RNA–Protein interactions for RNA: ENST00000498725.5

CCDC171-209, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 498 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-209ENST00000498725 CEP135Q66GS9 1140 aa9.51□□□□□ -0.89
CCDC171-209ENST00000498725 RFWD3Q6PCD5 774 aa9.51□□□□□ -0.89
CCDC171-209ENST00000498725 ADIPOR2Q86V24 386 aa9.51□□□□□ -0.89
CCDC171-209ENST00000498725 ERICH1Q86X53 443 aa9.51□□□□□ -0.89
CCDC171-209ENST00000498725 MMAAQ8IVH4 418 aaKnown RBP9.51□□□□□ -0.89
CCDC171-209ENST00000498725 SPNS2Q8IVW8 549 aa9.51□□□□□ -0.89
CCDC171-209ENST00000498725 WFIKKN2Q8TEU8 576 aa9.51□□□□□ -0.89
CCDC171-209ENST00000498725 EDEM1Q92611 657 aa9.51□□□□□ -0.89
CCDC171-209ENST00000498725 PLD4Q96BZ4 506 aa9.51□□□□□ -0.89
CCDC171-209ENST00000498725 SERAC1Q96JX3 654 aa9.51□□□□□ -0.89
CCDC171-209ENST00000498725 HEXIM2Q96MH2 286 aaKnown RBP9.51□□□□□ -0.89
CCDC171-209ENST00000498725 DUSP16Q9BY84 665 aa9.51□□□□□ -0.89
CCDC171-209ENST00000498725 PABPC3Q9H361 631 aaKnown RBP9.51□□□□□ -0.89
CCDC171-209ENST00000498725 CLMPQ9H6B4 373 aa9.51□□□□□ -0.89
CCDC171-209ENST00000498725 KBTBD4Q9NVX7 518 aa9.51□□□□□ -0.89
CCDC171-209ENST00000498725 WDR70Q9NW82 654 aa9.51□□□□□ -0.89
CCDC171-209ENST00000498725 PPP4R2Q9NY27 417 aa9.51□□□□□ -0.89
CCDC171-209ENST00000498725 SUN2Q9UH99 717 aa9.51□□□□□ -0.89
CCDC171-209ENST00000498725 PCDHB1Q9Y5F3 818 aa9.51□□□□□ -0.89
CCDC171-209ENST00000498725 PTPRQQ9UMZ3 2332 aa9.5□□□□□ -0.89
CCDC171-209ENST00000498725 ATMQ13315 3056 aa9.5□□□□□ -0.89
CCDC171-209ENST00000498725 ZNF462Q96JM2 2506 aa9.5□□□□□ -0.89
CCDC171-209ENST00000498725 CFAP46Q8IYW2 2715 aa9.5□□□□□ -0.89
CCDC171-209ENST00000498725 GOLGA6L7A0A1B0GV03 622 aa9.5□□□□□ -0.89
CCDC171-209ENST00000498725 LRRC72A6NJI9 287 aa9.5□□□□□ -0.89
CCDC171-209ENST00000498725 ERVH48-1M5A8F1 160 aa9.5□□□□□ -0.89
CCDC171-209ENST00000498725 MSI1O43347 362 aaKnown RBP9.5□□□□□ -0.89
CCDC171-209ENST00000498725 SLC28A2O43868 658 aa9.5□□□□□ -0.89
CCDC171-209ENST00000498725 RNASEH1O60930 286 aaKnown RBP9.5□□□□□ -0.89
CCDC171-209ENST00000498725 ASS1P00966 412 aaKnown RBP9.5□□□□□ -0.89
CCDC171-209ENST00000498725 MPOP05164 745 aa9.5□□□□□ -0.89
CCDC171-209ENST00000498725 ATP5BP06576 529 aaKnown RBP9.5□□□□□ -0.89
CCDC171-209ENST00000498725 DLDP09622 509 aaKnown RBP9.5□□□□□ -0.89
CCDC171-209ENST00000498725 CDK4P11802 303 aa9.5□□□□□ -0.89
CCDC171-209ENST00000498725 CKMT2P17540 419 aa9.5□□□□□ -0.89
CCDC171-209ENST00000498725 MAT2AP31153 395 aaKnown RBP9.5□□□□□ -0.89
CCDC171-209ENST00000498725 PSMD8P48556 350 aa9.5□□□□□ -0.89
CCDC171-209ENST00000498725 ARRB1P49407 418 aaPredicted RBP9.5□□□□□ -0.89
CCDC171-209ENST00000498725 TKTL1P51854 596 aa9.5□□□□□ -0.89
CCDC171-209ENST00000498725 TMPRSS3P57727 454 aa9.5□□□□□ -0.89
CCDC171-209ENST00000498725 ST8SIA6P61647 398 aa9.5□□□□□ -0.89
CCDC171-209ENST00000498725 SNRPFP62306 86 aaKnown RBP9.5□□□□□ -0.89
CCDC171-209ENST00000498725 DAB2P98082 770 aa9.5□□□□□ -0.89
CCDC171-209ENST00000498725 INSM1Q01101 510 aaPredicted RBP9.5□□□□□ -0.89
CCDC171-209ENST00000498725 KCNC4Q03721 635 aa9.5□□□□□ -0.89
CCDC171-209ENST00000498725 MMRN1Q13201 1228 aa9.5□□□□□ -0.89
CCDC171-209ENST00000498725 CST6Q15828 149 aa9.5□□□□□ -0.89
CCDC171-209ENST00000498725 E2F4Q16254 413 aa9.5□□□□□ -0.89
CCDC171-209ENST00000498725 ZACNQ401N2 412 aa9.5□□□□□ -0.89
CCDC171-209ENST00000498725 UNC13DQ70J99 1090 aa9.5□□□□□ -0.89
CCDC171-209ENST00000498725 SV2AQ7L0J3 742 aa9.5□□□□□ -0.89
CCDC171-209ENST00000498725 TMC6Q7Z403 805 aa9.5□□□□□ -0.89
CCDC171-209ENST00000498725 GRAMD1CQ8IYS0 662 aa9.5□□□□□ -0.89
CCDC171-209ENST00000498725 AHI1Q8N157 1196 aa9.5□□□□□ -0.89
CCDC171-209ENST00000498725 ARHGAP18Q8N392 663 aa9.5□□□□□ -0.89
CCDC171-209ENST00000498725 ZNF276Q8N554 614 aa9.5□□□□□ -0.89
CCDC171-209ENST00000498725 ZNF248Q8NDW4 579 aa9.5□□□□□ -0.89
CCDC171-209ENST00000498725 OR2T34Q8NGX1 318 aa9.5□□□□□ -0.89
CCDC171-209ENST00000498725 OR14C36Q8NHC7 312 aa9.5□□□□□ -0.89
CCDC171-209ENST00000498725 RNF139Q8WU17 664 aa9.5□□□□□ -0.89
CCDC171-209ENST00000498725 TSC1Q92574 1164 aa9.5□□□□□ -0.89
CCDC171-209ENST00000498725 TAF4BQ92750 862 aa9.5□□□□□ -0.89
CCDC171-209ENST00000498725 GOLGA1Q92805 767 aa9.5□□□□□ -0.89
CCDC171-209ENST00000498725 ULBP1Q9BZM6 244 aa9.5□□□□□ -0.89
CCDC171-209ENST00000498725 IMPG2Q9BZV3 1241 aa9.5□□□□□ -0.89
CCDC171-209ENST00000498725 RSPH9Q9H1X1 276 aaPredicted RBP9.5□□□□□ -0.89
CCDC171-209ENST00000498725 FBRSQ9HAH7 460 aa9.5□□□□□ -0.89
CCDC171-209ENST00000498725 APOBEC3GQ9HC16 384 aaKnown RBP9.5□□□□□ -0.89
CCDC171-209ENST00000498725 PNPLA8Q9NP80 782 aa9.5□□□□□ -0.89
CCDC171-209ENST00000498725 USP3Q9Y6I4 520 aa9.5□□□□□ -0.89
CCDC171-209ENST00000498725 MGAQ8IWI9 3026 aa9.49□□□□□ -0.89
CCDC171-209ENST00000498725 TBC1D3DA0A087WVF3 549 aa9.49□□□□□ -0.89
CCDC171-209ENST00000498725 TBC1D3IA0A087WXS9 549 aa9.49□□□□□ -0.89
CCDC171-209ENST00000498725 TBC1D3EA0A087X179 549 aa9.49□□□□□ -0.89
CCDC171-209ENST00000498725 TBC1D3KA0A087X1G2 549 aa9.49□□□□□ -0.89
CCDC171-209ENST00000498725 A0A1W2PR77 199 aa9.49□□□□□ -0.89
CCDC171-209ENST00000498725 TBC1D3FA6NER0 549 aaPredicted RBP9.49□□□□□ -0.89
CCDC171-209ENST00000498725 CAPN8A6NHC0 703 aa9.49□□□□□ -0.89
CCDC171-209ENST00000498725 TTC34A8MYJ7 566 aa9.49□□□□□ -0.89
CCDC171-209ENST00000498725 TBC1D3LB9A6J9 549 aa9.49□□□□□ -0.89
CCDC171-209ENST00000498725 TLR4O00206 839 aa9.49□□□□□ -0.89
CCDC171-209ENST00000498725 TULP2O00295 520 aa9.49□□□□□ -0.89
CCDC171-209ENST00000498725 KLK10O43240 276 aa9.49□□□□□ -0.89
CCDC171-209ENST00000498725 MT-CO3P00414 261 aa9.49□□□□□ -0.89
CCDC171-209ENST00000498725 RPN1P04843 607 aaKnown RBP9.49□□□□□ -0.89
CCDC171-209ENST00000498725 TBC1D3HP0C7X1 549 aa9.49□□□□□ -0.89
CCDC171-209ENST00000498725 TRIM49P0CI25 452 aa9.49□□□□□ -0.89
CCDC171-209ENST00000498725 TRIM49CP0CI26 452 aa9.49□□□□□ -0.89
CCDC171-209ENST00000498725 MYF5P13349 255 aa9.49□□□□□ -0.89
CCDC171-209ENST00000498725 SLC8A1P32418 973 aa9.49□□□□□ -0.89
CCDC171-209ENST00000498725 GCLMP48507 274 aa9.49□□□□□ -0.89
CCDC171-209ENST00000498725 PCBP4P57723 403 aaKnown RBP9.49□□□□□ -0.89
CCDC171-209ENST00000498725 PPP2CBP62714 309 aa9.49□□□□□ -0.89
CCDC171-209ENST00000498725 PPP2CAP67775 309 aa9.49□□□□□ -0.89
CCDC171-209ENST00000498725 GABREP78334 506 aa9.49□□□□□ -0.89
CCDC171-209ENST00000498725 INCA1Q0VD86 236 aa9.49□□□□□ -0.89
CCDC171-209ENST00000498725 CUL4BQ13620 913 aa9.49□□□□□ -0.89
CCDC171-209ENST00000498725 TRIP4Q15650 581 aaPredicted RBP9.49□□□□□ -0.89
CCDC171-209ENST00000498725 POM121L1PQ3SYA9 428 aa9.49□□□□□ -0.89
CCDC171-209ENST00000498725 C8orf34Q49A92 452 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms