RNA–Protein interactions for RNA: ENST00000486159.5

TMEM39A-208, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 826 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-208ENST00000486159 CSNK1G1Q9HCP0 422 aa9.82□□□□□ -0.84
TMEM39A-208ENST00000486159 SPHK2Q9NRA0 654 aa9.82□□□□□ -0.84
TMEM39A-208ENST00000486159 RAB20Q9NX57 234 aa9.82□□□□□ -0.84
TMEM39A-208ENST00000486159 RNF14Q9UBS8 474 aa9.82□□□□□ -0.84
TMEM39A-208ENST00000486159 ADAMTS1Q9UHI8 967 aa9.82□□□□□ -0.84
TMEM39A-208ENST00000486159 NAGPAQ9UK23 515 aa9.82□□□□□ -0.84
TMEM39A-208ENST00000486159 NENFQ9UMX5 172 aa9.82□□□□□ -0.84
TMEM39A-208ENST00000486159 A0A087X0T9 212 aa9.81□□□□□ -0.84
TMEM39A-208ENST00000486159 A0A1W2PQF6 199 aa9.81□□□□□ -0.84
TMEM39A-208ENST00000486159 NEDD8-MDP1E9PL57 170 aa9.81□□□□□ -0.84
TMEM39A-208ENST00000486159 TULP2O00295 520 aa9.81□□□□□ -0.84
TMEM39A-208ENST00000486159 SLC9A3R1O14745 358 aaPredicted RBP9.81□□□□□ -0.84
TMEM39A-208ENST00000486159 FANCGO15287 622 aa9.81□□□□□ -0.84
TMEM39A-208ENST00000486159 ADH1CP00326 375 aa9.81□□□□□ -0.84
TMEM39A-208ENST00000486159 KLKB1P03952 638 aa9.81□□□□□ -0.84
TMEM39A-208ENST00000486159 NUDT7P0C024 238 aa9.81□□□□□ -0.84
TMEM39A-208ENST00000486159 H2AFZP0C0S5 128 aa9.81□□□□□ -0.84
TMEM39A-208ENST00000486159 FAM228BP0C875 321 aa9.81□□□□□ -0.84
TMEM39A-208ENST00000486159 TCP1P17987 556 aaKnown RBP9.81□□□□□ -0.84
TMEM39A-208ENST00000486159 GABRG2P18507 467 aa9.81□□□□□ -0.84
TMEM39A-208ENST00000486159 ACO1P21399 889 aaKnown RBP9.81□□□□□ -0.84
TMEM39A-208ENST00000486159 P2RY2P41231 377 aa9.81□□□□□ -0.84
TMEM39A-208ENST00000486159 GRIA2P42262 883 aa9.81□□□□□ -0.84
TMEM39A-208ENST00000486159 TNFRSF4P43489 277 aa9.81□□□□□ -0.84
TMEM39A-208ENST00000486159 BPIFB4P59827 614 aa9.81□□□□□ -0.84
TMEM39A-208ENST00000486159 UAP1L1Q3KQV9 507 aa9.81□□□□□ -0.84
TMEM39A-208ENST00000486159 PPP1R26Q5T8A7 1209 aaPredicted RBP9.81□□□□□ -0.84
TMEM39A-208ENST00000486159 PPP1R2P3Q6NXS1 205 aa9.81□□□□□ -0.84
TMEM39A-208ENST00000486159 ALKBH5Q6P6C2 394 aaKnown RBP9.81□□□□□ -0.84
TMEM39A-208ENST00000486159 H2AFVQ71UI9 128 aa9.81□□□□□ -0.84
TMEM39A-208ENST00000486159 ZNF571Q7Z3V5 609 aaPredicted RBP9.81□□□□□ -0.84
TMEM39A-208ENST00000486159 FAM71AQ8IYT1 594 aa9.81□□□□□ -0.84
TMEM39A-208ENST00000486159 PGBD3Q8N328 593 aa9.81□□□□□ -0.84
TMEM39A-208ENST00000486159 PDZD8Q8NEN9 1154 aa9.81□□□□□ -0.84
TMEM39A-208ENST00000486159 OR2I1PQ8NGU4 316 aa9.81□□□□□ -0.84
TMEM39A-208ENST00000486159 SLC30A5Q8TAD4 765 aa9.81□□□□□ -0.84
TMEM39A-208ENST00000486159 OVCA2Q8WZ82 227 aa9.81□□□□□ -0.84
TMEM39A-208ENST00000486159 ANKRD7Q92527 254 aa9.81□□□□□ -0.84
TMEM39A-208ENST00000486159 SHC3Q92529 594 aa9.81□□□□□ -0.84
TMEM39A-208ENST00000486159 EXOC4Q96A65 974 aa9.81□□□□□ -0.84
TMEM39A-208ENST00000486159 CYFIP2Q96F07 1278 aa9.81□□□□□ -0.84
TMEM39A-208ENST00000486159 FAXDC2Q96IV6 333 aa9.81□□□□□ -0.84
TMEM39A-208ENST00000486159 HNRNPABQ99729 332 aaKnown RBP9.81□□□□□ -0.84
TMEM39A-208ENST00000486159 ARID3AQ99856 593 aa9.81□□□□□ -0.84
TMEM39A-208ENST00000486159 IRX2Q9BZI1 471 aaPredicted RBP9.81□□□□□ -0.84
TMEM39A-208ENST00000486159 CD248Q9HCU0 757 aa9.81□□□□□ -0.84
TMEM39A-208ENST00000486159 UBE2TQ9NPD8 197 aaPredicted RBP9.81□□□□□ -0.84
TMEM39A-208ENST00000486159 EHD2Q9NZN4 543 aa9.81□□□□□ -0.84
TMEM39A-208ENST00000486159 BCCIPQ9P287 314 aaKnown RBP eCLIP9.81□□□□□ -0.84
TMEM39A-208ENST00000486159 TBC1D14Q9P2M4 693 aa9.81□□□□□ -0.84
TMEM39A-208ENST00000486159 CLEC4EQ9ULY5 219 aa9.81□□□□□ -0.84
TMEM39A-208ENST00000486159 SAR1BQ9Y6B6 198 aa9.81□□□□□ -0.84
TMEM39A-208ENST00000486159 ZFYVE26Q68DK2 2539 aa9.81□□□□□ -0.84
TMEM39A-208ENST00000486159 RCCD1A6NED2 376 aa9.8□□□□□ -0.84
TMEM39A-208ENST00000486159 HOXC11O43248 304 aaPredicted RBP9.8□□□□□ -0.84
TMEM39A-208ENST00000486159 HMBSP08397 361 aa9.8□□□□□ -0.84
TMEM39A-208ENST00000486159 CISD3P0C7P0 127 aa9.8□□□□□ -0.84
TMEM39A-208ENST00000486159 FAM200BP0CF97 657 aa9.8□□□□□ -0.84
TMEM39A-208ENST00000486159 GZMAP12544 262 aa9.8□□□□□ -0.84
TMEM39A-208ENST00000486159 RARGP13631 454 aa9.8□□□□□ -0.84
TMEM39A-208ENST00000486159 TYRP14679 529 aa9.8□□□□□ -0.84
TMEM39A-208ENST00000486159 TNFAIP3P21580 790 aa9.8□□□□□ -0.84
TMEM39A-208ENST00000486159 ITPKAP23677 461 aa9.8□□□□□ -0.84
TMEM39A-208ENST00000486159 TBXAS1P24557 533 aaPredicted RBP9.8□□□□□ -0.84
TMEM39A-208ENST00000486159 EIF2DP41214 584 aaKnown RBP9.8□□□□□ -0.84
TMEM39A-208ENST00000486159 MAPK8P45983 427 aa9.8□□□□□ -0.84
TMEM39A-208ENST00000486159 NOVA1P51513 510 aaKnown RBP9.8□□□□□ -0.84
TMEM39A-208ENST00000486159 APBA1Q02410 837 aa9.8□□□□□ -0.84
TMEM39A-208ENST00000486159 ARID5AQ03989 594 aa9.8□□□□□ -0.84
TMEM39A-208ENST00000486159 TCEAL1Q15170 157 aa9.8□□□□□ -0.84
TMEM39A-208ENST00000486159 SH3PXD2AQ5TCZ1 1133 aa9.8□□□□□ -0.84
TMEM39A-208ENST00000486159 HTR3DQ70Z44 454 aa9.8□□□□□ -0.84
TMEM39A-208ENST00000486159 CYP2U1Q7Z449 544 aa9.8□□□□□ -0.84
TMEM39A-208ENST00000486159 DDX42Q86XP3 938 aaKnown RBP eCLIP9.8□□□□□ -0.84
TMEM39A-208ENST00000486159 ZNF513Q8N8E2 541 aaPredicted RBP9.8□□□□□ -0.84
TMEM39A-208ENST00000486159 TERB1Q8NA31 727 aa9.8□□□□□ -0.84
TMEM39A-208ENST00000486159 GOLGA1Q92805 767 aa9.8□□□□□ -0.84
TMEM39A-208ENST00000486159 SYT11Q9BT88 431 aa9.8□□□□□ -0.84
TMEM39A-208ENST00000486159 CARD6Q9BX69 1037 aa9.8□□□□□ -0.84
TMEM39A-208ENST00000486159 BBS2Q9BXC9 721 aa9.8□□□□□ -0.84
TMEM39A-208ENST00000486159 NACA2Q9H009 215 aa9.8□□□□□ -0.84
TMEM39A-208ENST00000486159 DNAJC17Q9NVM6 304 aaKnown RBP9.8□□□□□ -0.84
TMEM39A-208ENST00000486159 DEC1Q9P2X7 70 aa9.8□□□□□ -0.84
TMEM39A-208ENST00000486159 SCML2Q9UQR0 700 aa9.8□□□□□ -0.84
TMEM39A-208ENST00000486159 ASH1LQ9NR48 2969 aaKnown RBP9.79□□□□□ -0.84
TMEM39A-208ENST00000486159 A0A0U1RQJ8 604 aa9.79□□□□□ -0.84
TMEM39A-208ENST00000486159 MACROD2A1Z1Q3 448 aa9.79□□□□□ -0.84
TMEM39A-208ENST00000486159 CTAGE15A4D2H0 777 aa9.79□□□□□ -0.84
TMEM39A-208ENST00000486159 C1QTNF9BB2RNN3 333 aa9.79□□□□□ -0.84
TMEM39A-208ENST00000486159 FOXN3O00409 490 aaPredicted RBP9.79□□□□□ -0.84
TMEM39A-208ENST00000486159 CES2O00748 559 aa9.79□□□□□ -0.84
TMEM39A-208ENST00000486159 KHNYNO15037 678 aaKnown RBP9.79□□□□□ -0.84
TMEM39A-208ENST00000486159 CILPO75339 1184 aa9.79□□□□□ -0.84
TMEM39A-208ENST00000486159 CALCAP01258 141 aa9.79□□□□□ -0.84
TMEM39A-208ENST00000486159 TMEM253P0C7T8 217 aa9.79□□□□□ -0.84
TMEM39A-208ENST00000486159 C1QTNF9P0C862 333 aa9.79□□□□□ -0.84
TMEM39A-208ENST00000486159 CTAGE8P0CG41 777 aa9.79□□□□□ -0.84
TMEM39A-208ENST00000486159 HOXB2P14652 356 aa9.79□□□□□ -0.84
TMEM39A-208ENST00000486159 NDUFV2P19404 249 aa9.79□□□□□ -0.84
TMEM39A-208ENST00000486159 ATP5C1P36542 298 aaKnown RBP9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms