RNA–Protein interactions for RNA: ENST00000490796.1

SREBF1-216, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 698 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-216ENST00000490796 PCED1AQ9H1Q7 454 aa20.49■□□□□ 0.87
SREBF1-216ENST00000490796 TMEM245Q9H330 911 aa20.49■□□□□ 0.87
SREBF1-216ENST00000490796 EIF2B4Q9UI10 523 aaKnown RBP20.49■□□□□ 0.87
SREBF1-216ENST00000490796 SH3BP5O60239 455 aa20.48■□□□□ 0.87
SREBF1-216ENST00000490796 CER1O95813 267 aa20.48■□□□□ 0.87
SREBF1-216ENST00000490796 IGLV3-27P01718 113 aa20.48■□□□□ 0.87
SREBF1-216ENST00000490796 SGSHP51688 502 aa20.48■□□□□ 0.87
SREBF1-216ENST00000490796 TTC31Q49AM3 519 aaPredicted RBP20.48■□□□□ 0.87
SREBF1-216ENST00000490796 IL27RAQ6UWB1 636 aa20.48■□□□□ 0.87
SREBF1-216ENST00000490796 SCUBE3Q8IX30 993 aa20.48■□□□□ 0.87
SREBF1-216ENST00000490796 UBE2TQ9NPD8 197 aaPredicted RBP20.48■□□□□ 0.87
SREBF1-216ENST00000490796 WASF3Q9UPY6 502 aa20.48■□□□□ 0.87
SREBF1-216ENST00000490796 NEUROG3Q9Y4Z2 214 aa20.48■□□□□ 0.87
SREBF1-216ENST00000490796 PCDH15Q96QU1 1955 aa20.48■□□□□ 0.87
SREBF1-216ENST00000490796 CKAP5Q14008 2032 aa20.48■□□□□ 0.87
SREBF1-216ENST00000490796 KNL1Q8NG31 2342 aa20.47■□□□□ 0.87
SREBF1-216ENST00000490796 TMEM8BA6NDV4 472 aa20.47■□□□□ 0.87
SREBF1-216ENST00000490796 GABBR2O75899 941 aa20.47■□□□□ 0.87
SREBF1-216ENST00000490796 MOCS2O96007 188 aaPredicted RBP20.47■□□□□ 0.87
SREBF1-216ENST00000490796 APOEP02649 317 aa20.47■□□□□ 0.87
SREBF1-216ENST00000490796 CD70P32970 193 aa20.47■□□□□ 0.87
SREBF1-216ENST00000490796 MATKP42679 507 aa20.47■□□□□ 0.87
SREBF1-216ENST00000490796 ZBTB16Q05516 673 aa20.47■□□□□ 0.87
SREBF1-216ENST00000490796 CDH18Q13634 790 aa20.47■□□□□ 0.87
SREBF1-216ENST00000490796 TRIP6Q15654 476 aaKnown RBP20.47■□□□□ 0.87
SREBF1-216ENST00000490796 ZNF423Q2M1K9 1284 aa20.47■□□□□ 0.87
SREBF1-216ENST00000490796 FAM133BQ5BKY9 247 aaKnown RBP20.47■□□□□ 0.87
SREBF1-216ENST00000490796 NAXDQ8IW45 347 aa20.47■□□□□ 0.87
SREBF1-216ENST00000490796 CARNMT1Q8N4J0 409 aa20.47■□□□□ 0.87
SREBF1-216ENST00000490796 DQX1Q8TE96 717 aaKnown RBP20.47■□□□□ 0.87
SREBF1-216ENST00000490796 GANCQ8TET4 914 aa20.47■□□□□ 0.87
SREBF1-216ENST00000490796 BTBD1Q9H0C5 482 aa20.47■□□□□ 0.87
SREBF1-216ENST00000490796 NCKAP1Q9Y2A7 1128 aa20.47■□□□□ 0.87
SREBF1-216ENST00000490796 TLR6Q9Y2C9 796 aa20.47■□□□□ 0.87
SREBF1-216ENST00000490796 THAP12O43422 761 aa20.46■□□□□ 0.87
SREBF1-216ENST00000490796 RNASEH1O60930 286 aaKnown RBP20.46■□□□□ 0.87
SREBF1-216ENST00000490796 LETM1O95202 739 aaPredicted RBP20.46■□□□□ 0.87
SREBF1-216ENST00000490796 MOCS3O95396 460 aa20.46■□□□□ 0.87
SREBF1-216ENST00000490796 BMP6P22004 513 aa20.46■□□□□ 0.87
SREBF1-216ENST00000490796 SLC6A4P31645 630 aa20.46■□□□□ 0.87
SREBF1-216ENST00000490796 SFSWAPQ12872 951 aaKnown RBP20.46■□□□□ 0.87
SREBF1-216ENST00000490796 TEAD4Q15561 434 aa20.46■□□□□ 0.87
SREBF1-216ENST00000490796 ZNF776Q68DI1 518 aaPredicted RBP20.46■□□□□ 0.87
SREBF1-216ENST00000490796 KIAA0907Q7Z7F0 614 aaPredicted RBP20.46■□□□□ 0.87
SREBF1-216ENST00000490796 FIBINQ8TAL6 211 aa20.46■□□□□ 0.87
SREBF1-216ENST00000490796 SETD7Q8WTS6 366 aaKnown RBP20.46■□□□□ 0.87
SREBF1-216ENST00000490796 KREMEN1Q96MU8 473 aa20.46■□□□□ 0.87
SREBF1-216ENST00000490796 CAMK1GQ96NX5 476 aa20.46■□□□□ 0.87
SREBF1-216ENST00000490796 GAREM1Q9H706 876 aa20.46■□□□□ 0.87
SREBF1-216ENST00000490796 PRSS16Q9NQE7 514 aa20.46■□□□□ 0.87
SREBF1-216ENST00000490796 ZMIZ1Q9ULJ6 1067 aa20.46■□□□□ 0.87
SREBF1-216ENST00000490796 NAALADL1Q9UQQ1 740 aa20.46■□□□□ 0.87
SREBF1-216ENST00000490796 CEP83Q9Y592 693 aa20.46■□□□□ 0.87
SREBF1-216ENST00000490796 FRYQ5TBA9 3013 aa20.45■□□□□ 0.86
SREBF1-216ENST00000490796 SEMA4FO95754 770 aa20.45■□□□□ 0.86
SREBF1-216ENST00000490796 ASLP04424 464 aa20.45■□□□□ 0.86
SREBF1-216ENST00000490796 GNA15P30679 374 aa20.45■□□□□ 0.86
SREBF1-216ENST00000490796 ACSL1P33121 698 aa20.45■□□□□ 0.86
SREBF1-216ENST00000490796 USP8P40818 1118 aa20.45■□□□□ 0.86
SREBF1-216ENST00000490796 GPD2P43304 727 aa20.45■□□□□ 0.86
SREBF1-216ENST00000490796 AFF3P51826 1226 aaKnown RBP20.45■□□□□ 0.86
SREBF1-216ENST00000490796 MARSP56192 900 aaKnown RBP20.45■□□□□ 0.86
SREBF1-216ENST00000490796 RPS14P62263 151 aaKnown RBP20.45■□□□□ 0.86
SREBF1-216ENST00000490796 FAM193AP78312 1265 aa20.45■□□□□ 0.86
SREBF1-216ENST00000490796 NNTQ13423 1086 aa20.45■□□□□ 0.86
SREBF1-216ENST00000490796 PTPRNQ16849 979 aa20.45■□□□□ 0.86
SREBF1-216ENST00000490796 DENND1BQ6P3S1 775 aa20.45■□□□□ 0.86
SREBF1-216ENST00000490796 ENOSF1Q7L5Y1 443 aa20.45■□□□□ 0.86
SREBF1-216ENST00000490796 ADAM32Q8TC27 787 aa20.45■□□□□ 0.86
SREBF1-216ENST00000490796 WFDC5Q8TCV5 224 aa20.45■□□□□ 0.86
SREBF1-216ENST00000490796 FCRL2Q96LA5 508 aaPredicted RBP20.45■□□□□ 0.86
SREBF1-216ENST00000490796 FAM81BQ96LP2 452 aa20.45■□□□□ 0.86
SREBF1-216ENST00000490796 MED15Q96RN5 788 aa20.45■□□□□ 0.86
SREBF1-216ENST00000490796 C6orf106Q9H6K1 298 aaPredicted RBP20.45■□□□□ 0.86
SREBF1-216ENST00000490796 TJP2Q9UDY2 1190 aa20.45■□□□□ 0.86
SREBF1-216ENST00000490796 SLC12A6Q9UHW9 1150 aa20.45■□□□□ 0.86
SREBF1-216ENST00000490796 MSRB2Q9Y3D2 182 aa20.45■□□□□ 0.86
SREBF1-216ENST00000490796 CHD6Q8TD26 2715 aa20.45■□□□□ 0.86
SREBF1-216ENST00000490796 GADD45BO75293 160 aaPredicted RBP20.44■□□□□ 0.86
SREBF1-216ENST00000490796 GJB3O75712 270 aa20.44■□□□□ 0.86
SREBF1-216ENST00000490796 CSKP41240 450 aa20.44■□□□□ 0.86
SREBF1-216ENST00000490796 RPS24P62847 133 aaKnown RBP20.44■□□□□ 0.86
SREBF1-216ENST00000490796 RNF219Q5W0B1 726 aaPredicted RBP20.44■□□□□ 0.86
SREBF1-216ENST00000490796 NADSYN1Q6IA69 706 aa20.44■□□□□ 0.86
SREBF1-216ENST00000490796 CHCHD4Q8N4Q1 142 aa20.44■□□□□ 0.86
SREBF1-216ENST00000490796 KDF1Q8NAX2 398 aaPredicted RBP20.44■□□□□ 0.86
SREBF1-216ENST00000490796 STK32AQ8WU08 396 aa20.44■□□□□ 0.86
SREBF1-216ENST00000490796 NUCKS1Q9H1E3 243 aaKnown RBP20.44■□□□□ 0.86
SREBF1-216ENST00000490796 SGK2Q9HBY8 427 aa20.44■□□□□ 0.86
SREBF1-216ENST00000490796 KLK13Q9UKR3 277 aa20.44■□□□□ 0.86
SREBF1-216ENST00000490796 A0A1B0GVT2 93 aa20.43■□□□□ 0.86
SREBF1-216ENST00000490796 FSBPO95073 299 aa20.43■□□□□ 0.86
SREBF1-216ENST00000490796 FYNP06241 537 aa20.43■□□□□ 0.86
SREBF1-216ENST00000490796 NUMA1Q14980 2115 aa20.43■□□□□ 0.86
SREBF1-216ENST00000490796 MEA1Q16626 185 aa20.43■□□□□ 0.86
SREBF1-216ENST00000490796 HLA-BQ31612 363 aa20.43■□□□□ 0.86
SREBF1-216ENST00000490796 MS4A13Q5J8X5 152 aa20.43■□□□□ 0.86
SREBF1-216ENST00000490796 BEND5Q7L4P6 421 aa20.43■□□□□ 0.86
SREBF1-216ENST00000490796 TAC4Q86UU9 113 aa20.43■□□□□ 0.86
SREBF1-216ENST00000490796 CHSY1Q86X52 802 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms