RNA–Protein interactions for RNA: ENST00000497171.1

PHC3-216, Transcript of polyhomeotic homolog 3, humanhuman

TSL 2

Gene PHC3, Length 420 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-216ENST00000497171 RTKNQ9BST9 563 aa3.76□□□□□ -1.81
PHC3-216ENST00000497171 ISCA1Q9BUE6 129 aa3.76□□□□□ -1.81
PHC3-216ENST00000497171 TAF1DQ9H5J8 278 aaPredicted RBP3.76□□□□□ -1.81
PHC3-216ENST00000497171 ELAC1Q9H777 363 aaKnown RBP3.76□□□□□ -1.81
PHC3-216ENST00000497171 MLXIPQ9HAP2 919 aa3.76□□□□□ -1.81
PHC3-216ENST00000497171 TMEM8AQ9HCN3 771 aa3.76□□□□□ -1.81
PHC3-216ENST00000497171 RRN3Q9NYV6 651 aa3.76□□□□□ -1.81
PHC3-216ENST00000497171 LPAR3Q9UBY5 353 aa3.76□□□□□ -1.81
PHC3-216ENST00000497171 HS3ST3B1Q9Y662 390 aa3.76□□□□□ -1.81
PHC3-216ENST00000497171 M0R3H8 397 aa3.75□□□□□ -1.81
PHC3-216ENST00000497171 PPP6R2O75170 966 aa3.75□□□□□ -1.81
PHC3-216ENST00000497171 KRT38O76015 456 aa3.75□□□□□ -1.81
PHC3-216ENST00000497171 NTSR2O95665 410 aa3.75□□□□□ -1.81
PHC3-216ENST00000497171 TOMM40O96008 361 aa3.75□□□□□ -1.81
PHC3-216ENST00000497171 VEGFAP15692 232 aaPredicted RBP3.75□□□□□ -1.81
PHC3-216ENST00000497171 CREB1P16220 341 aa3.75□□□□□ -1.81
PHC3-216ENST00000497171 CDC25AP30304 524 aa3.75□□□□□ -1.81
PHC3-216ENST00000497171 GKP32189 559 aa3.75□□□□□ -1.81
PHC3-216ENST00000497171 POLE2P56282 527 aa3.75□□□□□ -1.81
PHC3-216ENST00000497171 TIAL1Q01085 375 aaKnown RBP eCLIP3.75□□□□□ -1.81
PHC3-216ENST00000497171 E2F1Q01094 437 aa3.75□□□□□ -1.81
PHC3-216ENST00000497171 RNASELQ05823 741 aaKnown RBP3.75□□□□□ -1.81
PHC3-216ENST00000497171 TAF12Q16514 161 aa3.75□□□□□ -1.81
PHC3-216ENST00000497171 L1TD1Q5T7N2 865 aaKnown RBP3.75□□□□□ -1.81
PHC3-216ENST00000497171 Q6ZWC4 215 aa3.75□□□□□ -1.81
PHC3-216ENST00000497171 ANKRD18AQ8IVF6 992 aa3.75□□□□□ -1.81
PHC3-216ENST00000497171 SUGP1Q8IWZ8 645 aaKnown RBP3.75□□□□□ -1.81
PHC3-216ENST00000497171 SIRT6Q8N6T7 355 aa3.75□□□□□ -1.81
PHC3-216ENST00000497171 NGDNQ8NEJ9 315 aaKnown RBP3.75□□□□□ -1.81
PHC3-216ENST00000497171 SCAMP5Q8TAC9 235 aa3.75□□□□□ -1.81
PHC3-216ENST00000497171 SUN3Q8TAQ9 357 aa3.75□□□□□ -1.81
PHC3-216ENST00000497171 OSR1Q8TAX0 266 aaPredicted RBP3.75□□□□□ -1.81
PHC3-216ENST00000497171 AFG1LQ8WV93 481 aa3.75□□□□□ -1.81
PHC3-216ENST00000497171 GOLGA1Q92805 767 aa3.75□□□□□ -1.81
PHC3-216ENST00000497171 GCC1Q96CN9 775 aa3.75□□□□□ -1.81
PHC3-216ENST00000497171 TRAPPC9Q96Q05 1148 aa3.75□□□□□ -1.81
PHC3-216ENST00000497171 SIGLEC11Q96RL6 698 aa3.75□□□□□ -1.81
PHC3-216ENST00000497171 ZPBPQ9BS86 351 aa3.75□□□□□ -1.81
PHC3-216ENST00000497171 CIPCQ9C0C6 399 aa3.75□□□□□ -1.81
PHC3-216ENST00000497171 SEPSECSQ9HD40 501 aaKnown RBP3.75□□□□□ -1.81
PHC3-216ENST00000497171 SAYSD1Q9NPB0 183 aa3.75□□□□□ -1.81
PHC3-216ENST00000497171 KIF17Q9P2E2 1029 aa3.75□□□□□ -1.81
PHC3-216ENST00000497171 MGAT4CQ9UBM8 478 aa3.75□□□□□ -1.81
PHC3-216ENST00000497171 VPS4AQ9UN37 437 aa3.75□□□□□ -1.81
PHC3-216ENST00000497171 GTF2A1LQ9UNN4 478 aa3.75□□□□□ -1.81
PHC3-216ENST00000497171 GPR52Q9Y2T5 361 aa3.75□□□□□ -1.81
PHC3-216ENST00000497171 OR2W5A6NFC9 320 aa3.74□□□□□ -1.81
PHC3-216ENST00000497171 C4orf47A7E2U8 309 aa3.74□□□□□ -1.81
PHC3-216ENST00000497171 PRSS47A8MTI9 375 aa3.74□□□□□ -1.81
PHC3-216ENST00000497171 CA12O43570 354 aa3.74□□□□□ -1.81
PHC3-216ENST00000497171 PMPCBO75439 489 aa3.74□□□□□ -1.81
PHC3-216ENST00000497171 TAF5LO75529 589 aa3.74□□□□□ -1.81
PHC3-216ENST00000497171 TJP3O95049 919 aa3.74□□□□□ -1.81
PHC3-216ENST00000497171 HOXD9P28356 352 aaPredicted RBP3.74□□□□□ -1.81
PHC3-216ENST00000497171 HTR7P34969 479 aa3.74□□□□□ -1.81
PHC3-216ENST00000497171 PRKAA2P54646 552 aa3.74□□□□□ -1.81
PHC3-216ENST00000497171 SRSF1Q07955 248 aaKnown RBP eCLIP3.74□□□□□ -1.81
PHC3-216ENST00000497171 FOXO1Q12778 655 aa3.74□□□□□ -1.81
PHC3-216ENST00000497171 ST3GAL2Q16842 350 aa3.74□□□□□ -1.81
PHC3-216ENST00000497171 FAM187BQ17R55 369 aa3.74□□□□□ -1.81
PHC3-216ENST00000497171 ADCK5Q3MIX3 580 aa3.74□□□□□ -1.81
PHC3-216ENST00000497171 ZNF569Q5MCW4 686 aa3.74□□□□□ -1.81
PHC3-216ENST00000497171 GFI1BQ5VTD9 330 aa3.74□□□□□ -1.81
PHC3-216ENST00000497171 ANKRD40Q6AI12 368 aa3.74□□□□□ -1.81
PHC3-216ENST00000497171 KRTAP5-4Q6L8H1 288 aa3.74□□□□□ -1.81
PHC3-216ENST00000497171 SLC44A2Q8IWA5 706 aaPredicted RBP3.74□□□□□ -1.81
PHC3-216ENST00000497171 FTSJ3Q8IY81 847 aaKnown RBP3.74□□□□□ -1.81
PHC3-216ENST00000497171 STT3BQ8TCJ2 826 aa3.74□□□□□ -1.81
PHC3-216ENST00000497171 CSGALNACT1Q8TDX6 532 aa3.74□□□□□ -1.81
PHC3-216ENST00000497171 ADAMTS18Q8TE60 1221 aa3.74□□□□□ -1.81
PHC3-216ENST00000497171 HMGB4Q8WW32 186 aa3.74□□□□□ -1.81
PHC3-216ENST00000497171 NR4A3Q92570 626 aa3.74□□□□□ -1.81
PHC3-216ENST00000497171 EID2BQ96D98 161 aa3.74□□□□□ -1.81
PHC3-216ENST00000497171 PRR25Q96S07 402 aa3.74□□□□□ -1.81
PHC3-216ENST00000497171 TMEM204Q9BSN7 226 aa3.74□□□□□ -1.81
PHC3-216ENST00000497171 PABPC3Q9H361 631 aaKnown RBP3.74□□□□□ -1.81
PHC3-216ENST00000497171 TP63Q9H3D4 680 aaPredicted RBP3.74□□□□□ -1.81
PHC3-216ENST00000497171 USP29Q9HBJ7 922 aa3.74□□□□□ -1.81
PHC3-216ENST00000497171 FSCN3Q9NQT6 498 aa3.74□□□□□ -1.81
PHC3-216ENST00000497171 SRP68Q9UHB9 627 aaKnown RBP3.74□□□□□ -1.81
PHC3-216ENST00000497171 PCDHB2Q9Y5E7 798 aa3.74□□□□□ -1.81
PHC3-216ENST00000497171 KIF28PB7ZC32 967 aa3.73□□□□□ -1.81
PHC3-216ENST00000497171 BTBD19C9JJ37 291 aa3.73□□□□□ -1.81
PHC3-216ENST00000497171 EIF3FO00303 357 aaPredicted RBP3.73□□□□□ -1.81
PHC3-216ENST00000497171 RPP40O75818 363 aaKnown RBP3.73□□□□□ -1.81
PHC3-216ENST00000497171 GAS8-AS1O95177 125 aa3.73□□□□□ -1.81
PHC3-216ENST00000497171 PDE8BO95263 885 aa3.73□□□□□ -1.81
PHC3-216ENST00000497171 CER1O95813 267 aa3.73□□□□□ -1.81
PHC3-216ENST00000497171 PRKCBP05771 671 aa3.73□□□□□ -1.81
PHC3-216ENST00000497171 CYP19A1P11511 503 aaPredicted RBP3.73□□□□□ -1.81
PHC3-216ENST00000497171 ALADP13716 330 aa3.73□□□□□ -1.81
PHC3-216ENST00000497171 HSD3B1P14060 373 aa3.73□□□□□ -1.81
PHC3-216ENST00000497171 RXRAP19793 462 aa3.73□□□□□ -1.81
PHC3-216ENST00000497171 AARSP49588 968 aaKnown RBP eCLIP3.73□□□□□ -1.81
PHC3-216ENST00000497171 ARL4CP56559 192 aa3.73□□□□□ -1.81
PHC3-216ENST00000497171 SEMA3BQ13214 749 aa3.73□□□□□ -1.81
PHC3-216ENST00000497171 CUL4BQ13620 913 aa3.73□□□□□ -1.81
PHC3-216ENST00000497171 CLCA4Q14CN2 919 aa3.73□□□□□ -1.81
PHC3-216ENST00000497171 ASIC2Q16515 512 aa3.73□□□□□ -1.81
PHC3-216ENST00000497171 SYNE3Q6ZMZ3 975 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms