RNA–Protein interactions for RNA: ENST00000492851.1

COL6A1-205, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-205ENST00000492851 DQX1Q8TE96 717 aaKnown RBP12.93□□□□□ -0.34
COL6A1-205ENST00000492851 TTC17Q96AE7 1141 aa12.93□□□□□ -0.34
COL6A1-205ENST00000492851 ERLEC1Q96DZ1 483 aa12.93□□□□□ -0.34
COL6A1-205ENST00000492851 KREMEN1Q96MU8 473 aa12.93□□□□□ -0.34
COL6A1-205ENST00000492851 NOX5Q96PH1 765 aa12.93□□□□□ -0.34
COL6A1-205ENST00000492851 LHX5Q9H2C1 402 aa12.93□□□□□ -0.34
COL6A1-205ENST00000492851 SGK2Q9HBY8 427 aa12.93□□□□□ -0.34
COL6A1-205ENST00000492851 TMEM51Q9NW97 253 aa12.93□□□□□ -0.34
COL6A1-205ENST00000492851 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.93□□□□□ -0.34
COL6A1-205ENST00000492851 KIAA1522Q9P206 1035 aaPredicted RBP12.93□□□□□ -0.34
COL6A1-205ENST00000492851 TJP2Q9UDY2 1190 aa12.93□□□□□ -0.34
COL6A1-205ENST00000492851 PCDHB9Q9Y5E1 797 aa12.93□□□□□ -0.34
COL6A1-205ENST00000492851 GTPBP10A4D1E9 387 aaKnown RBP12.92□□□□□ -0.34
COL6A1-205ENST00000492851 GADD45BO75293 160 aaPredicted RBP12.92□□□□□ -0.34
COL6A1-205ENST00000492851 CER1O95813 267 aa12.92□□□□□ -0.34
COL6A1-205ENST00000492851 FYNP06241 537 aa12.92□□□□□ -0.34
COL6A1-205ENST00000492851 SRPRAP08240 638 aaKnown RBP12.92□□□□□ -0.34
COL6A1-205ENST00000492851 ZNF883P0CG24 379 aa12.92□□□□□ -0.34
COL6A1-205ENST00000492851 MAOBP27338 520 aa12.92□□□□□ -0.34
COL6A1-205ENST00000492851 OXCT1P55809 520 aa12.92□□□□□ -0.34
COL6A1-205ENST00000492851 SIM1P81133 766 aaPredicted RBP12.92□□□□□ -0.34
COL6A1-205ENST00000492851 SLC12A1Q13621 1099 aa12.92□□□□□ -0.34
COL6A1-205ENST00000492851 CDH18Q13634 790 aa12.92□□□□□ -0.34
COL6A1-205ENST00000492851 ARID5BQ14865 1188 aa12.92□□□□□ -0.34
COL6A1-205ENST00000492851 SUZ12Q15022 739 aaKnown RBP12.92□□□□□ -0.34
COL6A1-205ENST00000492851 TEAD4Q15561 434 aa12.92□□□□□ -0.34
COL6A1-205ENST00000492851 PTPRNQ16849 979 aa12.92□□□□□ -0.34
COL6A1-205ENST00000492851 ZNF423Q2M1K9 1284 aa12.92□□□□□ -0.34
COL6A1-205ENST00000492851 MS4A13Q5J8X5 152 aa12.92□□□□□ -0.34
COL6A1-205ENST00000492851 EFHC1Q5JVL4 640 aa12.92□□□□□ -0.34
COL6A1-205ENST00000492851 RFWD3Q6PCD5 774 aa12.92□□□□□ -0.34
COL6A1-205ENST00000492851 TRIM65Q6PJ69 517 aa12.92□□□□□ -0.34
COL6A1-205ENST00000492851 CLEC4CQ8WTT0 213 aa12.92□□□□□ -0.34
COL6A1-205ENST00000492851 CYB5D2Q8WUJ1 264 aa12.92□□□□□ -0.34
COL6A1-205ENST00000492851 NUP205Q92621 2012 aa12.92□□□□□ -0.34
COL6A1-205ENST00000492851 SLC39A13Q96H72 371 aa12.92□□□□□ -0.34
COL6A1-205ENST00000492851 BTN2A3PQ96KV6 586 aa12.92□□□□□ -0.34
COL6A1-205ENST00000492851 FCRL2Q96LA5 508 aaPredicted RBP12.92□□□□□ -0.34
COL6A1-205ENST00000492851 BTBD1Q9H0C5 482 aa12.92□□□□□ -0.34
COL6A1-205ENST00000492851 MIR1-1HGQ9H1L0 117 aa12.92□□□□□ -0.34
COL6A1-205ENST00000492851 OSGEPQ9NPF4 335 aa12.92□□□□□ -0.34
COL6A1-205ENST00000492851 STIM2Q9P246 746 aa12.92□□□□□ -0.34
COL6A1-205ENST00000492851 APEX2Q9UBZ4 518 aa12.92□□□□□ -0.34
COL6A1-205ENST00000492851 NAALADL1Q9UQQ1 740 aa12.92□□□□□ -0.34
COL6A1-205ENST00000492851 NEUROG3Q9Y4Z2 214 aa12.92□□□□□ -0.34
COL6A1-205ENST00000492851 GOLGA6L7A0A1B0GV03 622 aa12.91□□□□□ -0.34
COL6A1-205ENST00000492851 TARSL2A2RTX5 802 aaKnown RBP12.91□□□□□ -0.34
COL6A1-205ENST00000492851 THAP12O43422 761 aa12.91□□□□□ -0.34
COL6A1-205ENST00000492851 HLA-EP13747 358 aa12.91□□□□□ -0.34
COL6A1-205ENST00000492851 CD59P13987 128 aa12.91□□□□□ -0.34
COL6A1-205ENST00000492851 SLC6A4P31645 630 aa12.91□□□□□ -0.34
COL6A1-205ENST00000492851 CD70P32970 193 aa12.91□□□□□ -0.34
COL6A1-205ENST00000492851 NNMTP40261 264 aa12.91□□□□□ -0.34
COL6A1-205ENST00000492851 AFF3P51826 1226 aaKnown RBP12.91□□□□□ -0.34
COL6A1-205ENST00000492851 PTK2Q05397 1052 aa12.91□□□□□ -0.34
COL6A1-205ENST00000492851 GRIK2Q13002 908 aa12.91□□□□□ -0.34
COL6A1-205ENST00000492851 TPD52L1Q16890 204 aaPredicted RBP12.91□□□□□ -0.34
COL6A1-205ENST00000492851 EXOC3L4Q17RC7 722 aa12.91□□□□□ -0.34
COL6A1-205ENST00000492851 TTC39BQ5VTQ0 682 aaPredicted RBP12.91□□□□□ -0.34
COL6A1-205ENST00000492851 ZNF776Q68DI1 518 aaPredicted RBP12.91□□□□□ -0.34
COL6A1-205ENST00000492851 DENND1BQ6P3S1 775 aa12.91□□□□□ -0.34
COL6A1-205ENST00000492851 USP30Q70CQ3 517 aa12.91□□□□□ -0.34
COL6A1-205ENST00000492851 FAM114A1Q8IWE2 563 aa12.91□□□□□ -0.34
COL6A1-205ENST00000492851 CARNMT1Q8N4J0 409 aa12.91□□□□□ -0.34
COL6A1-205ENST00000492851 ATP6V0D2Q8N8Y2 350 aa12.91□□□□□ -0.34
COL6A1-205ENST00000492851 ADAM33Q9BZ11 813 aa12.91□□□□□ -0.34
COL6A1-205ENST00000492851 CD93Q9NPY3 652 aa12.91□□□□□ -0.34
COL6A1-205ENST00000492851 PRSS16Q9NQE7 514 aa12.91□□□□□ -0.34
COL6A1-205ENST00000492851 ASNSD1Q9NWL6 643 aa12.91□□□□□ -0.34
COL6A1-205ENST00000492851 TPX2Q9ULW0 747 aaKnown RBP12.91□□□□□ -0.34
COL6A1-205ENST00000492851 WASF3Q9UPY6 502 aa12.91□□□□□ -0.34
COL6A1-205ENST00000492851 E5RJQ4 531 aa12.9□□□□□ -0.34
COL6A1-205ENST00000492851 PAPSS1O43252 624 aaPredicted RBP12.9□□□□□ -0.34
COL6A1-205ENST00000492851 GJB3O75712 270 aa12.9□□□□□ -0.34
COL6A1-205ENST00000492851 LUC7L3O95232 432 aaKnown RBP12.9□□□□□ -0.34
COL6A1-205ENST00000492851 SEMA4FO95754 770 aa12.9□□□□□ -0.34
COL6A1-205ENST00000492851 TRUB2O95900 331 aaKnown RBP12.9□□□□□ -0.34
COL6A1-205ENST00000492851 ABCB4P21439 1286 aa12.9□□□□□ -0.34
COL6A1-205ENST00000492851 CCR1P32246 355 aa12.9□□□□□ -0.34
COL6A1-205ENST00000492851 USP8P40818 1118 aa12.9□□□□□ -0.34
COL6A1-205ENST00000492851 MATKP42679 507 aa12.9□□□□□ -0.34
COL6A1-205ENST00000492851 SGSHP51688 502 aa12.9□□□□□ -0.34
COL6A1-205ENST00000492851 BPIFB4P59827 614 aa12.9□□□□□ -0.34
COL6A1-205ENST00000492851 RPS14P62263 151 aaKnown RBP12.9□□□□□ -0.34
COL6A1-205ENST00000492851 CDK17Q00537 523 aa12.9□□□□□ -0.34
COL6A1-205ENST00000492851 SULT2A1Q06520 285 aa12.9□□□□□ -0.34
COL6A1-205ENST00000492851 TRIP6Q15654 476 aaKnown RBP12.9□□□□□ -0.34
COL6A1-205ENST00000492851 HNRNPA1L2Q32P51 320 aaKnown RBP12.9□□□□□ -0.34
COL6A1-205ENST00000492851 SYPL2Q5VXT5 272 aa12.9□□□□□ -0.34
COL6A1-205ENST00000492851 RNF219Q5W0B1 726 aaPredicted RBP12.9□□□□□ -0.34
COL6A1-205ENST00000492851 NADSYN1Q6IA69 706 aa12.9□□□□□ -0.34
COL6A1-205ENST00000492851 LRSAM1Q6UWE0 723 aa12.9□□□□□ -0.34
COL6A1-205ENST00000492851 UNQ6494/PRO21346Q6UXR6 183 aa12.9□□□□□ -0.34
COL6A1-205ENST00000492851 ZCCHC9Q8N567 271 aaKnown RBP12.9□□□□□ -0.34
COL6A1-205ENST00000492851 KDF1Q8NAX2 398 aaPredicted RBP12.9□□□□□ -0.34
COL6A1-205ENST00000492851 SKA1Q96BD8 255 aa12.9□□□□□ -0.34
COL6A1-205ENST00000492851 LMLNQ96KR4 655 aa12.9□□□□□ -0.34
COL6A1-205ENST00000492851 SCNM1Q9BWG6 230 aa12.9□□□□□ -0.34
COL6A1-205ENST00000492851 RSPH9Q9H1X1 276 aaPredicted RBP12.9□□□□□ -0.34
COL6A1-205ENST00000492851 FSCN3Q9NQT6 498 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms