RNA–Protein interactions for RNA: ENST00000489406.1

UFD1-209, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 2

Gene UFD1, Length 994 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-209ENST00000489406 CHST9Q7L1S5 443 aa15.75■□□□□ 0.11
UFD1-209ENST00000489406 IQCHQ86VS3 1027 aa15.75■□□□□ 0.11
UFD1-209ENST00000489406 OR14C36Q8NHC7 312 aa15.75■□□□□ 0.11
UFD1-209ENST00000489406 FIZ1Q96SL8 496 aa15.75■□□□□ 0.11
UFD1-209ENST00000489406 MED10Q9BTT4 135 aa15.75■□□□□ 0.11
UFD1-209ENST00000489406 PDE11AQ9HCR9 933 aa15.75■□□□□ 0.11
UFD1-209ENST00000489406 DMAP1Q9NPF5 467 aaPredicted RBP15.75■□□□□ 0.11
UFD1-209ENST00000489406 EVA1BQ9NVM1 165 aa15.75■□□□□ 0.11
UFD1-209ENST00000489406 ZNF510Q9Y2H8 683 aa15.75■□□□□ 0.11
UFD1-209ENST00000489406 MTSS1O43312 755 aa15.74■□□□□ 0.11
UFD1-209ENST00000489406 LIPCP11150 499 aa15.74■□□□□ 0.11
UFD1-209ENST00000489406 DCTP40126 519 aa15.74■□□□□ 0.11
UFD1-209ENST00000489406 HARS2P49590 506 aaKnown RBP15.74■□□□□ 0.11
UFD1-209ENST00000489406 STAT4Q14765 748 aa15.74■□□□□ 0.11
UFD1-209ENST00000489406 POSTNQ15063 836 aa15.74■□□□□ 0.11
UFD1-209ENST00000489406 CST6Q15828 149 aa15.74■□□□□ 0.11
UFD1-209ENST00000489406 CDKN3Q16667 212 aa15.74■□□□□ 0.11
UFD1-209ENST00000489406 C10orf120Q5SQS8 335 aa15.74■□□□□ 0.11
UFD1-209ENST00000489406 EFL1Q7Z2Z2 1120 aaKnown RBP15.74■□□□□ 0.11
UFD1-209ENST00000489406 FAM35AQ86V20 835 aa15.74■□□□□ 0.11
UFD1-209ENST00000489406 B3GALNT2Q8NCR0 500 aa15.74■□□□□ 0.11
UFD1-209ENST00000489406 SSC4DQ8WTU2 575 aa15.74■□□□□ 0.11
UFD1-209ENST00000489406 NMUR1Q9HB89 426 aa15.74■□□□□ 0.11
UFD1-209ENST00000489406 USP29Q9HBJ7 922 aa15.74■□□□□ 0.11
UFD1-209ENST00000489406 ZNF71Q9NQZ8 489 aaPredicted RBP15.74■□□□□ 0.11
UFD1-209ENST00000489406 NLGN3Q9NZ94 848 aa15.74■□□□□ 0.11
UFD1-209ENST00000489406 FZD4Q9ULV1 537 aa15.74■□□□□ 0.11
UFD1-209ENST00000489406 PCDHGA7Q9Y5G6 932 aa15.74■□□□□ 0.11
UFD1-209ENST00000489406 TBC1D3DA0A087WVF3 549 aa15.73■□□□□ 0.11
UFD1-209ENST00000489406 TBC1D3IA0A087WXS9 549 aa15.73■□□□□ 0.11
UFD1-209ENST00000489406 TBC1D3EA0A087X179 549 aa15.73■□□□□ 0.11
UFD1-209ENST00000489406 TBC1D3KA0A087X1G2 549 aa15.73■□□□□ 0.11
UFD1-209ENST00000489406 GOLGA8IPA6NC78 632 aa15.73■□□□□ 0.11
UFD1-209ENST00000489406 TBC1D3FA6NER0 549 aaPredicted RBP15.73■□□□□ 0.11
UFD1-209ENST00000489406 GOLGA8JA6NMD2 632 aa15.73■□□□□ 0.11
UFD1-209ENST00000489406 A8MXQ7 604 aa15.73■□□□□ 0.11
UFD1-209ENST00000489406 TBC1D3LB9A6J9 549 aa15.73■□□□□ 0.11
UFD1-209ENST00000489406 CASC3O15234 703 aaKnown RBP15.73■□□□□ 0.11
UFD1-209ENST00000489406 LATO43561 262 aa15.73■□□□□ 0.11
UFD1-209ENST00000489406 RNASEH1O60930 286 aaKnown RBP15.73■□□□□ 0.11
UFD1-209ENST00000489406 HMBSP08397 361 aa15.73■□□□□ 0.11
UFD1-209ENST00000489406 TBC1D3HP0C7X1 549 aa15.73■□□□□ 0.11
UFD1-209ENST00000489406 RARGP13631 454 aa15.73■□□□□ 0.11
UFD1-209ENST00000489406 HLA-FP30511 346 aa15.73■□□□□ 0.11
UFD1-209ENST00000489406 MAT2AP31153 395 aaKnown RBP15.73■□□□□ 0.11
UFD1-209ENST00000489406 CD97P48960 835 aa15.73■□□□□ 0.11
UFD1-209ENST00000489406 ZNF131P52739 623 aa15.73■□□□□ 0.11
UFD1-209ENST00000489406 POLE2P56282 527 aa15.73■□□□□ 0.11
UFD1-209ENST00000489406 OVGP1Q12889 678 aa15.73■□□□□ 0.11
UFD1-209ENST00000489406 DHX8Q14562 1220 aaKnown RBP15.73■□□□□ 0.11
UFD1-209ENST00000489406 KRTAP21-3Q3LHN1 58 aa15.73■□□□□ 0.11
UFD1-209ENST00000489406 POM121L1PQ3SYA9 428 aa15.73■□□□□ 0.11
UFD1-209ENST00000489406 FHL5Q5TD97 284 aa15.73■□□□□ 0.11
UFD1-209ENST00000489406 TBC1D3GQ6DHY5 549 aa15.73■□□□□ 0.11
UFD1-209ENST00000489406 TBC1D3CQ6IPX1 549 aa15.73■□□□□ 0.11
UFD1-209ENST00000489406 BORAQ6PGQ7 559 aa15.73■□□□□ 0.11
UFD1-209ENST00000489406 PAQR9Q6ZVX9 377 aa15.73■□□□□ 0.11
UFD1-209ENST00000489406 PRPF39Q86UA1 669 aaKnown RBP15.73■□□□□ 0.11
UFD1-209ENST00000489406 ADIPOR2Q86V24 386 aa15.73■□□□□ 0.11
UFD1-209ENST00000489406 MMAAQ8IVH4 418 aaKnown RBP15.73■□□□□ 0.11
UFD1-209ENST00000489406 ZC3H3Q8IXZ2 948 aaKnown RBP15.73■□□□□ 0.11
UFD1-209ENST00000489406 TBC1D3Q8IZP1 549 aaPredicted RBP15.73■□□□□ 0.11
UFD1-209ENST00000489406 NECAB1Q8N987 351 aa15.73■□□□□ 0.11
UFD1-209ENST00000489406 NOC3LQ8WTT2 800 aaKnown RBP15.73■□□□□ 0.11
UFD1-209ENST00000489406 ANKRD36BP1Q96IX9 119 aa15.73■□□□□ 0.11
UFD1-209ENST00000489406 KDM4CQ9H3R0 1056 aa15.73■□□□□ 0.11
UFD1-209ENST00000489406 SEPT10Q9P0V9 454 aa15.73■□□□□ 0.11
UFD1-209ENST00000489406 ARHGAP20Q9P2F6 1191 aa15.73■□□□□ 0.11
UFD1-209ENST00000489406 SEL1LQ9UBV2 794 aa15.73■□□□□ 0.11
UFD1-209ENST00000489406 CA5BQ9Y2D0 317 aa15.73■□□□□ 0.11
UFD1-209ENST00000489406 F8P00451 2351 aa15.73■□□□□ 0.11
UFD1-209ENST00000489406 NF1P21359 2839 aa15.73■□□□□ 0.11
UFD1-209ENST00000489406 TDRD6O60522 2096 aaKnown RBP15.72■□□□□ 0.11
UFD1-209ENST00000489406 ATP8B3O60423 1300 aa15.72■□□□□ 0.11
UFD1-209ENST00000489406 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.72■□□□□ 0.11
UFD1-209ENST00000489406 SIN3BO75182 1162 aa15.72■□□□□ 0.11
UFD1-209ENST00000489406 TACC1O75410 805 aa15.72■□□□□ 0.11
UFD1-209ENST00000489406 PIAS2O75928 621 aa15.72■□□□□ 0.11
UFD1-209ENST00000489406 NEBLO76041 1014 aa15.72■□□□□ 0.11
UFD1-209ENST00000489406 RNF224P0DH78 156 aa15.72■□□□□ 0.11
UFD1-209ENST00000489406 CORO1AP31146 461 aaKnown RBP15.72■□□□□ 0.11
UFD1-209ENST00000489406 SLC8A1P32418 973 aa15.72■□□□□ 0.11
UFD1-209ENST00000489406 ABCD1P33897 745 aa15.72■□□□□ 0.11
UFD1-209ENST00000489406 UQCRFS1P47985 274 aa15.72■□□□□ 0.11
UFD1-209ENST00000489406 ADPRHP54922 357 aa15.72■□□□□ 0.11
UFD1-209ENST00000489406 OXCT1P55809 520 aa15.72■□□□□ 0.11
UFD1-209ENST00000489406 ZNF177Q13360 481 aaPredicted RBP15.72■□□□□ 0.11
UFD1-209ENST00000489406 GUSBP11Q6P575 273 aa15.72■□□□□ 0.11
UFD1-209ENST00000489406 SND1Q7KZF4 910 aaKnown RBP eCLIP15.72■□□□□ 0.11
UFD1-209ENST00000489406 GPBP1Q86WP2 473 aa15.72■□□□□ 0.11
UFD1-209ENST00000489406 DENND1CQ8IV53 801 aa15.72■□□□□ 0.11
UFD1-209ENST00000489406 OR5B17Q8NGF7 314 aa15.72■□□□□ 0.11
UFD1-209ENST00000489406 WFIKKN2Q8TEU8 576 aa15.72■□□□□ 0.11
UFD1-209ENST00000489406 KLHDC7BQ96G42 594 aa15.72■□□□□ 0.11
UFD1-209ENST00000489406 FBXO44Q9H4M3 255 aa15.72■□□□□ 0.11
UFD1-209ENST00000489406 ABCB8Q9NUT2 735 aa15.72■□□□□ 0.11
UFD1-209ENST00000489406 KLHL11Q9NVR0 708 aa15.72■□□□□ 0.11
UFD1-209ENST00000489406 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.72■□□□□ 0.11
UFD1-209ENST00000489406 AGO1Q9UL18 857 aaKnown RBP15.72■□□□□ 0.11
UFD1-209ENST00000489406 TPX2Q9ULW0 747 aaKnown RBP15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms