RNA–Protein interactions for RNA: ENST00000494028.1

CLCN6-208, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5

Gene CLCN6, Length 773 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-208ENST00000494028 STK10O94804 968 aaKnown RBP10.97□□□□□ -0.65
CLCN6-208ENST00000494028 VNN2O95498 520 aa10.97□□□□□ -0.65
CLCN6-208ENST00000494028 CPP00450 1065 aa10.97□□□□□ -0.65
CLCN6-208ENST00000494028 PTPN3P26045 913 aa10.97□□□□□ -0.65
CLCN6-208ENST00000494028 PSMB4P28070 264 aa10.97□□□□□ -0.65
CLCN6-208ENST00000494028 STX2P32856 288 aa10.97□□□□□ -0.65
CLCN6-208ENST00000494028 GRIK1P39086 918 aa10.97□□□□□ -0.65
CLCN6-208ENST00000494028 GEMIN4P57678 1058 aaKnown RBP10.97□□□□□ -0.65
CLCN6-208ENST00000494028 PPIDQ08752 370 aaKnown RBP10.97□□□□□ -0.65
CLCN6-208ENST00000494028 MPP2Q14168 576 aa10.97□□□□□ -0.65
CLCN6-208ENST00000494028 CTXN3Q4LDR2 81 aa10.97□□□□□ -0.65
CLCN6-208ENST00000494028 SDHAF4Q5VUM1 108 aa10.97□□□□□ -0.65
CLCN6-208ENST00000494028 BTBD8Q5XKL5 378 aa10.97□□□□□ -0.65
CLCN6-208ENST00000494028 FAM43BQ6ZT52 329 aaPredicted RBP10.97□□□□□ -0.65
CLCN6-208ENST00000494028 TMEM173Q86WV6 379 aaPredicted RBP10.97□□□□□ -0.65
CLCN6-208ENST00000494028 ZNF567Q8N184 647 aa10.97□□□□□ -0.65
CLCN6-208ENST00000494028 LRRC43Q8N309 656 aa10.97□□□□□ -0.65
CLCN6-208ENST00000494028 MPP5Q8N3R9 675 aa10.97□□□□□ -0.65
CLCN6-208ENST00000494028 ANKRD42Q8N9B4 389 aa10.97□□□□□ -0.65
CLCN6-208ENST00000494028 MGARPQ8TDB4 240 aa10.97□□□□□ -0.65
CLCN6-208ENST00000494028 DEPDC1BQ8WUY9 529 aa10.97□□□□□ -0.65
CLCN6-208ENST00000494028 LRRC39Q96DD0 335 aa10.97□□□□□ -0.65
CLCN6-208ENST00000494028 CHMP6Q96FZ7 201 aa10.97□□□□□ -0.65
CLCN6-208ENST00000494028 CFAP36Q96G28 342 aa10.97□□□□□ -0.65
CLCN6-208ENST00000494028 SCLYQ96I15 445 aa10.97□□□□□ -0.65
CLCN6-208ENST00000494028 B3GALT6Q96L58 329 aa10.97□□□□□ -0.65
CLCN6-208ENST00000494028 DEFB118Q96PH6 123 aa10.97□□□□□ -0.65
CLCN6-208ENST00000494028 TMEM175Q9BSA9 504 aa10.97□□□□□ -0.65
CLCN6-208ENST00000494028 MRPL9Q9BYD2 267 aaKnown RBP10.97□□□□□ -0.65
CLCN6-208ENST00000494028 CEP41Q9BYV8 373 aa10.97□□□□□ -0.65
CLCN6-208ENST00000494028 GPR62Q9BZJ7 368 aa10.97□□□□□ -0.65
CLCN6-208ENST00000494028 FAM107BQ9H098 131 aa10.97□□□□□ -0.65
CLCN6-208ENST00000494028 KIF9Q9HAQ2 790 aa10.97□□□□□ -0.65
CLCN6-208ENST00000494028 XAB2Q9HCS7 855 aaKnown RBP10.97□□□□□ -0.65
CLCN6-208ENST00000494028 ABCC13Q9NSE7 274 aa10.97□□□□□ -0.65
CLCN6-208ENST00000494028 SENP1Q9P0U3 644 aa10.97□□□□□ -0.65
CLCN6-208ENST00000494028 GMIPQ9P107 970 aa10.97□□□□□ -0.65
CLCN6-208ENST00000494028 IGSF9Q9P2J2 1179 aa10.97□□□□□ -0.65
CLCN6-208ENST00000494028 SCML2Q9UQR0 700 aa10.97□□□□□ -0.65
CLCN6-208ENST00000494028 PCDHB5Q9Y5E4 795 aa10.97□□□□□ -0.65
CLCN6-208ENST00000494028 MIA3Q5JRA6 1907 aa10.96□□□□□ -0.65
CLCN6-208ENST00000494028 PRPF4O43172 522 aaKnown RBP eCLIP10.96□□□□□ -0.65
CLCN6-208ENST00000494028 TADA2AO75478 443 aa10.96□□□□□ -0.65
CLCN6-208ENST00000494028 GSTA2P09210 222 aa10.96□□□□□ -0.65
CLCN6-208ENST00000494028 CCL5P13501 91 aa10.96□□□□□ -0.65
CLCN6-208ENST00000494028 ATP2A2P16615 1042 aaKnown RBP10.96□□□□□ -0.65
CLCN6-208ENST00000494028 SERPINB6P35237 376 aa10.96□□□□□ -0.65
CLCN6-208ENST00000494028 IFNAR2P48551 515 aa10.96□□□□□ -0.65
CLCN6-208ENST00000494028 MNX1P50219 401 aaPredicted RBP10.96□□□□□ -0.65
CLCN6-208ENST00000494028 USP46P62068 366 aa10.96□□□□□ -0.65
CLCN6-208ENST00000494028 AP1B1Q10567 949 aa10.96□□□□□ -0.65
CLCN6-208ENST00000494028 ZBTB17Q13105 803 aa10.96□□□□□ -0.65
CLCN6-208ENST00000494028 LRRC14Q15048 493 aa10.96□□□□□ -0.65
CLCN6-208ENST00000494028 RTP2Q5QGT7 225 aa10.96□□□□□ -0.65
CLCN6-208ENST00000494028 FAM171A1Q5VUB5 890 aa10.96□□□□□ -0.65
CLCN6-208ENST00000494028 STEAP4Q687X5 459 aa10.96□□□□□ -0.65
CLCN6-208ENST00000494028 COLGALT1Q8NBJ5 622 aa10.96□□□□□ -0.65
CLCN6-208ENST00000494028 SLC44A1Q8WWI5 657 aa10.96□□□□□ -0.65
CLCN6-208ENST00000494028 DPF3Q92784 378 aa10.96□□□□□ -0.65
CLCN6-208ENST00000494028 SIGLEC10Q96LC7 697 aa10.96□□□□□ -0.65
CLCN6-208ENST00000494028 PGLYRP2Q96PD5 576 aa10.96□□□□□ -0.65
CLCN6-208ENST00000494028 PRMT1Q99873 361 aaKnown RBP10.96□□□□□ -0.65
CLCN6-208ENST00000494028 OSBPL2Q9H1P3 480 aa10.96□□□□□ -0.65
CLCN6-208ENST00000494028 HIPK3Q9H422 1215 aa10.96□□□□□ -0.65
CLCN6-208ENST00000494028 TRABDQ9H4I3 376 aa10.96□□□□□ -0.65
CLCN6-208ENST00000494028 WDCPQ9H6R7 721 aa10.96□□□□□ -0.65
CLCN6-208ENST00000494028 OSER1Q9NX31 292 aa10.96□□□□□ -0.65
CLCN6-208ENST00000494028 RSPH14Q9UHP6 348 aa10.96□□□□□ -0.65
CLCN6-208ENST00000494028 LRFN2Q9ULH4 789 aa10.96□□□□□ -0.65
CLCN6-208ENST00000494028 PCDHB7Q9Y5E2 793 aa10.96□□□□□ -0.65
CLCN6-208ENST00000494028 FAM92AA1XBS5 289 aa10.95□□□□□ -0.66
CLCN6-208ENST00000494028 FAM47DPA6NHR8 397 aa10.95□□□□□ -0.66
CLCN6-208ENST00000494028 TBKBP1A7MCY6 615 aa10.95□□□□□ -0.66
CLCN6-208ENST00000494028 TBC1D4O60343 1298 aa10.95□□□□□ -0.66
CLCN6-208ENST00000494028 PAGE1O75459 146 aa10.95□□□□□ -0.66
CLCN6-208ENST00000494028 PIAS1O75925 651 aa10.95□□□□□ -0.66
CLCN6-208ENST00000494028 MYCP01106 439 aaPredicted RBP10.95□□□□□ -0.66
CLCN6-208ENST00000494028 MLNP12872 115 aa10.95□□□□□ -0.66
CLCN6-208ENST00000494028 KRT15P19012 456 aa10.95□□□□□ -0.66
CLCN6-208ENST00000494028 PRKCHP24723 683 aa10.95□□□□□ -0.66
CLCN6-208ENST00000494028 EPHB2P29323 1055 aa10.95□□□□□ -0.66
CLCN6-208ENST00000494028 HTR7P34969 479 aa10.95□□□□□ -0.66
CLCN6-208ENST00000494028 PBX3P40426 434 aa10.95□□□□□ -0.66
CLCN6-208ENST00000494028 GARSP41250 739 aaKnown RBP10.95□□□□□ -0.66
CLCN6-208ENST00000494028 GRIA1P42261 906 aa10.95□□□□□ -0.66
CLCN6-208ENST00000494028 CDK16Q00536 496 aa10.95□□□□□ -0.66
CLCN6-208ENST00000494028 NRG1Q02297 640 aaPredicted RBP10.95□□□□□ -0.66
CLCN6-208ENST00000494028 PPP2R5DQ14738 602 aa10.95□□□□□ -0.66
CLCN6-208ENST00000494028 DDR2Q16832 855 aa10.95□□□□□ -0.66
CLCN6-208ENST00000494028 KBTBD12Q3ZCT8 623 aa10.95□□□□□ -0.66
CLCN6-208ENST00000494028 TRIM60Q495X7 471 aa10.95□□□□□ -0.66
CLCN6-208ENST00000494028 ADGRD1Q6QNK2 874 aa10.95□□□□□ -0.66
CLCN6-208ENST00000494028 RSPO2Q6UXX9 243 aaPredicted RBP10.95□□□□□ -0.66
CLCN6-208ENST00000494028 UNC5AQ6ZN44 842 aa10.95□□□□□ -0.66
CLCN6-208ENST00000494028 C3orf62Q6ZUJ4 267 aa10.95□□□□□ -0.66
CLCN6-208ENST00000494028 PDZD4Q76G19 769 aaPredicted RBP10.95□□□□□ -0.66
CLCN6-208ENST00000494028 ANKRD33Q7Z3H0 272 aa10.95□□□□□ -0.66
CLCN6-208ENST00000494028 SRLQ86TD4 932 aa10.95□□□□□ -0.66
CLCN6-208ENST00000494028 PRPF39Q86UA1 669 aaKnown RBP10.95□□□□□ -0.66
CLCN6-208ENST00000494028 ARHGAP12Q8IWW6 846 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms