□□□ -1.86
ATXN3-208ENST00000504047 GATA5Q9BWX5 397 aaPredicted RBP3.46□□□□□ -1.86
ATXN3-208ENST00000504047 FOXP1Q9H334 677 aaPredicted RBP3.46□□□□□ -1.86
ATXN3-208ENST00000504047 MLXIPLQ9NP71 852 aa3.46□□□□□ -1.86
ATXN3-208ENST00000504047 TAGLN3Q9UI15 199 aa3.46□□□□□ -1.86
ATXN3-208ENST00000504047 C19orf53Q9UNZ5 99 aaPredicted RBP3.46□□□□□ -1.86
ATXN3-208ENST00000504047 CNTN6Q9UQ52 1028 aa3.46□□□□□ -1.86
ATXN3-208ENST00000504047 CYP3A7-CYP3A51PA0A087WV96 503 aa3.45□□□□□ -1.86
ATXN3-208ENST00000504047 SLC38A8A6NNN8 435 aa3.45□□□□□ -1.86
ATXN3-208ENST00000504047 TRIM38O00635 465 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms