RNA–Protein interactions for RNA: ENST00000490475.1

TTC28-207, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 5

Gene TTC28, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-207ENST00000490475 EPHX1P07099 455 aa10.78□□□□□ -0.68
TTC28-207ENST00000490475 ZNF883P0CG24 379 aa10.78□□□□□ -0.68
TTC28-207ENST00000490475 C7P10643 843 aa10.78□□□□□ -0.68
TTC28-207ENST00000490475 NCAM1P13591 858 aa10.78□□□□□ -0.68
TTC28-207ENST00000490475 ATP1A3P13637 1013 aa10.78□□□□□ -0.68
TTC28-207ENST00000490475 KRT5P13647 590 aa10.78□□□□□ -0.68
TTC28-207ENST00000490475 ZNF18P17022 549 aa10.78□□□□□ -0.68
TTC28-207ENST00000490475 USP8P40818 1118 aa10.78□□□□□ -0.68
TTC28-207ENST00000490475 IL12RB1P42701 662 aa10.78□□□□□ -0.68
TTC28-207ENST00000490475 ACADSBP45954 432 aa10.78□□□□□ -0.68
TTC28-207ENST00000490475 ZNF165P49910 485 aa10.78□□□□□ -0.68
TTC28-207ENST00000490475 NNTQ13423 1086 aa10.78□□□□□ -0.68
TTC28-207ENST00000490475 MEA1Q16626 185 aa10.78□□□□□ -0.68
TTC28-207ENST00000490475 ZSCAN23Q3MJ62 389 aa10.78□□□□□ -0.68
TTC28-207ENST00000490475 SLC41A1Q8IVJ1 513 aa10.78□□□□□ -0.68
TTC28-207ENST00000490475 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.78□□□□□ -0.68
TTC28-207ENST00000490475 OR2T3Q8NH03 318 aa10.78□□□□□ -0.68
TTC28-207ENST00000490475 TOE1Q96GM8 510 aaKnown RBP10.78□□□□□ -0.68
TTC28-207ENST00000490475 BPIFA3Q9BQP9 254 aa10.78□□□□□ -0.68
TTC28-207ENST00000490475 ACP6Q9NPH0 428 aa10.78□□□□□ -0.68
TTC28-207ENST00000490475 APEX2Q9UBZ4 518 aa10.78□□□□□ -0.68
TTC28-207ENST00000490475 SUN2Q9UH99 717 aa10.78□□□□□ -0.68
TTC28-207ENST00000490475 LIMA1Q9UHB6 759 aaKnown RBP10.78□□□□□ -0.68
TTC28-207ENST00000490475 DNAJC12Q9UKB3 198 aa10.78□□□□□ -0.68
TTC28-207ENST00000490475 SCML1Q9UN30 329 aa10.78□□□□□ -0.68
TTC28-207ENST00000490475 CNTN6Q9UQ52 1028 aa10.78□□□□□ -0.68
TTC28-207ENST00000490475 PCDHB9Q9Y5E1 797 aa10.78□□□□□ -0.68
TTC28-207ENST00000490475 RAD54BQ9Y620 910 aa10.78□□□□□ -0.68
TTC28-207ENST00000490475 FAM208BQ5VWN6 2430 aa10.78□□□□□ -0.68
TTC28-207ENST00000490475 PCDH15Q96QU1 1955 aa10.77□□□□□ -0.68
TTC28-207ENST00000490475 SMTNL1A8MU46 457 aa10.77□□□□□ -0.69
TTC28-207ENST00000490475 METTL12A8MUP2 240 aa10.77□□□□□ -0.69
TTC28-207ENST00000490475 BECN2A8MW95 431 aa10.77□□□□□ -0.69
TTC28-207ENST00000490475 WASH3PC4AMC7 463 aa10.77□□□□□ -0.69
TTC28-207ENST00000490475 FOXN3O00409 490 aaPredicted RBP10.77□□□□□ -0.69
TTC28-207ENST00000490475 MED7O43513 233 aa10.77□□□□□ -0.69
TTC28-207ENST00000490475 LTFP02788 710 aa10.77□□□□□ -0.69
TTC28-207ENST00000490475 DLDP09622 509 aaKnown RBP10.77□□□□□ -0.69
TTC28-207ENST00000490475 BRD2P25440 801 aaKnown RBP10.77□□□□□ -0.69
TTC28-207ENST00000490475 HOXD9P28356 352 aaPredicted RBP10.77□□□□□ -0.69
TTC28-207ENST00000490475 KLK7P49862 253 aa10.77□□□□□ -0.69
TTC28-207ENST00000490475 TPMTP51580 245 aa10.77□□□□□ -0.69
TTC28-207ENST00000490475 COPB1P53618 953 aaKnown RBP10.77□□□□□ -0.69
TTC28-207ENST00000490475 DAOAP59103 153 aa10.77□□□□□ -0.69
TTC28-207ENST00000490475 SIM1P81133 766 aaPredicted RBP10.77□□□□□ -0.69
TTC28-207ENST00000490475 MTA1Q13330 715 aa10.77□□□□□ -0.69
TTC28-207ENST00000490475 CAMK2GQ13555 558 aaPredicted RBP10.77□□□□□ -0.69
TTC28-207ENST00000490475 IQCB1Q15051 598 aa10.77□□□□□ -0.69
TTC28-207ENST00000490475 TTC31Q49AM3 519 aaPredicted RBP10.77□□□□□ -0.69
TTC28-207ENST00000490475 PKDCCQ504Y2 493 aa10.77□□□□□ -0.69
TTC28-207ENST00000490475 FNDC3BQ53EP0 1204 aaKnown RBP10.77□□□□□ -0.69
TTC28-207ENST00000490475 KLHDC7AQ5VTJ3 777 aa10.77□□□□□ -0.69
TTC28-207ENST00000490475 BEND5Q7L4P6 421 aa10.77□□□□□ -0.69
TTC28-207ENST00000490475 APTXQ7Z2E3 356 aaKnown RBP10.77□□□□□ -0.69
TTC28-207ENST00000490475 KDF1Q8NAX2 398 aaPredicted RBP10.77□□□□□ -0.69
TTC28-207ENST00000490475 KDM1BQ8NB78 822 aa10.77□□□□□ -0.69
TTC28-207ENST00000490475 SLC35F5Q8WV83 523 aa10.77□□□□□ -0.69
TTC28-207ENST00000490475 SERPINB11Q96P15 392 aa10.77□□□□□ -0.69
TTC28-207ENST00000490475 SCNM1Q9BWG6 230 aa10.77□□□□□ -0.69
TTC28-207ENST00000490475 GPR174Q9BXC1 333 aa10.77□□□□□ -0.69
TTC28-207ENST00000490475 MKRN2Q9H000 416 aaKnown RBP10.77□□□□□ -0.69
TTC28-207ENST00000490475 TPX2Q9ULW0 747 aaKnown RBP10.77□□□□□ -0.69
TTC28-207ENST00000490475 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.77□□□□□ -0.69
TTC28-207ENST00000490475 MSRB2Q9Y3D2 182 aa10.77□□□□□ -0.69
TTC28-207ENST00000490475 ADAMTS9Q9P2N4 1935 aa10.77□□□□□ -0.69
TTC28-207ENST00000490475 YJEFN3A6XGL0 299 aa10.76□□□□□ -0.69
TTC28-207ENST00000490475 E7ENQ6 273 aa10.76□□□□□ -0.69
TTC28-207ENST00000490475 M0QYV0 167 aa10.76□□□□□ -0.69
TTC28-207ENST00000490475 BCAT2O15382 392 aaPredicted RBP10.76□□□□□ -0.69
TTC28-207ENST00000490475 RNASEH1O60930 286 aaKnown RBP10.76□□□□□ -0.69
TTC28-207ENST00000490475 KRT37O76014 449 aa10.76□□□□□ -0.69
TTC28-207ENST00000490475 MOCS3O95396 460 aa10.76□□□□□ -0.69
TTC28-207ENST00000490475 DNTTP04053 509 aa10.76□□□□□ -0.69
TTC28-207ENST00000490475 ASLP04424 464 aa10.76□□□□□ -0.69
TTC28-207ENST00000490475 PNMA6AP0CW24 399 aaPredicted RBP10.76□□□□□ -0.69
TTC28-207ENST00000490475 PABPC1P11940 636 aaKnown RBP10.76□□□□□ -0.69
TTC28-207ENST00000490475 LCP1P13796 627 aa10.76□□□□□ -0.69
TTC28-207ENST00000490475 POLR2EP19388 210 aaKnown RBP10.76□□□□□ -0.69
TTC28-207ENST00000490475 CLCN1P35523 988 aa10.76□□□□□ -0.69
TTC28-207ENST00000490475 ST8SIA6P61647 398 aa10.76□□□□□ -0.69
TTC28-207ENST00000490475 SUZ12Q15022 739 aaKnown RBP10.76□□□□□ -0.69
TTC28-207ENST00000490475 TEAD4Q15561 434 aa10.76□□□□□ -0.69
TTC28-207ENST00000490475 CHST9Q7L1S5 443 aa10.76□□□□□ -0.69
TTC28-207ENST00000490475 ENOSF1Q7L5Y1 443 aa10.76□□□□□ -0.69
TTC28-207ENST00000490475 BHLHA9Q7RTU4 235 aa10.76□□□□□ -0.69
TTC28-207ENST00000490475 KIAA0907Q7Z7F0 614 aaPredicted RBP10.76□□□□□ -0.69
TTC28-207ENST00000490475 DEFB119Q8N690 84 aa10.76□□□□□ -0.69
TTC28-207ENST00000490475 HJURPQ8NCD3 748 aaPredicted RBP10.76□□□□□ -0.69
TTC28-207ENST00000490475 STK32AQ8WU08 396 aa10.76□□□□□ -0.69
TTC28-207ENST00000490475 NDRG1Q92597 394 aaKnown RBP10.76□□□□□ -0.69
TTC28-207ENST00000490475 EDEM1Q92611 657 aa10.76□□□□□ -0.69
TTC28-207ENST00000490475 PPP1R9BQ96SB3 815 aa10.76□□□□□ -0.69
TTC28-207ENST00000490475 LHX5Q9H2C1 402 aa10.76□□□□□ -0.69
TTC28-207ENST00000490475 CBX8Q9HC52 389 aa10.76□□□□□ -0.69
TTC28-207ENST00000490475 OSGEPQ9NPF4 335 aa10.76□□□□□ -0.69
TTC28-207ENST00000490475 SFMBT1Q9UHJ3 866 aa10.76□□□□□ -0.69
TTC28-207ENST00000490475 GGA2Q9UJY4 613 aa10.76□□□□□ -0.69
TTC28-207ENST00000490475 WASF3Q9UPY6 502 aa10.76□□□□□ -0.69
TTC28-207ENST00000490475 APOBEC2Q9Y235 224 aaKnown RBP10.76□□□□□ -0.69
TTC28-207ENST00000490475 TLR6Q9Y2C9 796 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms