RNA–Protein interactions for RNA: ENST00000503060.5

USP46-204, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5

Gene USP46, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-204ENST00000503060 KCNT2Q6UVM3 1135 aa11.94□□□□□ -0.5
USP46-204ENST00000503060 CD300LGQ6UXG3 332 aa11.94□□□□□ -0.5
USP46-204ENST00000503060 C4orf22Q6V702 233 aa11.94□□□□□ -0.5
USP46-204ENST00000503060 GPRIN1Q7Z2K8 1008 aa11.94□□□□□ -0.5
USP46-204ENST00000503060 CCDC110Q8TBZ0 833 aa11.94□□□□□ -0.5
USP46-204ENST00000503060 FBF1Q8TES7 1133 aa11.94□□□□□ -0.5
USP46-204ENST00000503060 KCNK16Q96T55 309 aa11.94□□□□□ -0.5
USP46-204ENST00000503060 FRMD8Q9BZ67 464 aaPredicted RBP11.94□□□□□ -0.5
USP46-204ENST00000503060 KLC2Q9H0B6 622 aa11.94□□□□□ -0.5
USP46-204ENST00000503060 ACSS3Q9H6R3 686 aa11.94□□□□□ -0.5
USP46-204ENST00000503060 CNGB3Q9NQW8 809 aa11.94□□□□□ -0.5
USP46-204ENST00000503060 TMEM30AQ9NV96 361 aa11.94□□□□□ -0.5
USP46-204ENST00000503060 DTLQ9NZJ0 730 aa11.94□□□□□ -0.5
USP46-204ENST00000503060 COX16Q9P0S2 106 aa11.94□□□□□ -0.5
USP46-204ENST00000503060 PSMC3IPQ9P2W1 217 aaPredicted RBP11.94□□□□□ -0.5
USP46-204ENST00000503060 CHMP2BQ9UQN3 213 aa11.94□□□□□ -0.5
USP46-204ENST00000503060 MFHAS1Q9Y4C4 1052 aa11.94□□□□□ -0.5
USP46-204ENST00000503060 THSD7BQ9C0I4 1608 aa11.94□□□□□ -0.5
USP46-204ENST00000503060 YJEFN3A6XGL0 299 aa11.94□□□□□ -0.5
USP46-204ENST00000503060 E7ENQ6 273 aa11.94□□□□□ -0.5
USP46-204ENST00000503060 H3BRJ5 948 aa11.94□□□□□ -0.5
USP46-204ENST00000503060 GCATO75600 419 aa11.94□□□□□ -0.5
USP46-204ENST00000503060 CABYRO75952 493 aa11.94□□□□□ -0.5
USP46-204ENST00000503060 CCNCP24863 283 aa11.94□□□□□ -0.5
USP46-204ENST00000503060 ELK3P41970 407 aa11.94□□□□□ -0.5
USP46-204ENST00000503060 BRCC3P46736 316 aa11.94□□□□□ -0.5
USP46-204ENST00000503060 NOGQ13253 232 aa11.94□□□□□ -0.5
USP46-204ENST00000503060 PKN2Q16513 984 aaKnown RBP11.94□□□□□ -0.5
USP46-204ENST00000503060 KLHL38Q2WGJ6 581 aa11.94□□□□□ -0.5
USP46-204ENST00000503060 FAXCQ5TGI0 409 aa11.94□□□□□ -0.5
USP46-204ENST00000503060 C16orf54Q6UWD8 224 aa11.94□□□□□ -0.5
USP46-204ENST00000503060 C6orf89Q6UWU4 347 aa11.94□□□□□ -0.5
USP46-204ENST00000503060 METTL23Q86XA0 190 aa11.94□□□□□ -0.5
USP46-204ENST00000503060 IGDCC3Q8IVU1 814 aa11.94□□□□□ -0.5
USP46-204ENST00000503060 CACNA2D3Q8IZS8 1091 aa11.94□□□□□ -0.5
USP46-204ENST00000503060 GSDMBQ8TAX9 411 aa11.94□□□□□ -0.5
USP46-204ENST00000503060 MYLPFQ96A32 169 aa11.94□□□□□ -0.5
USP46-204ENST00000503060 THOC1Q96FV9 657 aaKnown RBP11.94□□□□□ -0.5
USP46-204ENST00000503060 SMARCD1Q96GM5 515 aa11.94□□□□□ -0.5
USP46-204ENST00000503060 FAM167BQ9BTA0 163 aa11.94□□□□□ -0.5
USP46-204ENST00000503060 ETNK1Q9HBU6 452 aa11.94□□□□□ -0.5
USP46-204ENST00000503060 ARHGEF4Q9NR80 690 aa11.94□□□□□ -0.5
USP46-204ENST00000503060 NKIRAS1Q9NYS0 192 aa11.94□□□□□ -0.5
USP46-204ENST00000503060 INPP5FQ9Y2H2 1132 aa11.94□□□□□ -0.5
USP46-204ENST00000503060 HHLA1C9JL84 531 aa11.93□□□□□ -0.5
USP46-204ENST00000503060 CAPN9O14815 690 aa11.93□□□□□ -0.5
USP46-204ENST00000503060 DGKIO75912 1065 aa11.93□□□□□ -0.5
USP46-204ENST00000503060 B3GAT3O94766 335 aa11.93□□□□□ -0.5
USP46-204ENST00000503060 CYP11A1P05108 521 aa11.93□□□□□ -0.5
USP46-204ENST00000503060 SKIP12755 728 aa11.93□□□□□ -0.5
USP46-204ENST00000503060 ATP2A2P16615 1042 aaKnown RBP11.93□□□□□ -0.5
USP46-204ENST00000503060 KRT15P19012 456 aa11.93□□□□□ -0.5
USP46-204ENST00000503060 ACLYP53396 1101 aa11.93□□□□□ -0.5
USP46-204ENST00000503060 NME3Q13232 169 aa11.93□□□□□ -0.5
USP46-204ENST00000503060 TUSC3Q13454 348 aa11.93□□□□□ -0.5
USP46-204ENST00000503060 EFTUD2Q15029 972 aaKnown RBP eCLIP11.93□□□□□ -0.5
USP46-204ENST00000503060 PAN2Q504Q3 1202 aaKnown RBP11.93□□□□□ -0.5
USP46-204ENST00000503060 MAP3K21Q5TCX8 1036 aa11.93□□□□□ -0.5
USP46-204ENST00000503060 IRGCQ6NXR0 463 aa11.93□□□□□ -0.5
USP46-204ENST00000503060 NEK10Q6ZWH5 1172 aa11.93□□□□□ -0.5
USP46-204ENST00000503060 RNF180Q86T96 592 aa11.93□□□□□ -0.5
USP46-204ENST00000503060 ECHDC2Q86YB7 292 aa11.93□□□□□ -0.5
USP46-204ENST00000503060 LILRB2Q8N423 598 aa11.93□□□□□ -0.5
USP46-204ENST00000503060 CCDC33Q8N5R6 958 aa11.93□□□□□ -0.5
USP46-204ENST00000503060 SMC1BQ8NDV3 1235 aa11.93□□□□□ -0.5
USP46-204ENST00000503060 RNF139Q8WU17 664 aa11.93□□□□□ -0.5
USP46-204ENST00000503060 CKAP2Q8WWK9 683 aa11.93□□□□□ -0.5
USP46-204ENST00000503060 OLFM3Q96PB7 478 aa11.93□□□□□ -0.5
USP46-204ENST00000503060 DHRS4Q9BTZ2 278 aa11.93□□□□□ -0.5
USP46-204ENST00000503060 TRABDQ9H4I3 376 aa11.93□□□□□ -0.5
USP46-204ENST00000503060 MLXIPLQ9NP71 852 aa11.93□□□□□ -0.5
USP46-204ENST00000503060 TMPRSS4Q9NRS4 437 aa11.93□□□□□ -0.5
USP46-204ENST00000503060 PIGVQ9NUD9 493 aa11.93□□□□□ -0.5
USP46-204ENST00000503060 SENP1Q9P0U3 644 aa11.93□□□□□ -0.5
USP46-204ENST00000503060 TEX264Q9Y6I9 313 aa11.93□□□□□ -0.5
USP46-204ENST00000503060 SQORQ9Y6N5 450 aa11.93□□□□□ -0.5
USP46-204ENST00000503060 HACD1B0YJ81 288 aa11.92□□□□□ -0.5
USP46-204ENST00000503060 C9IYK1 514 aa11.92□□□□□ -0.5
USP46-204ENST00000503060 VIMP08670 466 aaKnown RBP11.92□□□□□ -0.5
USP46-204ENST00000503060 USP17L7P0C7H9 530 aa11.92□□□□□ -0.5
USP46-204ENST00000503060 INTS6LQ5JSJ4 861 aaKnown RBP11.92□□□□□ -0.5
USP46-204ENST00000503060 ARHGEF18Q6ZSZ5 1173 aa11.92□□□□□ -0.5
USP46-204ENST00000503060 SLC7A14Q8TBB6 771 aa11.92□□□□□ -0.5
USP46-204ENST00000503060 SLC9A7Q96T83 725 aa11.92□□□□□ -0.5
USP46-204ENST00000503060 SH3GL3Q99963 347 aa11.92□□□□□ -0.5
USP46-204ENST00000503060 ACBD6Q9BR61 282 aa11.92□□□□□ -0.5
USP46-204ENST00000503060 RHOBTB2Q9BYZ6 727 aa11.92□□□□□ -0.5
USP46-204ENST00000503060 CSNK1G1Q9HCP0 422 aa11.92□□□□□ -0.5
USP46-204ENST00000503060 ZNF304Q9HCX3 659 aa11.92□□□□□ -0.5
USP46-204ENST00000503060 SRRDQ9UH36 339 aa11.92□□□□□ -0.5
USP46-204ENST00000503060 TSC2P49815 1807 aa11.92□□□□□ -0.5
USP46-204ENST00000503060 FAM47DPA6NHR8 397 aa11.92□□□□□ -0.5
USP46-204ENST00000503060 M0QZQ0 153 aa11.92□□□□□ -0.5
USP46-204ENST00000503060 MFSD11O43934 449 aa11.92□□□□□ -0.5
USP46-204ENST00000503060 METTL18O95568 372 aa11.92□□□□□ -0.5
USP46-204ENST00000503060 HEATR6Q6AI08 1181 aaKnown RBP11.92□□□□□ -0.5
USP46-204ENST00000503060 FAM171BQ6P995 826 aa11.92□□□□□ -0.5
USP46-204ENST00000503060 BZW1Q7L1Q6 419 aaKnown RBP11.92□□□□□ -0.5
USP46-204ENST00000503060 ZNF598Q86UK7 904 aaKnown RBP11.92□□□□□ -0.5
USP46-204ENST00000503060 MCUQ8NE86 351 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms