RNA–Protein interactions for RNA: ENST00000503274.1

NIPBL-203, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 5

Gene NIPBL, Length 789 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-203ENST00000503274 FAR2Q96K12 515 aa6.58□□□□□ -1.36
NIPBL-203ENST00000503274 ARPC5LQ9BPX5 153 aa6.58□□□□□ -1.36
NIPBL-203ENST00000503274 NUAK2Q9H093 628 aa6.58□□□□□ -1.36
NIPBL-203ENST00000503274 KCNK9Q9NPC2 374 aa6.58□□□□□ -1.36
NIPBL-203ENST00000503274 HERC5Q9UII4 1024 aaKnown RBP6.58□□□□□ -1.36
NIPBL-203ENST00000503274 ATP7AQ04656 1500 aa6.58□□□□□ -1.36
NIPBL-203ENST00000503274 RTEL1-TNFRSF6BF6WH68 1400 aa6.58□□□□□ -1.36
NIPBL-203ENST00000503274 NPATQ14207 1427 aa6.58□□□□□ -1.36
NIPBL-203ENST00000503274 FNDC1Q4ZHG4 1894 aaPredicted RBP6.58□□□□□ -1.36
NIPBL-203ENST00000503274 ZNF644Q9H582 1327 aaPredicted RBP6.57□□□□□ -1.36
NIPBL-203ENST00000503274 ACKR2O00590 384 aa6.57□□□□□ -1.36
NIPBL-203ENST00000503274 TRIM38O00635 465 aa6.57□□□□□ -1.36
NIPBL-203ENST00000503274 EPHB2P29323 1055 aa6.57□□□□□ -1.36
NIPBL-203ENST00000503274 GAB1Q13480 694 aa6.57□□□□□ -1.36
NIPBL-203ENST00000503274 KPNB1Q14974 876 aaKnown RBP6.57□□□□□ -1.36
NIPBL-203ENST00000503274 COLEC12Q5KU26 742 aa6.57□□□□□ -1.36
NIPBL-203ENST00000503274 ATPAF1Q5TC12 328 aaPredicted RBP6.57□□□□□ -1.36
NIPBL-203ENST00000503274 CCDC174Q6PII3 467 aa6.57□□□□□ -1.36
NIPBL-203ENST00000503274 KYAT3Q6YP21 454 aaKnown RBP6.57□□□□□ -1.36
NIPBL-203ENST00000503274 OR1N1Q8NGS0 311 aa6.57□□□□□ -1.36
NIPBL-203ENST00000503274 OSR1Q8TAX0 266 aaPredicted RBP6.57□□□□□ -1.36
NIPBL-203ENST00000503274 SH2D3AQ9BRG2 576 aa6.57□□□□□ -1.36
NIPBL-203ENST00000503274 ELOVL1Q9BW60 279 aa6.57□□□□□ -1.36
NIPBL-203ENST00000503274 ARL8BQ9NVJ2 186 aa6.57□□□□□ -1.36
NIPBL-203ENST00000503274 SIRT4Q9Y6E7 314 aaPredicted RBP6.57□□□□□ -1.36
NIPBL-203ENST00000503274 DHX29Q7Z478 1369 aaKnown RBP6.57□□□□□ -1.36
NIPBL-203ENST00000503274 C3P01024 1663 aa6.56□□□□□ -1.36
NIPBL-203ENST00000503274 LOC105369274A0A096LPK9 316 aa6.56□□□□□ -1.36
NIPBL-203ENST00000503274 LOC102723532A0A0G2JNH3 316 aa6.56□□□□□ -1.36
NIPBL-203ENST00000503274 C16orf96A6NNT2 1141 aa6.56□□□□□ -1.36
NIPBL-203ENST00000503274 GYS1P13807 737 aa6.56□□□□□ -1.36
NIPBL-203ENST00000503274 THBS4P35443 961 aa6.56□□□□□ -1.36
NIPBL-203ENST00000503274 HOXD12P35452 270 aa6.56□□□□□ -1.36
NIPBL-203ENST00000503274 VPS41P49754 854 aa6.56□□□□□ -1.36
NIPBL-203ENST00000503274 AGTR2P50052 363 aa6.56□□□□□ -1.36
NIPBL-203ENST00000503274 ZNF268Q14587 947 aaPredicted RBP6.56□□□□□ -1.36
NIPBL-203ENST00000503274 SEC23BQ15437 767 aa6.56□□□□□ -1.36
NIPBL-203ENST00000503274 FAM110CQ1W6H9 321 aa6.56□□□□□ -1.36
NIPBL-203ENST00000503274 AAK1Q2M2I8 961 aa6.56□□□□□ -1.36
NIPBL-203ENST00000503274 TUBB8Q3ZCM7 444 aa6.56□□□□□ -1.36
NIPBL-203ENST00000503274 TRIM60Q495X7 471 aa6.56□□□□□ -1.36
NIPBL-203ENST00000503274 FAM83BQ5T0W9 1011 aa6.56□□□□□ -1.36
NIPBL-203ENST00000503274 KLHL17Q6TDP4 642 aa6.56□□□□□ -1.36
NIPBL-203ENST00000503274 CACNA2D3Q8IZS8 1091 aa6.56□□□□□ -1.36
NIPBL-203ENST00000503274 OR4N4Q8N0Y3 316 aa6.56□□□□□ -1.36
NIPBL-203ENST00000503274 MAP4K1Q92918 833 aa6.56□□□□□ -1.36
NIPBL-203ENST00000503274 LTV1Q96GA3 475 aaPredicted RBP6.56□□□□□ -1.36
NIPBL-203ENST00000503274 RTKNQ9BST9 563 aa6.56□□□□□ -1.36
NIPBL-203ENST00000503274 QTRT1Q9BXR0 403 aaKnown RBP6.56□□□□□ -1.36
NIPBL-203ENST00000503274 PDGFCQ9NRA1 345 aa6.56□□□□□ -1.36
NIPBL-203ENST00000503274 PTPRTO14522 1441 aa6.56□□□□□ -1.36
NIPBL-203ENST00000503274 SUPT6HQ7KZ85 1726 aaKnown RBP6.56□□□□□ -1.36
NIPBL-203ENST00000503274 MROH2AA6NES4 1674 aa6.55□□□□□ -1.36
NIPBL-203ENST00000503274 NCOA2Q15596 1464 aa6.55□□□□□ -1.36
NIPBL-203ENST00000503274 KIF28PB7ZC32 967 aa6.55□□□□□ -1.36
NIPBL-203ENST00000503274 PRYO14603 147 aa6.55□□□□□ -1.36
NIPBL-203ENST00000503274 DSCR3O14972 297 aa6.55□□□□□ -1.36
NIPBL-203ENST00000503274 NDUFS1P28331 727 aa6.55□□□□□ -1.36
NIPBL-203ENST00000503274 TACR3P29371 465 aa6.55□□□□□ -1.36
NIPBL-203ENST00000503274 SLC8A1P32418 973 aa6.55□□□□□ -1.36
NIPBL-203ENST00000503274 CHKAP35790 457 aa6.55□□□□□ -1.36
NIPBL-203ENST00000503274 TRAPPC10P48553 1259 aa6.55□□□□□ -1.36
NIPBL-203ENST00000503274 PDCD2Q16342 344 aaPredicted RBP6.55□□□□□ -1.36
NIPBL-203ENST00000503274 SRSF7Q16629 238 aaKnown RBP eCLIP6.55□□□□□ -1.36
NIPBL-203ENST00000503274 BTBD16Q32M84 506 aa6.55□□□□□ -1.36
NIPBL-203ENST00000503274 ZNF569Q5MCW4 686 aa6.55□□□□□ -1.36
NIPBL-203ENST00000503274 MEX3CQ5U5Q3 659 aaKnown RBP6.55□□□□□ -1.36
NIPBL-203ENST00000503274 ANKRD40Q6AI12 368 aa6.55□□□□□ -1.36
NIPBL-203ENST00000503274 SLC18B1Q6NT16 456 aa6.55□□□□□ -1.36
NIPBL-203ENST00000503274 YTHDF3Q7Z739 585 aaKnown RBP6.55□□□□□ -1.36
NIPBL-203ENST00000503274 NEK8Q86SG6 692 aa6.55□□□□□ -1.36
NIPBL-203ENST00000503274 CCDC117Q8IWD4 279 aaPredicted RBP6.55□□□□□ -1.36
NIPBL-203ENST00000503274 LAS2Q8IYD9 372 aa6.55□□□□□ -1.36
NIPBL-203ENST00000503274 REXO5Q96IC2 774 aaKnown RBP6.55□□□□□ -1.36
NIPBL-203ENST00000503274 FAM118BQ9BPY3 351 aa6.55□□□□□ -1.36
NIPBL-203ENST00000503274 SENP7Q9BQF6 1050 aa6.55□□□□□ -1.36
NIPBL-203ENST00000503274 CCDC134Q9H6E4 229 aa6.55□□□□□ -1.36
NIPBL-203ENST00000503274 ASNSD1Q9NWL6 643 aa6.55□□□□□ -1.36
NIPBL-203ENST00000503274 CNTN6Q9UQ52 1028 aa6.55□□□□□ -1.36
NIPBL-203ENST00000503274 VPS8Q8N3P4 1428 aa6.55□□□□□ -1.36
NIPBL-203ENST00000503274 TIAM1Q13009 1591 aa6.55□□□□□ -1.36
NIPBL-203ENST00000503274 ADGBQ8N7X0 1667 aa6.55□□□□□ -1.36
NIPBL-203ENST00000503274 ARHGEF17Q96PE2 2063 aaPredicted RBP6.54□□□□□ -1.36
NIPBL-203ENST00000503274 CCDC141Q6ZP82 1450 aa6.54□□□□□ -1.36
NIPBL-203ENST00000503274 MBD5Q9P267 1494 aa6.54□□□□□ -1.36
NIPBL-203ENST00000503274 INO80Q9ULG1 1556 aaPredicted RBP6.54□□□□□ -1.36
NIPBL-203ENST00000503274 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.54□□□□□ -1.36
NIPBL-203ENST00000503274 SMIM35A0A1B0GVV1 85 aa6.54□□□□□ -1.36
NIPBL-203ENST00000503274 FAM90A18PA6NE21 464 aa6.54□□□□□ -1.36
NIPBL-203ENST00000503274 FAM90A16PA6NEW6 464 aa6.54□□□□□ -1.36
NIPBL-203ENST00000503274 FAM90A9PA6NNJ1 464 aa6.54□□□□□ -1.36
NIPBL-203ENST00000503274 FAM90A5PA8MXJ8 464 aa6.54□□□□□ -1.36
NIPBL-203ENST00000503274 M0QYT0 321 aa6.54□□□□□ -1.36
NIPBL-203ENST00000503274 NKX2-8O15522 239 aa6.54□□□□□ -1.36
NIPBL-203ENST00000503274 ACTL6BO94805 426 aa6.54□□□□□ -1.36
NIPBL-203ENST00000503274 LARGE1O95461 756 aa6.54□□□□□ -1.36
NIPBL-203ENST00000503274 FAM90A15PP0C7V4 464 aa6.54□□□□□ -1.36
NIPBL-203ENST00000503274 FAM90A14PP0C7W9 464 aa6.54□□□□□ -1.36
NIPBL-203ENST00000503274 PRR35P0CG20 571 aa6.54□□□□□ -1.36
NIPBL-203ENST00000503274 SFPQP23246 707 aaKnown RBP eCLIP6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms