RNA–Protein interactions for RNA: ENST00000497044.5

SHTN1-206, Transcript of shootin 1, humanhuman

TSL 2

Gene SHTN1, Length 3,647 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHTN1-206ENST00000497044 MMP17Q9ULZ9 603 aa3.3□□□□□ -1.88
SHTN1-206ENST00000497044 SRPRBQ9Y5M8 271 aaKnown RBP3.3□□□□□ -1.88
SHTN1-206ENST00000497044 A0A087WZ62 844 aa3.29□□□□□ -1.88
SHTN1-206ENST00000497044 SPECC1L-ADORA2AF8WAN1 911 aa3.29□□□□□ -1.88
SHTN1-206ENST00000497044 SLC9A3R1O14745 358 aaPredicted RBP3.29□□□□□ -1.88
SHTN1-206ENST00000497044 CUTAO60888 179 aa3.29□□□□□ -1.88
SHTN1-206ENST00000497044 CRTAMO95727 393 aa3.29□□□□□ -1.88
SHTN1-206ENST00000497044 GLI4P10075 376 aa3.29□□□□□ -1.88
SHTN1-206ENST00000497044 HNRNPLP14866 589 aaKnown RBP eCLIP3.29□□□□□ -1.886e-8■■■□□ 17.4
SHTN1-206ENST00000497044 PROZP22891 400 aa3.29□□□□□ -1.88
SHTN1-206ENST00000497044 PTGS1P23219 599 aa3.29□□□□□ -1.88
SHTN1-206ENST00000497044 AKAP5P24588 427 aa3.29□□□□□ -1.88
SHTN1-206ENST00000497044 ETV3P41162 512 aa3.29□□□□□ -1.88
SHTN1-206ENST00000497044 ERVPABLB-1P60509 514 aa3.29□□□□□ -1.88
SHTN1-206ENST00000497044 CREB5Q02930 508 aa3.29□□□□□ -1.88
SHTN1-206ENST00000497044 MBTD1Q05BQ5 628 aa3.29□□□□□ -1.88
SHTN1-206ENST00000497044 STRN3Q13033 797 aa3.29□□□□□ -1.88
SHTN1-206ENST00000497044 CTTNQ14247 550 aaKnown RBP3.29□□□□□ -1.88
SHTN1-206ENST00000497044 ODF1Q14990 250 aa3.29□□□□□ -1.88
SHTN1-206ENST00000497044 NR0B2Q15466 257 aa3.29□□□□□ -1.88
SHTN1-206ENST00000497044 SURF1Q15526 300 aa3.29□□□□□ -1.88
SHTN1-206ENST00000497044 ZNF174Q15697 407 aa3.29□□□□□ -1.88
SHTN1-206ENST00000497044 USP39Q53GS9 565 aaKnown RBP3.29□□□□□ -1.88
SHTN1-206ENST00000497044 SPOUT1Q5T280 376 aaKnown RBP3.29□□□□□ -1.88
SHTN1-206ENST00000497044 ZNF787Q6DD87 383 aa3.29□□□□□ -1.88
SHTN1-206ENST00000497044 MCTP1Q6DN14 999 aa3.29□□□□□ -1.88
SHTN1-206ENST00000497044 CD300LGQ6UXG3 332 aa3.29□□□□□ -1.88
SHTN1-206ENST00000497044 SLC34A3Q8N130 599 aa3.29□□□□□ -1.88
SHTN1-206ENST00000497044 RNF149Q8NC42 400 aa3.29□□□□□ -1.88
SHTN1-206ENST00000497044 PRPF31Q8WWY3 499 aaKnown RBP3.29□□□□□ -1.88
SHTN1-206ENST00000497044 ERLEC1Q96DZ1 483 aa3.29□□□□□ -1.88
SHTN1-206ENST00000497044 FDXACB1Q9BRP7 624 aaPredicted RBP3.29□□□□□ -1.88
SHTN1-206ENST00000497044 NUSAP1Q9BXS6 441 aaKnown RBP3.29□□□□□ -1.88
SHTN1-206ENST00000497044 TRIM6Q9C030 488 aaPredicted RBP3.29□□□□□ -1.88
SHTN1-206ENST00000497044 CD248Q9HCU0 757 aa3.29□□□□□ -1.88
SHTN1-206ENST00000497044 GPRC5CQ9NQ84 441 aa3.29□□□□□ -1.88
SHTN1-206ENST00000497044 XPNPEP1Q9NQW7 623 aa3.29□□□□□ -1.88
SHTN1-206ENST00000497044 OXSMQ9NWU1 459 aa3.29□□□□□ -1.88
SHTN1-206ENST00000497044 NCKIPSDQ9NZQ3 722 aa3.29□□□□□ -1.88
SHTN1-206ENST00000497044 PIN4Q9Y237 131 aaKnown RBP3.29□□□□□ -1.88
SHTN1-206ENST00000497044 SF3B6Q9Y3B4 125 aaKnown RBP3.29□□□□□ -1.88
SHTN1-206ENST00000497044 ANAPC1Q9H1A4 1944 aa3.29□□□□□ -1.88
SHTN1-206ENST00000497044 CCDC189A1A4V9 331 aa3.29□□□□□ -1.88
SHTN1-206ENST00000497044 STX6O43752 255 aa3.29□□□□□ -1.88
SHTN1-206ENST00000497044 TSPAN1O60635 241 aa3.29□□□□□ -1.88
SHTN1-206ENST00000497044 TACC1O75410 805 aa3.29□□□□□ -1.88
SHTN1-206ENST00000497044 ALX3O95076 343 aa3.29□□□□□ -1.88
SHTN1-206ENST00000497044 CAVIN2O95810 425 aa3.29□□□□□ -1.88
SHTN1-206ENST00000497044 CER1O95813 267 aa3.29□□□□□ -1.88
SHTN1-206ENST00000497044 OLFM2O95897 454 aa3.29□□□□□ -1.88
SHTN1-206ENST00000497044 VTNP04004 478 aa3.29□□□□□ -1.88
SHTN1-206ENST00000497044 HSP90AA1P07900 732 aaKnown RBP3.29□□□□□ -1.88
SHTN1-206ENST00000497044 PLS3P13797 630 aa3.29□□□□□ -1.88
SHTN1-206ENST00000497044 GLRA2P23416 452 aa3.29□□□□□ -1.88
SHTN1-206ENST00000497044 CD82P27701 267 aa3.29□□□□□ -1.88
SHTN1-206ENST00000497044 CDC25AP30304 524 aa3.29□□□□□ -1.88
SHTN1-206ENST00000497044 ASPAP45381 313 aa3.29□□□□□ -1.88
SHTN1-206ENST00000497044 ZNF131P52739 623 aa3.29□□□□□ -1.88
SHTN1-206ENST00000497044 SATB1Q01826 763 aa3.29□□□□□ -1.88
SHTN1-206ENST00000497044 GRSF1Q12849 480 aaKnown RBP eCLIP3.29□□□□□ -1.88
SHTN1-206ENST00000497044 RESTQ13127 1097 aa3.29□□□□□ -1.88
SHTN1-206ENST00000497044 PRPF4BQ13523 1007 aaKnown RBP3.29□□□□□ -1.88
SHTN1-206ENST00000497044 PSMD5Q16401 504 aa3.29□□□□□ -1.88
SHTN1-206ENST00000497044 CCDC142Q17RM4 750 aa3.29□□□□□ -1.88
SHTN1-206ENST00000497044 TNFAIP8L3Q5GJ75 292 aa3.29□□□□□ -1.88
SHTN1-206ENST00000497044 PARM1Q6UWI2 310 aa3.29□□□□□ -1.88
SHTN1-206ENST00000497044 PHACTR4Q8IZ21 702 aa3.29□□□□□ -1.88
SHTN1-206ENST00000497044 AGGF1Q8N302 714 aaeCLIP3.29□□□□□ -1.886e-22■□□□□ 11.2
SHTN1-206ENST00000497044 CNTD1Q8N815 330 aa3.29□□□□□ -1.88
SHTN1-206ENST00000497044 TRAPPC12Q8WVT3 735 aa3.29□□□□□ -1.88
SHTN1-206ENST00000497044 KCTD13Q8WZ19 329 aa3.29□□□□□ -1.88
SHTN1-206ENST00000497044 CCDC47Q96A33 483 aaKnown RBP3.29□□□□□ -1.88
SHTN1-206ENST00000497044 ZNF419Q96HQ0 510 aaPredicted RBP3.29□□□□□ -1.88
SHTN1-206ENST00000497044 FUBP3Q96I24 572 aaKnown RBP eCLIP3.29□□□□□ -1.88
SHTN1-206ENST00000497044 NLRP4Q96MN2 994 aa3.29□□□□□ -1.88
SHTN1-206ENST00000497044 EDEM2Q9BV94 578 aa3.29□□□□□ -1.88
SHTN1-206ENST00000497044 SARGQ9BW04 601 aa3.29□□□□□ -1.88
SHTN1-206ENST00000497044 TMEM60Q9H2L4 133 aa3.29□□□□□ -1.88
SHTN1-206ENST00000497044 IFT22Q9H7X7 185 aa3.29□□□□□ -1.88
SHTN1-206ENST00000497044 ARHGAP28Q9P2N2 729 aa3.29□□□□□ -1.88
SHTN1-206ENST00000497044 CA14Q9ULX7 337 aa3.29□□□□□ -1.88
SHTN1-206ENST00000497044 MYH11P35749 1972 aa3.29□□□□□ -1.88
SHTN1-206ENST00000497044 FADS2P1A8MWK0 482 aa3.29□□□□□ -1.88
SHTN1-206ENST00000497044 TOR1BO14657 336 aa3.29□□□□□ -1.88
SHTN1-206ENST00000497044 ARHGAP6O43182 974 aa3.29□□□□□ -1.88
SHTN1-206ENST00000497044 USO1O60763 962 aaKnown RBP3.29□□□□□ -1.88
SHTN1-206ENST00000497044 TBCAO75347 108 aaKnown RBP3.29□□□□□ -1.88
SHTN1-206ENST00000497044 MED24O75448 989 aa3.29□□□□□ -1.88
SHTN1-206ENST00000497044 DDHD2O94830 711 aa3.29□□□□□ -1.88
SHTN1-206ENST00000497044 LDHAP00338 332 aaKnown RBP3.29□□□□□ -1.88
SHTN1-206ENST00000497044 PRKCBP05771 671 aa3.29□□□□□ -1.88
SHTN1-206ENST00000497044 C8AP07357 584 aa3.29□□□□□ -1.88
SHTN1-206ENST00000497044 H2AFB1P0C5Y9 115 aa3.29□□□□□ -1.88
SHTN1-206ENST00000497044 H2AFB2P0C5Z0 115 aa3.29□□□□□ -1.88
SHTN1-206ENST00000497044 PNLIPP16233 465 aa3.29□□□□□ -1.88
SHTN1-206ENST00000497044 TOB1P50616 345 aaPredicted RBP3.29□□□□□ -1.88
SHTN1-206ENST00000497044 AGFG1P52594 562 aaKnown RBP3.29□□□□□ -1.88
SHTN1-206ENST00000497044 NCKAP1LP55160 1127 aa3.29□□□□□ -1.88
SHTN1-206ENST00000497044 GPC5P78333 572 aa3.29□□□□□ -1.88
SHTN1-206ENST00000497044 NFKB2Q00653 900 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms