RNA–Protein interactions for RNA: ENST00000487401.1

SREBF1-215, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-215ENST00000487401 RDXP35241 583 aaKnown RBP12.91□□□□□ -0.34
SREBF1-215ENST00000487401 RPS24P62847 133 aaKnown RBP12.91□□□□□ -0.34
SREBF1-215ENST00000487401 YWHAZP63104 245 aaKnown RBP12.91□□□□□ -0.34
SREBF1-215ENST00000487401 SIM1P81133 766 aaPredicted RBP12.91□□□□□ -0.34
SREBF1-215ENST00000487401 ZBTB16Q05516 673 aa12.91□□□□□ -0.34
SREBF1-215ENST00000487401 CDH18Q13634 790 aa12.91□□□□□ -0.34
SREBF1-215ENST00000487401 PTPRNQ16849 979 aa12.91□□□□□ -0.34
SREBF1-215ENST00000487401 DCAF6Q58WW2 860 aa12.91□□□□□ -0.34
SREBF1-215ENST00000487401 MS4A13Q5J8X5 152 aa12.91□□□□□ -0.34
SREBF1-215ENST00000487401 SYPL2Q5VXT5 272 aa12.91□□□□□ -0.34
SREBF1-215ENST00000487401 NADSYN1Q6IA69 706 aa12.91□□□□□ -0.34
SREBF1-215ENST00000487401 TRIM65Q6PJ69 517 aa12.91□□□□□ -0.34
SREBF1-215ENST00000487401 PIP4P1Q86T03 277 aa12.91□□□□□ -0.34
SREBF1-215ENST00000487401 TAC4Q86UU9 113 aa12.91□□□□□ -0.34
SREBF1-215ENST00000487401 OR2I1PQ8NGU4 316 aa12.91□□□□□ -0.34
SREBF1-215ENST00000487401 SLC39A13Q96H72 371 aa12.91□□□□□ -0.34
SREBF1-215ENST00000487401 THAP9Q9H5L6 903 aa12.91□□□□□ -0.34
SREBF1-215ENST00000487401 POPDC2Q9HBU9 364 aa12.91□□□□□ -0.34
SREBF1-215ENST00000487401 ACP6Q9NPH0 428 aa12.91□□□□□ -0.34
SREBF1-215ENST00000487401 PRSS16Q9NQE7 514 aa12.91□□□□□ -0.34
SREBF1-215ENST00000487401 DNAAF2Q9NVR5 837 aaKnown RBP12.91□□□□□ -0.34
SREBF1-215ENST00000487401 CHMP5Q9NZZ3 219 aa12.91□□□□□ -0.34
SREBF1-215ENST00000487401 APEX2Q9UBZ4 518 aa12.91□□□□□ -0.34
SREBF1-215ENST00000487401 TJP2Q9UDY2 1190 aa12.91□□□□□ -0.34
SREBF1-215ENST00000487401 ATG2BQ96BY7 2078 aa12.91□□□□□ -0.34
SREBF1-215ENST00000487401 SPAARA0A1B0GVQ0 90 aa12.9□□□□□ -0.34
SREBF1-215ENST00000487401 H0Y626 953 aa12.9□□□□□ -0.34
SREBF1-215ENST00000487401 BCAT2O15382 392 aaPredicted RBP12.9□□□□□ -0.34
SREBF1-215ENST00000487401 RNASEH1O60930 286 aaKnown RBP12.9□□□□□ -0.34
SREBF1-215ENST00000487401 MOCS3O95396 460 aa12.9□□□□□ -0.34
SREBF1-215ENST00000487401 ASLP04424 464 aa12.9□□□□□ -0.34
SREBF1-215ENST00000487401 CSKP41240 450 aa12.9□□□□□ -0.34
SREBF1-215ENST00000487401 SNX16P57768 344 aa12.9□□□□□ -0.34
SREBF1-215ENST00000487401 RPS14P62263 151 aaKnown RBP12.9□□□□□ -0.34
SREBF1-215ENST00000487401 CDK17Q00537 523 aa12.9□□□□□ -0.34
SREBF1-215ENST00000487401 PTK2Q05397 1052 aa12.9□□□□□ -0.34
SREBF1-215ENST00000487401 SFSWAPQ12872 951 aaKnown RBP12.9□□□□□ -0.34
SREBF1-215ENST00000487401 SLC14A1Q13336 389 aa12.9□□□□□ -0.34
SREBF1-215ENST00000487401 PDCLQ13371 301 aa12.9□□□□□ -0.34
SREBF1-215ENST00000487401 HNRNPDQ14103 355 aaKnown RBP12.9□□□□□ -0.34
SREBF1-215ENST00000487401 TTC31Q49AM3 519 aaPredicted RBP12.9□□□□□ -0.34
SREBF1-215ENST00000487401 ZC3H12AQ5D1E8 599 aaKnown RBP12.9□□□□□ -0.34
SREBF1-215ENST00000487401 CHSY1Q86X52 802 aa12.9□□□□□ -0.34
SREBF1-215ENST00000487401 LGI2Q8N0V4 545 aa12.9□□□□□ -0.34
SREBF1-215ENST00000487401 CFAP52Q8N1V2 620 aa12.9□□□□□ -0.34
SREBF1-215ENST00000487401 ZCCHC9Q8N567 271 aaKnown RBP12.9□□□□□ -0.34
SREBF1-215ENST00000487401 ATP6V0D2Q8N8Y2 350 aa12.9□□□□□ -0.34
SREBF1-215ENST00000487401 WFDC5Q8TCV5 224 aa12.9□□□□□ -0.34
SREBF1-215ENST00000487401 GANCQ8TET4 914 aa12.9□□□□□ -0.34
SREBF1-215ENST00000487401 SNX19Q92543 992 aa12.9□□□□□ -0.34
SREBF1-215ENST00000487401 RNF34Q969K3 372 aa12.9□□□□□ -0.34
SREBF1-215ENST00000487401 TTC17Q96AE7 1141 aa12.9□□□□□ -0.34
SREBF1-215ENST00000487401 BTN2A3PQ96KV6 586 aa12.9□□□□□ -0.34
SREBF1-215ENST00000487401 PRICKLE1Q96MT3 831 aaPredicted RBP12.9□□□□□ -0.34
SREBF1-215ENST00000487401 NOX5Q96PH1 765 aa12.9□□□□□ -0.34
SREBF1-215ENST00000487401 NUCKS1Q9H1E3 243 aaKnown RBP12.9□□□□□ -0.34
SREBF1-215ENST00000487401 PCED1AQ9H1Q7 454 aa12.9□□□□□ -0.34
SREBF1-215ENST00000487401 KIAA1522Q9P206 1035 aaPredicted RBP12.9□□□□□ -0.34
SREBF1-215ENST00000487401 CYTH4Q9UIA0 394 aa12.9□□□□□ -0.34
SREBF1-215ENST00000487401 NCKAP1Q9Y2A7 1128 aa12.9□□□□□ -0.34
SREBF1-215ENST00000487401 CEP83Q9Y592 693 aa12.9□□□□□ -0.34
SREBF1-215ENST00000487401 LAMA1P25391 3075 aa12.89□□□□□ -0.35
SREBF1-215ENST00000487401 GTPBP10A4D1E9 387 aaKnown RBP12.89□□□□□ -0.35
SREBF1-215ENST00000487401 TRUB2O95900 331 aaKnown RBP12.89□□□□□ -0.35
SREBF1-215ENST00000487401 SLC2A3P11169 496 aa12.89□□□□□ -0.35
SREBF1-215ENST00000487401 CD59P13987 128 aa12.89□□□□□ -0.35
SREBF1-215ENST00000487401 PON1P27169 355 aa12.89□□□□□ -0.35
SREBF1-215ENST00000487401 KRT9P35527 623 aa12.89□□□□□ -0.35
SREBF1-215ENST00000487401 APBA1Q02410 837 aa12.89□□□□□ -0.35
SREBF1-215ENST00000487401 GRIK2Q13002 908 aa12.89□□□□□ -0.35
SREBF1-215ENST00000487401 TAF5Q15542 800 aa12.89□□□□□ -0.35
SREBF1-215ENST00000487401 EFHC1Q5JVL4 640 aa12.89□□□□□ -0.35
SREBF1-215ENST00000487401 RNF219Q5W0B1 726 aaPredicted RBP12.89□□□□□ -0.35
SREBF1-215ENST00000487401 RAP1GAP2Q684P5 730 aa12.89□□□□□ -0.35
SREBF1-215ENST00000487401 ZNF776Q68DI1 518 aaPredicted RBP12.89□□□□□ -0.35
SREBF1-215ENST00000487401 IL27RAQ6UWB1 636 aa12.89□□□□□ -0.35
SREBF1-215ENST00000487401 IRF2BP1Q8IU81 584 aa12.89□□□□□ -0.35
SREBF1-215ENST00000487401 PASD1Q8IV76 773 aa12.89□□□□□ -0.35
SREBF1-215ENST00000487401 FAM114A1Q8IWE2 563 aa12.89□□□□□ -0.35
SREBF1-215ENST00000487401 MYEOVQ96EZ4 313 aa12.89□□□□□ -0.35
SREBF1-215ENST00000487401 PPP1R13BQ96KQ4 1090 aa12.89□□□□□ -0.35
SREBF1-215ENST00000487401 LMLNQ96KR4 655 aa12.89□□□□□ -0.35
SREBF1-215ENST00000487401 BTBD1Q9H0C5 482 aa12.89□□□□□ -0.35
SREBF1-215ENST00000487401 FAM204AQ9H8W3 233 aa12.89□□□□□ -0.35
SREBF1-215ENST00000487401 SGK2Q9HBY8 427 aa12.89□□□□□ -0.35
SREBF1-215ENST00000487401 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.89□□□□□ -0.35
SREBF1-215ENST00000487401 EIF2B4Q9UI10 523 aaKnown RBP12.89□□□□□ -0.35
SREBF1-215ENST00000487401 PCDHB9Q9Y5E1 797 aa12.89□□□□□ -0.35
SREBF1-215ENST00000487401 SYNJ2BP-COX16A0A087WUM0 186 aa12.88□□□□□ -0.35
SREBF1-215ENST00000487401 BECN2A8MW95 431 aa12.88□□□□□ -0.35
SREBF1-215ENST00000487401 F5H5T6 163 aa12.88□□□□□ -0.35
SREBF1-215ENST00000487401 SH3BP5O60239 455 aa12.88□□□□□ -0.35
SREBF1-215ENST00000487401 KRT37O76014 449 aa12.88□□□□□ -0.35
SREBF1-215ENST00000487401 LUC7L3O95232 432 aaKnown RBP12.88□□□□□ -0.35
SREBF1-215ENST00000487401 SEMA4FO95754 770 aa12.88□□□□□ -0.35
SREBF1-215ENST00000487401 GLI1P08151 1106 aa12.88□□□□□ -0.35
SREBF1-215ENST00000487401 SPINK2P20155 84 aa12.88□□□□□ -0.35
SREBF1-215ENST00000487401 ABCB4P21439 1286 aa12.88□□□□□ -0.35
SREBF1-215ENST00000487401 TACR2P21452 398 aa12.88□□□□□ -0.35
SREBF1-215ENST00000487401 ACSL1P33121 698 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms