RNA–Protein interactions for RNA: ENST00000503427.5

HMGXB3-202, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,275 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-202ENST00000503427 SPATA31C1P0DKV0 1188 aa16.53■□□□□ 0.24
HMGXB3-202ENST00000503427 NCF1P14598 390 aaPredicted RBP16.53■□□□□ 0.24
HMGXB3-202ENST00000503427 ZNF135P52742 658 aaPredicted RBP16.53■□□□□ 0.24
HMGXB3-202ENST00000503427 NME5P56597 212 aa16.53■□□□□ 0.24
HMGXB3-202ENST00000503427 SLC44A4Q53GD3 710 aa16.53■□□□□ 0.24
HMGXB3-202ENST00000503427 OTOAQ7RTW8 1153 aa16.53■□□□□ 0.24
HMGXB3-202ENST00000503427 GLIS3Q8NEA6 775 aa16.53■□□□□ 0.24
HMGXB3-202ENST00000503427 ZBTB10Q96DT7 871 aa16.53■□□□□ 0.24
HMGXB3-202ENST00000503427 PPP1R10Q96QC0 940 aaKnown RBP16.53■□□□□ 0.24
HMGXB3-202ENST00000503427 SYT17Q9BSW7 474 aa16.53■□□□□ 0.24
HMGXB3-202ENST00000503427 ZCWPW1Q9H0M4 648 aa16.53■□□□□ 0.24
HMGXB3-202ENST00000503427 PAPOLBQ9NRJ5 636 aaKnown RBP16.53■□□□□ 0.24
HMGXB3-202ENST00000503427 RBM22Q9NW64 420 aaKnown RBP eCLIP16.53■□□□□ 0.245e-12■■■■■ 55.7
HMGXB3-202ENST00000503427 KCNK4Q9NYG8 393 aa16.53■□□□□ 0.24
HMGXB3-202ENST00000503427 ANKRD6Q9Y2G4 727 aa16.53■□□□□ 0.24
HMGXB3-202ENST00000503427 USP20Q9Y2K6 914 aa16.53■□□□□ 0.24
HMGXB3-202ENST00000503427 CRABP2P29373 138 aa16.52■□□□□ 0.24
HMGXB3-202ENST00000503427 ATN1P54259 1190 aaPredicted RBP16.52■□□□□ 0.24
HMGXB3-202ENST00000503427 AUHQ13825 339 aaKnown RBP16.52■□□□□ 0.24
HMGXB3-202ENST00000503427 LRRC38Q5VT99 294 aa16.52■□□□□ 0.24
HMGXB3-202ENST00000503427 LRRC74BQ6ZQY2 392 aa16.52■□□□□ 0.24
HMGXB3-202ENST00000503427 CLPBQ9H078 707 aa16.52■□□□□ 0.24
HMGXB3-202ENST00000503427 PCDHB12Q9Y5F1 795 aa16.52■□□□□ 0.24
HMGXB3-202ENST00000503427 PARP4Q9UKK3 1724 aaKnown RBP16.52■□□□□ 0.24
HMGXB3-202ENST00000503427 A0A096LPK6 155 aa16.52■□□□□ 0.24
HMGXB3-202ENST00000503427 DNAJB2P25686 324 aa16.52■□□□□ 0.24
HMGXB3-202ENST00000503427 MGAT1P26572 445 aa16.52■□□□□ 0.24
HMGXB3-202ENST00000503427 MZF1P28698 734 aaPredicted RBP16.52■□□□□ 0.24
HMGXB3-202ENST00000503427 RAP1GDS1P52306 607 aa16.52■□□□□ 0.24
HMGXB3-202ENST00000503427 SLC6A3Q01959 620 aa16.52■□□□□ 0.24
HMGXB3-202ENST00000503427 ZFP1Q6P2D0 407 aa16.52■□□□□ 0.24
HMGXB3-202ENST00000503427 HERC6Q8IVU3 1022 aa16.52■□□□□ 0.24
HMGXB3-202ENST00000503427 DIS3LQ8TF46 1054 aaKnown RBP16.52■□□□□ 0.24
HMGXB3-202ENST00000503427 CACNA1FO60840 1977 aa16.52■□□□□ 0.23
HMGXB3-202ENST00000503427 CDH8P55286 799 aa16.52■□□□□ 0.23
HMGXB3-202ENST00000503427 FBXW4P57775 412 aa16.52■□□□□ 0.23
HMGXB3-202ENST00000503427 CYP51A1Q16850 503 aa16.52■□□□□ 0.23
HMGXB3-202ENST00000503427 PRMT9Q6P2P2 845 aa16.52■□□□□ 0.23
HMGXB3-202ENST00000503427 CATSPER2Q96P56 530 aa16.52■□□□□ 0.23
HMGXB3-202ENST00000503427 TAS2R14Q9NYV8 317 aa16.52■□□□□ 0.23
HMGXB3-202ENST00000503427 UBP1Q9NZI7 540 aa16.52■□□□□ 0.23
HMGXB3-202ENST00000503427 LTN1O94822 1766 aa16.52■□□□□ 0.23
HMGXB3-202ENST00000503427 TISP43B9A030 160 aa16.52■□□□□ 0.23
HMGXB3-202ENST00000503427 CSE1LP55060 971 aaKnown RBP16.52■□□□□ 0.23
HMGXB3-202ENST00000503427 PLIN5Q00G26 463 aa16.52■□□□□ 0.23
HMGXB3-202ENST00000503427 GDPD5Q8WTR4 605 aa16.52■□□□□ 0.23
HMGXB3-202ENST00000503427 PRDM16Q9HAZ2 1276 aa16.52■□□□□ 0.23
HMGXB3-202ENST00000503427 NT5MQ9NPB1 228 aa16.52■□□□□ 0.23
HMGXB3-202ENST00000503427 SCUBE2Q9NQ36 999 aa16.52■□□□□ 0.23
HMGXB3-202ENST00000503427 TIMM13Q9Y5L4 95 aaPredicted RBP16.52■□□□□ 0.23
HMGXB3-202ENST00000503427 NUDT17P0C025 328 aa16.51■□□□□ 0.23
HMGXB3-202ENST00000503427 ITGALP20701 1170 aa16.51■□□□□ 0.23
HMGXB3-202ENST00000503427 FASP25445 335 aa16.51■□□□□ 0.23
HMGXB3-202ENST00000503427 MAP2K5Q13163 448 aa16.51■□□□□ 0.23
HMGXB3-202ENST00000503427 LZTR1Q8N653 840 aa16.51■□□□□ 0.23
HMGXB3-202ENST00000503427 LNX1Q8TBB1 728 aaPredicted RBP16.51■□□□□ 0.23
HMGXB3-202ENST00000503427 UCMAQ8WVF2 138 aa16.51■□□□□ 0.23
HMGXB3-202ENST00000503427 LRRC19Q9H756 370 aa16.51■□□□□ 0.23
HMGXB3-202ENST00000503427 GIMAP4Q9NUV9 329 aa16.51■□□□□ 0.23
HMGXB3-202ENST00000503427 F8W810 466 aa16.51■□□□□ 0.23
HMGXB3-202ENST00000503427 RHOCP08134 193 aa16.51■□□□□ 0.23
HMGXB3-202ENST00000503427 KDELR1P24390 212 aa16.51■□□□□ 0.23
HMGXB3-202ENST00000503427 ACAT1P24752 427 aaKnown RBP16.51■□□□□ 0.23
HMGXB3-202ENST00000503427 AMPD2Q01433 879 aa16.51■□□□□ 0.23
HMGXB3-202ENST00000503427 TBCELQ5QJ74 424 aa16.51■□□□□ 0.23
HMGXB3-202ENST00000503427 ZSWIM2Q8NEG5 633 aa16.51■□□□□ 0.23
HMGXB3-202ENST00000503427 SPATA20Q8TB22 786 aa16.51■□□□□ 0.23
HMGXB3-202ENST00000503427 SLC2A14Q8TDB8 520 aa16.51■□□□□ 0.23
HMGXB3-202ENST00000503427 VPS33AQ96AX1 596 aa16.51■□□□□ 0.23
HMGXB3-202ENST00000503427 PHF21AQ96BD5 680 aa16.51■□□□□ 0.23
HMGXB3-202ENST00000503427 EPS8L2Q9H6S3 715 aa16.51■□□□□ 0.23
HMGXB3-202ENST00000503427 POLG2Q9UHN1 485 aa16.51■□□□□ 0.23
HMGXB3-202ENST00000503427 CARNS1A5YM72 827 aa16.51■□□□□ 0.23
HMGXB3-202ENST00000503427 TBKBP1A7MCY6 615 aa16.51■□□□□ 0.23
HMGXB3-202ENST00000503427 F8VP50 259 aa16.51■□□□□ 0.23
HMGXB3-202ENST00000503427 RAD23AP54725 363 aa16.51■□□□□ 0.23
HMGXB3-202ENST00000503427 HPCAP84074 193 aa16.51■□□□□ 0.23
HMGXB3-202ENST00000503427 IRGCQ6NXR0 463 aa16.51■□□□□ 0.23
HMGXB3-202ENST00000503427 COPS5Q92905 334 aa16.51■□□□□ 0.23
HMGXB3-202ENST00000503427 SERPINB11Q96P15 392 aa16.51■□□□□ 0.23
HMGXB3-202ENST00000503427 TMEM79Q9BSE2 394 aa16.51■□□□□ 0.23
HMGXB3-202ENST00000503427 ENTPD7Q9NQZ7 604 aa16.51■□□□□ 0.23
HMGXB3-202ENST00000503427 CTNNAL1Q9UBT7 734 aa16.51■□□□□ 0.23
HMGXB3-202ENST00000503427 CROTQ9UKG9 612 aa16.51■□□□□ 0.23
HMGXB3-202ENST00000503427 ABHD2P08910 425 aa16.51■□□□□ 0.23
HMGXB3-202ENST00000503427 OCM2P0CE71 109 aa16.51■□□□□ 0.23
HMGXB3-202ENST00000503427 OCMP0CE72 109 aaPredicted RBP16.51■□□□□ 0.23
HMGXB3-202ENST00000503427 AMPD1P23109 780 aa16.51■□□□□ 0.23
HMGXB3-202ENST00000503427 NCKAP1LP55160 1127 aa16.51■□□□□ 0.23
HMGXB3-202ENST00000503427 POU6F1Q14863 301 aa16.51■□□□□ 0.23
HMGXB3-202ENST00000503427 FAM71AQ8IYT1 594 aa16.51■□□□□ 0.23
HMGXB3-202ENST00000503427 ELMO3Q96BJ8 720 aa16.51■□□□□ 0.23
HMGXB3-202ENST00000503427 NMD3Q96D46 503 aaKnown RBP16.51■□□□□ 0.23
HMGXB3-202ENST00000503427 ABHD8Q96I13 439 aa16.51■□□□□ 0.23
HMGXB3-202ENST00000503427 INPP4AQ96PE3 977 aaPredicted RBP16.51■□□□□ 0.23
HMGXB3-202ENST00000503427 COL14A1Q05707 1796 aaKnown RBP16.5■□□□□ 0.23
HMGXB3-202ENST00000503427 SLURP2P0DP57 97 aa16.5■□□□□ 0.23
HMGXB3-202ENST00000503427 MYBL2P10244 700 aa16.5■□□□□ 0.23
HMGXB3-202ENST00000503427 UBE3AQ05086 875 aa16.5■□□□□ 0.23
HMGXB3-202ENST00000503427 MARC1Q5VT66 337 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms