RNA–Protein interactions for RNA: ENST00000491165.5

USF3-203, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USF3, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-203ENST00000491165 SLITRK1Q96PX8 696 aa23.52■■□□□ 1.36
USF3-203ENST00000491165 ULBP1Q9BZM6 244 aa23.52■■□□□ 1.36
USF3-203ENST00000491165 LRRC4Q9HBW1 653 aa23.52■■□□□ 1.36
USF3-203ENST00000491165 FBXW11Q9UKB1 542 aa23.52■■□□□ 1.36
USF3-203ENST00000491165 YIPF1Q9Y548 306 aa23.52■■□□□ 1.36
USF3-203ENST00000491165 EXOC1LA0A1B0GW35 172 aa23.51■■□□□ 1.35
USF3-203ENST00000491165 FAM47DPA6NHR8 397 aa23.51■■□□□ 1.35
USF3-203ENST00000491165 PI4K2BG5E9Z4 385 aa23.51■■□□□ 1.35
USF3-203ENST00000491165 CLASP2O75122 1294 aaKnown RBP23.51■■□□□ 1.35
USF3-203ENST00000491165 TJP3O95049 919 aa23.51■■□□□ 1.35
USF3-203ENST00000491165 USP17L7P0C7H9 530 aa23.51■■□□□ 1.35
USF3-203ENST00000491165 EPCAMP16422 314 aa23.51■■□□□ 1.35
USF3-203ENST00000491165 IL9RQ01113 521 aa23.51■■□□□ 1.35
USF3-203ENST00000491165 E2F5Q15329 346 aa23.51■■□□□ 1.35
USF3-203ENST00000491165 PPP1R15BQ5SWA1 713 aa23.51■■□□□ 1.35
USF3-203ENST00000491165 KAZNQ674X7 775 aa23.51■■□□□ 1.35
USF3-203ENST00000491165 DRICH1Q6PGQ1 229 aaPredicted RBP23.51■■□□□ 1.35
USF3-203ENST00000491165 MAML1Q92585 1016 aa23.51■■□□□ 1.35
USF3-203ENST00000491165 GRAMD1AQ96CP6 724 aa23.51■■□□□ 1.35
USF3-203ENST00000491165 TTC25Q96NG3 672 aa23.51■■□□□ 1.35
USF3-203ENST00000491165 SAYSD1Q9NPB0 183 aa23.51■■□□□ 1.35
USF3-203ENST00000491165 DNPEPQ9ULA0 475 aa23.51■■□□□ 1.35
USF3-203ENST00000491165 USP3Q9Y6I4 520 aa23.51■■□□□ 1.35
USF3-203ENST00000491165 KRT1P04264 644 aa23.51■■□□□ 1.35
USF3-203ENST00000491165 KRT10P13645 584 aa23.51■■□□□ 1.35
USF3-203ENST00000491165 ZNF268Q14587 947 aaPredicted RBP23.51■■□□□ 1.35
USF3-203ENST00000491165 TRNP1Q6NT89 227 aa23.51■■□□□ 1.35
USF3-203ENST00000491165 HFE2Q6ZVN8 426 aa23.51■■□□□ 1.35
USF3-203ENST00000491165 GIMAP7Q8NHV1 300 aa23.51■■□□□ 1.35
USF3-203ENST00000491165 JOSD2Q8TAC2 188 aa23.51■■□□□ 1.35
USF3-203ENST00000491165 SLC7A14Q8TBB6 771 aa23.51■■□□□ 1.35
USF3-203ENST00000491165 LRCH3Q96II8 777 aa23.51■■□□□ 1.35
USF3-203ENST00000491165 CYLDQ9NQC7 956 aa23.51■■□□□ 1.35
USF3-203ENST00000491165 KLHL14Q9P2G3 628 aa23.51■■□□□ 1.35
USF3-203ENST00000491165 ZNF148Q9UQR1 794 aa23.51■■□□□ 1.35
USF3-203ENST00000491165 INSL5Q9Y5Q6 135 aa23.51■■□□□ 1.35
USF3-203ENST00000491165 PRRG1O14668 218 aa23.5■■□□□ 1.35
USF3-203ENST00000491165 GLUD1P00367 558 aa23.5■■□□□ 1.35
USF3-203ENST00000491165 KCNJ2P63252 427 aa23.5■■□□□ 1.35
USF3-203ENST00000491165 ATP13A4Q4VNC1 1196 aa23.5■■□□□ 1.35
USF3-203ENST00000491165 CGB2Q6NT52 195 aa23.5■■□□□ 1.35
USF3-203ENST00000491165 EMC1Q8N766 993 aa23.5■■□□□ 1.35
USF3-203ENST00000491165 GPATCH11Q8N954 259 aa23.5■■□□□ 1.35
USF3-203ENST00000491165 KREMEN2Q8NCW0 462 aa23.5■■□□□ 1.35
USF3-203ENST00000491165 METTL5Q9NRN9 209 aaKnown RBP23.5■■□□□ 1.35
USF3-203ENST00000491165 HSFX1Q9UBD0 423 aa23.5■■□□□ 1.35
USF3-203ENST00000491165 STRIP2Q9ULQ0 834 aa23.5■■□□□ 1.35
USF3-203ENST00000491165 EPB41L3Q9Y2J2 1087 aaPredicted RBP23.5■■□□□ 1.35
USF3-203ENST00000491165 TMEM191CA6NGB0 347 aa23.5■■□□□ 1.35
USF3-203ENST00000491165 TAC1P20366 129 aa23.5■■□□□ 1.35
USF3-203ENST00000491165 ACADSBP45954 432 aa23.5■■□□□ 1.35
USF3-203ENST00000491165 TWF1Q12792 350 aa23.5■■□□□ 1.35
USF3-203ENST00000491165 FAM102AQ5T9C2 384 aaPredicted RBP23.5■■□□□ 1.35
USF3-203ENST00000491165 RNF43Q68DV7 783 aa23.5■■□□□ 1.35
USF3-203ENST00000491165 MFSD7Q6UXD7 560 aa23.5■■□□□ 1.35
USF3-203ENST00000491165 DENND5BQ6ZUT9 1274 aa23.5■■□□□ 1.35
USF3-203ENST00000491165 NUP93Q8N1F7 819 aa23.5■■□□□ 1.35
USF3-203ENST00000491165 FITM2Q8N6M3 262 aa23.5■■□□□ 1.35
USF3-203ENST00000491165 ALLCQ8N6M5 410 aa23.5■■□□□ 1.35
USF3-203ENST00000491165 MCEEQ96PE7 176 aa23.5■■□□□ 1.35
USF3-203ENST00000491165 PRDM12Q9H4Q4 367 aa23.5■■□□□ 1.35
USF3-203ENST00000491165 HCFC2Q9Y5Z7 792 aa23.5■■□□□ 1.35
USF3-203ENST00000491165 YJEFN3A6XGL0 299 aa23.49■■□□□ 1.35
USF3-203ENST00000491165 E7ENQ6 273 aa23.49■■□□□ 1.35
USF3-203ENST00000491165 TUFMP49411 452 aaKnown RBP23.49■■□□□ 1.35
USF3-203ENST00000491165 ARSEP51690 589 aa23.49■■□□□ 1.35
USF3-203ENST00000491165 DAOAP59103 153 aa23.49■■□□□ 1.35
USF3-203ENST00000491165 LRRC38Q5VT99 294 aa23.49■■□□□ 1.35
USF3-203ENST00000491165 PDE12Q6L8Q7 609 aaKnown RBP23.49■■□□□ 1.35
USF3-203ENST00000491165 TDRPQ86YL5 185 aa23.49■■□□□ 1.35
USF3-203ENST00000491165 SIX6OS1Q8N1H7 587 aa23.49■■□□□ 1.35
USF3-203ENST00000491165 GLIS1Q8NBF1 620 aa23.49■■□□□ 1.35
USF3-203ENST00000491165 KLHL29Q96CT2 875 aa23.49■■□□□ 1.35
USF3-203ENST00000491165 LMAN2LQ9H0V9 348 aa23.49■■□□□ 1.35
USF3-203ENST00000491165 COL6A3P12111 3177 aa23.49■■□□□ 1.35
USF3-203ENST00000491165 TCF4P15884 667 aa23.48■■□□□ 1.35
USF3-203ENST00000491165 ELF1P32519 619 aa23.48■■□□□ 1.35
USF3-203ENST00000491165 RFC1P35251 1148 aaPredicted RBP23.48■■□□□ 1.35
USF3-203ENST00000491165 MRPS5P82675 430 aaKnown RBP23.48■■□□□ 1.35
USF3-203ENST00000491165 SLC6A3Q01959 620 aa23.48■■□□□ 1.35
USF3-203ENST00000491165 OGDHQ02218 1023 aa23.48■■□□□ 1.35
USF3-203ENST00000491165 GRIN2CQ14957 1233 aa23.48■■□□□ 1.35
USF3-203ENST00000491165 DNAJC24Q6P3W2 148 aa23.48■■□□□ 1.35
USF3-203ENST00000491165 TRABD2AQ86V40 505 aa23.48■■□□□ 1.35
USF3-203ENST00000491165 TBC1D31Q96DN5 1066 aa23.48■■□□□ 1.35
USF3-203ENST00000491165 MRPL38Q96DV4 380 aaKnown RBP23.48■■□□□ 1.35
USF3-203ENST00000491165 SPATA17Q96L03 361 aa23.48■■□□□ 1.35
USF3-203ENST00000491165 RMDN2Q96LZ7 410 aa23.48■■□□□ 1.35
USF3-203ENST00000491165 PITPNM3Q9BZ71 974 aa23.48■■□□□ 1.35
USF3-203ENST00000491165 RFPL2O75678 378 aa23.48■■□□□ 1.35
USF3-203ENST00000491165 ZBED1O96006 694 aa23.48■■□□□ 1.35
USF3-203ENST00000491165 C8AP07357 584 aa23.48■■□□□ 1.35
USF3-203ENST00000491165 FOXN2P32314 431 aa23.48■■□□□ 1.35
USF3-203ENST00000491165 NRIP1P48552 1158 aa23.48■■□□□ 1.35
USF3-203ENST00000491165 GPS1Q13098 491 aa23.48■■□□□ 1.35
USF3-203ENST00000491165 PRPF38BQ5VTL8 546 aaKnown RBP23.48■■□□□ 1.35
USF3-203ENST00000491165 PM20D1Q6GTS8 502 aa23.48■■□□□ 1.35
USF3-203ENST00000491165 SPOCD1Q6ZMY3 1216 aa23.48■■□□□ 1.35
USF3-203ENST00000491165 VN1R2Q8NFZ6 395 aa23.48■■□□□ 1.35
USF3-203ENST00000491165 SLC22A17Q8WUG5 538 aa23.48■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms