RNA–Protein interactions for RNA: ENST00000483888.6

COL12A1-207, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL12A1, Length 9,637 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-207ENST00000483888 CIR1Q86X95 450 aaPredicted RBP10.47□□□□□ -0.73
COL12A1-207ENST00000483888 SH3BP4Q9P0V3 963 aa10.47□□□□□ -0.73
COL12A1-207ENST00000483888 PRKAG3Q9UGI9 489 aa10.47□□□□□ -0.73
COL12A1-207ENST00000483888 SCN1BQ07699 218 aa10.47□□□□□ -0.73
COL12A1-207ENST00000483888 PTK6Q13882 451 aa10.47□□□□□ -0.73
COL12A1-207ENST00000483888 GLRA4Q5JXX5 417 aa10.47□□□□□ -0.73
COL12A1-207ENST00000483888 OGFOD2Q6N063 350 aa10.47□□□□□ -0.73
COL12A1-207ENST00000483888 KRT28Q7Z3Y7 464 aa10.47□□□□□ -0.73
COL12A1-207ENST00000483888 PSMD12O00232 456 aaPredicted RBP10.46□□□□□ -0.73
COL12A1-207ENST00000483888 PDXKO00764 312 aa10.46□□□□□ -0.73
COL12A1-207ENST00000483888 BNIP3LO60238 219 aa10.46□□□□□ -0.73
COL12A1-207ENST00000483888 COX4I1P13073 169 aa10.46□□□□□ -0.73
COL12A1-207ENST00000483888 PNPT1Q8TCS8 783 aaKnown RBP10.46□□□□□ -0.73
COL12A1-207ENST00000483888 SAV1Q9H4B6 383 aaPredicted RBP10.46□□□□□ -0.73
COL12A1-207ENST00000483888 FBXO6Q9NRD1 293 aaPredicted RBP10.46□□□□□ -0.73
COL12A1-207ENST00000483888 SLC16A4O15374 487 aa10.46□□□□□ -0.73
COL12A1-207ENST00000483888 TPBGLP0DKB5 382 aa10.46□□□□□ -0.73
COL12A1-207ENST00000483888 MYBPC1Q00872 1141 aa10.46□□□□□ -0.73
COL12A1-207ENST00000483888 PRKAA1Q13131 559 aa10.46□□□□□ -0.73
COL12A1-207ENST00000483888 ELMO1Q92556 727 aa10.46□□□□□ -0.73
COL12A1-207ENST00000483888 SPAG4Q9NPE6 437 aa10.46□□□□□ -0.73
COL12A1-207ENST00000483888 SCGNO76038 276 aa10.46□□□□□ -0.73
COL12A1-207ENST00000483888 FADS2O95864 444 aaKnown RBP10.46□□□□□ -0.73
COL12A1-207ENST00000483888 SERPINA6P08185 405 aa10.46□□□□□ -0.73
COL12A1-207ENST00000483888 ADRA1DP25100 572 aa10.46□□□□□ -0.73
COL12A1-207ENST00000483888 ORC2Q13416 577 aaPredicted RBP10.46□□□□□ -0.73
COL12A1-207ENST00000483888 LCN1P1Q5VSP4 162 aa10.46□□□□□ -0.73
COL12A1-207ENST00000483888 ANKS6Q68DC2 871 aa10.46□□□□□ -0.73
COL12A1-207ENST00000483888 CHCHD4Q8N4Q1 142 aa10.46□□□□□ -0.73
COL12A1-207ENST00000483888 MREGQ8N565 214 aa10.46□□□□□ -0.73
COL12A1-207ENST00000483888 TRNT1Q96Q11 434 aaKnown RBP10.46□□□□□ -0.73
COL12A1-207ENST00000483888 POLR3BQ9NW08 1133 aaPredicted RBP10.46□□□□□ -0.73
COL12A1-207ENST00000483888 GRHL1Q9NZI5 618 aa10.46□□□□□ -0.73
COL12A1-207ENST00000483888 SPASTQ9UBP0 616 aa10.46□□□□□ -0.73
COL12A1-207ENST00000483888 KDM5BQ9UGL1 1544 aa10.46□□□□□ -0.73
COL12A1-207ENST00000483888 ECT2LQ008S8 904 aa10.46□□□□□ -0.73
COL12A1-207ENST00000483888 FRG1Q14331 258 aaKnown RBP10.46□□□□□ -0.73
COL12A1-207ENST00000483888 PIK3R3Q92569 461 aa10.46□□□□□ -0.73
COL12A1-207ENST00000483888 WDR6Q9NNW5 1121 aaKnown RBP10.46□□□□□ -0.73
COL12A1-207ENST00000483888 PACSIN3Q9UKS6 424 aa10.46□□□□□ -0.73
COL12A1-207ENST00000483888 MAST1Q9Y2H9 1570 aa10.46□□□□□ -0.73
COL12A1-207ENST00000483888 BOLA2-SMG1P6H3BVE0 249 aa10.46□□□□□ -0.74
COL12A1-207ENST00000483888 B3GALNT1O75752 331 aa10.46□□□□□ -0.74
COL12A1-207ENST00000483888 ASNSP08243 561 aa10.46□□□□□ -0.74
COL12A1-207ENST00000483888 ETS1P14921 441 aa10.46□□□□□ -0.74
COL12A1-207ENST00000483888 AQP4P55087 323 aa10.46□□□□□ -0.74
COL12A1-207ENST00000483888 NPEPPSP55786 919 aa10.46□□□□□ -0.74
COL12A1-207ENST00000483888 PDK4Q16654 411 aa10.46□□□□□ -0.74
COL12A1-207ENST00000483888 DSTYKQ6XUX3 929 aa10.46□□□□□ -0.74
COL12A1-207ENST00000483888 IQCF2Q8IXL9 164 aa10.46□□□□□ -0.74
COL12A1-207ENST00000483888 SYNPOQ8N3V7 929 aa10.46□□□□□ -0.74
COL12A1-207ENST00000483888 RBM17Q96I25 401 aaKnown RBP10.46□□□□□ -0.74
COL12A1-207ENST00000483888 TCF12Q99081 682 aa10.46□□□□□ -0.74
COL12A1-207ENST00000483888 SLC6A15Q9H2J7 730 aa10.46□□□□□ -0.74
COL12A1-207ENST00000483888 FARSBQ9NSD9 589 aaKnown RBP10.46□□□□□ -0.74
COL12A1-207ENST00000483888 C3orf18Q9UK00 162 aa10.46□□□□□ -0.74
COL12A1-207ENST00000483888 IKZF3Q9UKT9 509 aa10.46□□□□□ -0.74
COL12A1-207ENST00000483888 CLASP1Q7Z460 1538 aa10.46□□□□□ -0.74
COL12A1-207ENST00000483888 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.46□□□□□ -0.74
COL12A1-207ENST00000483888 GPN1Q9HCN4 374 aaPredicted RBP10.46□□□□□ -0.74
COL12A1-207ENST00000483888 CCDC177Q9NQR7 707 aaPredicted RBP10.46□□□□□ -0.74
COL12A1-207ENST00000483888 CLN6Q9NWW5 311 aa10.46□□□□□ -0.74
COL12A1-207ENST00000483888 A2MP01023 1474 aa10.46□□□□□ -0.74
COL12A1-207ENST00000483888 SOAT2O75908 522 aa10.46□□□□□ -0.74
COL12A1-207ENST00000483888 GPC3P51654 580 aa10.46□□□□□ -0.74
COL12A1-207ENST00000483888 PON2Q15165 354 aa10.46□□□□□ -0.74
COL12A1-207ENST00000483888 PCSK7Q16549 785 aa10.46□□□□□ -0.74
COL12A1-207ENST00000483888 SYCE2Q6PIF2 218 aa10.46□□□□□ -0.74
COL12A1-207ENST00000483888 DEF8Q6ZN54 512 aa10.46□□□□□ -0.74
COL12A1-207ENST00000483888 PCDH20Q8N6Y1 951 aaKnown RBP10.46□□□□□ -0.74
COL12A1-207ENST00000483888 PTCD3Q96EY7 689 aaKnown RBP10.46□□□□□ -0.74
COL12A1-207ENST00000483888 MARK4Q96L34 752 aa10.46□□□□□ -0.74
COL12A1-207ENST00000483888 TIPINQ9BVW5 301 aa10.46□□□□□ -0.74
COL12A1-207ENST00000483888 CXorf21Q9HAI6 301 aa10.46□□□□□ -0.74
COL12A1-207ENST00000483888 MAP3K15Q6ZN16 1313 aa10.46□□□□□ -0.74
COL12A1-207ENST00000483888 RXRGP48443 463 aa10.46□□□□□ -0.74
COL12A1-207ENST00000483888 HIRAP54198 1017 aaPredicted RBP10.46□□□□□ -0.74
COL12A1-207ENST00000483888 EIF1ADQ8N9N8 165 aaKnown RBP10.46□□□□□ -0.74
COL12A1-207ENST00000483888 TFB1MQ8WVM0 346 aaKnown RBP10.46□□□□□ -0.74
COL12A1-207ENST00000483888 TMEM121Q9BTD3 319 aa10.46□□□□□ -0.74
COL12A1-207ENST00000483888 TBX1O43435 398 aa10.45□□□□□ -0.74
COL12A1-207ENST00000483888 CAPZA2P47755 286 aa10.45□□□□□ -0.74
COL12A1-207ENST00000483888 TBC1D10CQ8IV04 446 aa10.45□□□□□ -0.74
COL12A1-207ENST00000483888 SLC44A2Q8IWA5 706 aaPredicted RBP10.45□□□□□ -0.74
COL12A1-207ENST00000483888 CCDC24Q8N4L8 307 aa10.45□□□□□ -0.74
COL12A1-207ENST00000483888 ACSF2Q96CM8 615 aaPredicted RBP10.45□□□□□ -0.74
COL12A1-207ENST00000483888 NOL11Q9H8H0 719 aaKnown RBP10.45□□□□□ -0.74
COL12A1-207ENST00000483888 EBF2Q9HAK2 575 aa10.45□□□□□ -0.74
COL12A1-207ENST00000483888 GPR108Q9NPR9 543 aa10.45□□□□□ -0.74
COL12A1-207ENST00000483888 CHST12Q9NRB3 414 aa10.45□□□□□ -0.74
COL12A1-207ENST00000483888 A0A0A6YYK5 440 aaPredicted RBP10.45□□□□□ -0.74
COL12A1-207ENST00000483888 THEGLP0DJG4 465 aa10.45□□□□□ -0.74
COL12A1-207ENST00000483888 HOXA13P31271 388 aaPredicted RBP10.45□□□□□ -0.74
COL12A1-207ENST00000483888 HOXD12P35452 270 aa10.45□□□□□ -0.74
COL12A1-207ENST00000483888 IDH2P48735 452 aaKnown RBP10.45□□□□□ -0.74
COL12A1-207ENST00000483888 DLG1Q12959 904 aa10.45□□□□□ -0.74
COL12A1-207ENST00000483888 SLC4A5Q9BY07 1137 aa10.45□□□□□ -0.74
COL12A1-207ENST00000483888 EPB41L4BQ9H329 900 aa10.45□□□□□ -0.74
COL12A1-207ENST00000483888 EXD2Q9NVH0 621 aa10.45□□□□□ -0.74
COL12A1-207ENST00000483888 EFR3BQ9Y2G0 817 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms