RNA–Protein interactions for RNA: ENST00000493903.1

GTF3A-208, Transcript of general transcription factor IIIA, humanhuman

TSL 3

Gene GTF3A, Length 748 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-208ENST00000493903 A0A1W2PQM1 296 aa4.8□□□□□ -1.64
GTF3A-208ENST00000493903 M0QZQ0 153 aa4.8□□□□□ -1.64
GTF3A-208ENST00000493903 BCAT2O15382 392 aaPredicted RBP4.8□□□□□ -1.64
GTF3A-208ENST00000493903 TGFB1I1O43294 461 aa4.8□□□□□ -1.64
GTF3A-208ENST00000493903 B4GALT3O60512 393 aa4.8□□□□□ -1.64
GTF3A-208ENST00000493903 HSP90AB1P08238 724 aaKnown RBP4.8□□□□□ -1.64
GTF3A-208ENST00000493903 CLTBP09497 229 aa4.8□□□□□ -1.64
GTF3A-208ENST00000493903 CYP3A7P24462 503 aa4.8□□□□□ -1.64
GTF3A-208ENST00000493903 OCA2Q04671 838 aa4.8□□□□□ -1.64
GTF3A-208ENST00000493903 CRYMQ14894 314 aa4.8□□□□□ -1.64
GTF3A-208ENST00000493903 NAA25Q14CX7 972 aa4.8□□□□□ -1.64
GTF3A-208ENST00000493903 FAM187BQ17R55 369 aa4.8□□□□□ -1.64
GTF3A-208ENST00000493903 RUNDC3AQ59EK9 446 aa4.8□□□□□ -1.64
GTF3A-208ENST00000493903 WDR93Q6P2C0 686 aa4.8□□□□□ -1.64
GTF3A-208ENST00000493903 NCEH1Q6PIU2 408 aa4.8□□□□□ -1.64
GTF3A-208ENST00000493903 HTR3DQ70Z44 454 aa4.8□□□□□ -1.64
GTF3A-208ENST00000493903 DTX2Q86UW9 622 aa4.8□□□□□ -1.64
GTF3A-208ENST00000493903 MAPKAPK5Q8IW41 473 aa4.8□□□□□ -1.64
GTF3A-208ENST00000493903 TEX11Q8IYF3 940 aa4.8□□□□□ -1.64
GTF3A-208ENST00000493903 ANKRD35Q8N283 1001 aa4.8□□□□□ -1.64
GTF3A-208ENST00000493903 GLMPQ8WWB7 406 aa4.8□□□□□ -1.64
GTF3A-208ENST00000493903 RUFY2Q8WXA3 655 aa4.8□□□□□ -1.64
GTF3A-208ENST00000493903 SOCS4Q8WXH5 440 aa4.8□□□□□ -1.64
GTF3A-208ENST00000493903 POMGNT1Q8WZA1 660 aa4.8□□□□□ -1.64
GTF3A-208ENST00000493903 JAKMIP2Q96AA8 810 aa4.8□□□□□ -1.64
GTF3A-208ENST00000493903 RNFT2Q96EX2 444 aa4.8□□□□□ -1.64
GTF3A-208ENST00000493903 TMEM176AQ96HP8 235 aa4.8□□□□□ -1.64
GTF3A-208ENST00000493903 EDEM3Q9BZQ6 932 aa4.8□□□□□ -1.64
GTF3A-208ENST00000493903 AMBRA1Q9C0C7 1298 aa4.8□□□□□ -1.64
GTF3A-208ENST00000493903 SMARCAD1Q9H4L7 1026 aa4.8□□□□□ -1.64
GTF3A-208ENST00000493903 RETREG1Q9H6L5 497 aa4.8□□□□□ -1.64
GTF3A-208ENST00000493903 SLCO3A1Q9UIG8 710 aa4.8□□□□□ -1.64
GTF3A-208ENST00000493903 SH3BP1Q9Y3L3 701 aa4.8□□□□□ -1.64
GTF3A-208ENST00000493903 KCNE2Q9Y6J6 123 aa4.8□□□□□ -1.64
GTF3A-208ENST00000493903 NESP48681 1621 aa4.79□□□□□ -1.64
GTF3A-208ENST00000493903 CCDC187A0A096LP49 1063 aa4.79□□□□□ -1.64
GTF3A-208ENST00000493903 A0A1B0GTL3 188 aa4.79□□□□□ -1.64
GTF3A-208ENST00000493903 MYO1GB0I1T2 1018 aa4.79□□□□□ -1.64
GTF3A-208ENST00000493903 GRM8O00222 908 aa4.79□□□□□ -1.64
GTF3A-208ENST00000493903 LEFTY2O00292 366 aa4.79□□□□□ -1.64
GTF3A-208ENST00000493903 SH2B2O14492 632 aaPredicted RBP4.79□□□□□ -1.64
GTF3A-208ENST00000493903 GPR42O15529 346 aa4.79□□□□□ -1.64
GTF3A-208ENST00000493903 TBCAO75347 108 aaKnown RBP4.79□□□□□ -1.64
GTF3A-208ENST00000493903 GJB3O75712 270 aa4.79□□□□□ -1.64
GTF3A-208ENST00000493903 HSPA4LO95757 839 aa4.79□□□□□ -1.64
GTF3A-208ENST00000493903 EIF2S1P05198 315 aaKnown RBP4.79□□□□□ -1.64
GTF3A-208ENST00000493903 URODP06132 367 aa4.79□□□□□ -1.64
GTF3A-208ENST00000493903 BMP7P18075 431 aa4.79□□□□□ -1.64
GTF3A-208ENST00000493903 OAS2P29728 719 aaKnown RBP4.79□□□□□ -1.64
GTF3A-208ENST00000493903 EIF2DP41214 584 aaKnown RBP4.79□□□□□ -1.64
GTF3A-208ENST00000493903 MVDP53602 400 aa4.79□□□□□ -1.64
GTF3A-208ENST00000493903 TAS2R50P59544 299 aa4.79□□□□□ -1.64
GTF3A-208ENST00000493903 UFM1P61960 85 aa4.79□□□□□ -1.64
GTF3A-208ENST00000493903 PPP2CBP62714 309 aa4.79□□□□□ -1.64
GTF3A-208ENST00000493903 PPP2CAP67775 309 aa4.79□□□□□ -1.64
GTF3A-208ENST00000493903 PRAMEP78395 509 aa4.79□□□□□ -1.64
GTF3A-208ENST00000493903 TDGQ13569 410 aa4.79□□□□□ -1.64
GTF3A-208ENST00000493903 SCARB2Q14108 478 aa4.79□□□□□ -1.64
GTF3A-208ENST00000493903 LY6KQ17RY6 165 aa4.79□□□□□ -1.64
GTF3A-208ENST00000493903 TMEM266Q2M3C6 531 aa4.79□□□□□ -1.64
GTF3A-208ENST00000493903 LRCH2Q5VUJ6 765 aa4.79□□□□□ -1.64
GTF3A-208ENST00000493903 ZKSCAN2Q63HK3 967 aa4.79□□□□□ -1.64
GTF3A-208ENST00000493903 SP5Q6BEB4 398 aaPredicted RBP4.79□□□□□ -1.64
GTF3A-208ENST00000493903 TMEM154Q6P9G4 183 aa4.79□□□□□ -1.64
GTF3A-208ENST00000493903 TMEM88Q6PEY1 159 aa4.79□□□□□ -1.64
GTF3A-208ENST00000493903 SARM1Q6SZW1 724 aa4.79□□□□□ -1.64
GTF3A-208ENST00000493903 C16orf89Q6UX73 402 aa4.79□□□□□ -1.64
GTF3A-208ENST00000493903 FAM83HQ6ZRV2 1179 aaPredicted RBP4.79□□□□□ -1.64
GTF3A-208ENST00000493903 ARHGEF18Q6ZSZ5 1173 aa4.79□□□□□ -1.64
GTF3A-208ENST00000493903 RRM2BQ7LG56 351 aa4.79□□□□□ -1.64
GTF3A-208ENST00000493903 KDELC2Q7Z4H8 507 aa4.79□□□□□ -1.64
GTF3A-208ENST00000493903 GALNT13Q8IUC8 556 aa4.79□□□□□ -1.64
GTF3A-208ENST00000493903 ADGRF2Q8IZF7 708 aa4.79□□□□□ -1.64
GTF3A-208ENST00000493903 C17orf53Q8N3J3 647 aaPredicted RBP4.79□□□□□ -1.64
GTF3A-208ENST00000493903 MB21D1Q8N884 522 aa4.79□□□□□ -1.64
GTF3A-208ENST00000493903 LINC01356Q8N9X3 169 aa4.79□□□□□ -1.64
GTF3A-208ENST00000493903 TP53I13Q8NBR0 393 aaPredicted RBP4.79□□□□□ -1.64
GTF3A-208ENST00000493903 TOR1AIP2Q8NFQ8 470 aa4.79□□□□□ -1.64
GTF3A-208ENST00000493903 ARHGEF2Q92974 986 aaKnown RBP4.79□□□□□ -1.64
GTF3A-208ENST00000493903 TRMT61AQ96FX7 289 aaKnown RBP4.79□□□□□ -1.64
GTF3A-208ENST00000493903 BOD1Q96IK1 185 aa4.79□□□□□ -1.64
GTF3A-208ENST00000493903 EYA3Q99504 573 aa4.79□□□□□ -1.64
GTF3A-208ENST00000493903 MAK16Q9BXY0 300 aaKnown RBP4.79□□□□□ -1.64
GTF3A-208ENST00000493903 CLPBQ9H078 707 aa4.79□□□□□ -1.64
GTF3A-208ENST00000493903 RABEP2Q9H5N1 569 aa4.79□□□□□ -1.64
GTF3A-208ENST00000493903 GLOD4Q9HC38 313 aa4.79□□□□□ -1.64
GTF3A-208ENST00000493903 CCDC177Q9NQR7 707 aaPredicted RBP4.79□□□□□ -1.64
GTF3A-208ENST00000493903 SLC22A11Q9NSA0 550 aa4.79□□□□□ -1.64
GTF3A-208ENST00000493903 MRGBPQ9NV56 204 aa4.79□□□□□ -1.64
GTF3A-208ENST00000493903 THAP1Q9NVV9 213 aa4.79□□□□□ -1.64
GTF3A-208ENST00000493903 CDH22Q9UJ99 828 aa4.79□□□□□ -1.64
GTF3A-208ENST00000493903 CORO1CQ9ULV4 474 aaPredicted RBP4.79□□□□□ -1.64
GTF3A-208ENST00000493903 COPG1Q9Y678 874 aaKnown RBP4.79□□□□□ -1.64
GTF3A-208ENST00000493903 ATAD2BQ9ULI0 1458 aa4.79□□□□□ -1.64
GTF3A-208ENST00000493903 HMGXB3Q12766 1538 aa4.78□□□□□ -1.64
GTF3A-208ENST00000493903 GOLGA6L6A8MZA4 724 aa4.78□□□□□ -1.64
GTF3A-208ENST00000493903 GCOM1H8Y6P7 765 aaPredicted RBP4.78□□□□□ -1.64
GTF3A-208ENST00000493903 UBE2CO00762 179 aa4.78□□□□□ -1.64
GTF3A-208ENST00000493903 ZNF213O14771 459 aa4.78□□□□□ -1.64
GTF3A-208ENST00000493903 FYB1O15117 783 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms