RNA–Protein interactions for RNA: ENST00000483448.1

SYPL1-206, Transcript of synaptophysin like 1, humanhuman

TSL 4

Gene SYPL1, Length 478 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYPL1-206ENST00000483448 FOXJ1Q92949 421 aa22.33■■□□□ 1.17
SYPL1-206ENST00000483448 TOE1Q96GM8 510 aaKnown RBP22.33■■□□□ 1.17
SYPL1-206ENST00000483448 SLC39A13Q96H72 371 aa22.33■■□□□ 1.17
SYPL1-206ENST00000483448 CPXM1Q96SM3 734 aa22.33■■□□□ 1.17
SYPL1-206ENST00000483448 NUCKS1Q9H1E3 243 aaKnown RBP22.33■■□□□ 1.17
SYPL1-206ENST00000483448 FAM204AQ9H8W3 233 aa22.33■■□□□ 1.17
SYPL1-206ENST00000483448 SAMSN1Q9NSI8 373 aaKnown RBP22.33■■□□□ 1.17
SYPL1-206ENST00000483448 COX16Q9P0S2 106 aa22.33■■□□□ 1.17
SYPL1-206ENST00000483448 PCDHGC3Q9UN70 934 aa22.33■■□□□ 1.17
SYPL1-206ENST00000483448 SLC6A14Q9UN76 642 aa22.33■■□□□ 1.17
SYPL1-206ENST00000483448 CEP83Q9Y592 693 aa22.33■■□□□ 1.17
SYPL1-206ENST00000483448 GON4LQ3T8J9 2241 aa22.33■■□□□ 1.16
SYPL1-206ENST00000483448 CDX4O14627 284 aaPredicted RBP22.32■■□□□ 1.16
SYPL1-206ENST00000483448 DLDP09622 509 aaKnown RBP22.32■■□□□ 1.16
SYPL1-206ENST00000483448 ENGP17813 658 aa22.32■■□□□ 1.16
SYPL1-206ENST00000483448 OXTRP30559 389 aa22.32■■□□□ 1.16
SYPL1-206ENST00000483448 BPIFB4P59827 614 aa22.32■■□□□ 1.16
SYPL1-206ENST00000483448 GFPT1Q06210 699 aaPredicted RBP22.32■■□□□ 1.16
SYPL1-206ENST00000483448 MS4A13Q5J8X5 152 aa22.32■■□□□ 1.16
SYPL1-206ENST00000483448 MIIPQ5JXC2 388 aa22.32■■□□□ 1.16
SYPL1-206ENST00000483448 SLC23A3Q6PIS1 610 aa22.32■■□□□ 1.16
SYPL1-206ENST00000483448 RABEPKQ7Z6M1 372 aa22.32■■□□□ 1.16
SYPL1-206ENST00000483448 KIAA0907Q7Z7F0 614 aaPredicted RBP22.32■■□□□ 1.16
SYPL1-206ENST00000483448 SLC47A2Q86VL8 602 aa22.32■■□□□ 1.16
SYPL1-206ENST00000483448 CHSY1Q86X52 802 aa22.32■■□□□ 1.16
SYPL1-206ENST00000483448 ATP6V0D2Q8N8Y2 350 aa22.32■■□□□ 1.16
SYPL1-206ENST00000483448 C1orf131Q8NDD1 294 aaKnown RBP22.32■■□□□ 1.16
SYPL1-206ENST00000483448 FIBINQ8TAL6 211 aa22.32■■□□□ 1.16
SYPL1-206ENST00000483448 ZNF419Q96HQ0 510 aaPredicted RBP22.32■■□□□ 1.16
SYPL1-206ENST00000483448 GTPBP2Q9BX10 602 aaKnown RBP22.32■■□□□ 1.16
SYPL1-206ENST00000483448 LHX5Q9H2C1 402 aa22.32■■□□□ 1.16
SYPL1-206ENST00000483448 H0Y626 953 aa22.31■■□□□ 1.16
SYPL1-206ENST00000483448 GRAP2O75791 330 aa22.31■■□□□ 1.16
SYPL1-206ENST00000483448 KCNK5O95279 499 aa22.31■■□□□ 1.16
SYPL1-206ENST00000483448 CLCN1P35523 988 aa22.31■■□□□ 1.16
SYPL1-206ENST00000483448 TPMTP51580 245 aa22.31■■□□□ 1.16
SYPL1-206ENST00000483448 COPAP53621 1224 aa22.31■■□□□ 1.16
SYPL1-206ENST00000483448 ST8SIA6P61647 398 aa22.31■■□□□ 1.16
SYPL1-206ENST00000483448 CDH18Q13634 790 aa22.31■■□□□ 1.16
SYPL1-206ENST00000483448 CT47A1Q5JQC4 288 aaPredicted RBP22.31■■□□□ 1.16
SYPL1-206ENST00000483448 WDR45BQ5MNZ6 344 aa22.31■■□□□ 1.16
SYPL1-206ENST00000483448 N4BP2L1Q5TBK1 243 aaPredicted RBP22.31■■□□□ 1.16
SYPL1-206ENST00000483448 RAP1GAP2Q684P5 730 aa22.31■■□□□ 1.16
SYPL1-206ENST00000483448 PSAPL1Q6NUJ1 521 aa22.31■■□□□ 1.16
SYPL1-206ENST00000483448 CLEC17AQ6ZS10 378 aa22.31■■□□□ 1.16
SYPL1-206ENST00000483448 C11orf57Q6ZUT1 292 aaPredicted RBP22.31■■□□□ 1.16
SYPL1-206ENST00000483448 DEFB106AQ8N104 65 aa22.31■■□□□ 1.16
SYPL1-206ENST00000483448 OR2T3Q8NH03 318 aa22.31■■□□□ 1.16
SYPL1-206ENST00000483448 MYEOVQ96EZ4 313 aa22.31■■□□□ 1.16
SYPL1-206ENST00000483448 BTN2A3PQ96KV6 586 aa22.31■■□□□ 1.16
SYPL1-206ENST00000483448 PRICKLE1Q96MT3 831 aaPredicted RBP22.31■■□□□ 1.16
SYPL1-206ENST00000483448 GBP4Q96PP9 640 aa22.31■■□□□ 1.16
SYPL1-206ENST00000483448 GPR174Q9BXC1 333 aa22.31■■□□□ 1.16
SYPL1-206ENST00000483448 PLCB1Q9NQ66 1216 aa22.31■■□□□ 1.16
SYPL1-206ENST00000483448 FSCN3Q9NQT6 498 aa22.31■■□□□ 1.16
SYPL1-206ENST00000483448 SLTMQ9NWH9 1034 aaKnown RBP eCLIP22.31■■□□□ 1.16
SYPL1-206ENST00000483448 WSB2Q9NYS7 404 aaPredicted RBP22.31■■□□□ 1.16
SYPL1-206ENST00000483448 USP36Q9P275 1121 aaKnown RBP22.31■■□□□ 1.16
SYPL1-206ENST00000483448 SUN2Q9UH99 717 aa22.31■■□□□ 1.16
SYPL1-206ENST00000483448 XPO7Q9UIA9 1087 aaKnown RBP22.31■■□□□ 1.16
SYPL1-206ENST00000483448 PLXND1Q9Y4D7 1925 aa22.31■■□□□ 1.16
SYPL1-206ENST00000483448 MEI4A8MW99 385 aa22.3■■□□□ 1.16
SYPL1-206ENST00000483448 GLI1P08151 1106 aa22.3■■□□□ 1.16
SYPL1-206ENST00000483448 SERPINF2P08697 491 aa22.3■■□□□ 1.16
SYPL1-206ENST00000483448 ABCB4P21439 1286 aa22.3■■□□□ 1.16
SYPL1-206ENST00000483448 TACR2P21452 398 aa22.3■■□□□ 1.16
SYPL1-206ENST00000483448 MAOBP27338 520 aa22.3■■□□□ 1.16
SYPL1-206ENST00000483448 NOVA1P51513 510 aaKnown RBP22.3■■□□□ 1.16
SYPL1-206ENST00000483448 PITX1P78337 314 aaPredicted RBP22.3■■□□□ 1.16
SYPL1-206ENST00000483448 DRAP1Q14919 205 aaPredicted RBP22.3■■□□□ 1.16
SYPL1-206ENST00000483448 TCP11X2Q5H9J9 407 aa22.3■■□□□ 1.16
SYPL1-206ENST00000483448 SMYD5Q6GMV2 418 aa22.3■■□□□ 1.16
SYPL1-206ENST00000483448 FAM124AQ86V42 546 aa22.3■■□□□ 1.16
SYPL1-206ENST00000483448 NUP58Q9BVL2 599 aa22.3■■□□□ 1.16
SYPL1-206ENST00000483448 TMEM245Q9H330 911 aa22.3■■□□□ 1.16
SYPL1-206ENST00000483448 DDIT4Q9NX09 232 aa22.3■■□□□ 1.16
SYPL1-206ENST00000483448 NFE2L3Q9Y4A8 694 aa22.3■■□□□ 1.16
SYPL1-206ENST00000483448 HSF2BPO75031 334 aa22.29■■□□□ 1.16
SYPL1-206ENST00000483448 SLC2A3P11169 496 aa22.29■■□□□ 1.16
SYPL1-206ENST00000483448 GNSP15586 552 aa22.29■■□□□ 1.16
SYPL1-206ENST00000483448 CAMK2GQ13555 558 aaPredicted RBP22.29■■□□□ 1.16
SYPL1-206ENST00000483448 PTPRNQ16849 979 aa22.29■■□□□ 1.16
SYPL1-206ENST00000483448 KLHDC7AQ5VTJ3 777 aa22.29■■□□□ 1.16
SYPL1-206ENST00000483448 PEAR1Q5VY43 1037 aaPredicted RBP22.29■■□□□ 1.16
SYPL1-206ENST00000483448 FAM183BPQ6ZVS7 135 aa22.29■■□□□ 1.16
SYPL1-206ENST00000483448 FAM71AQ8IYT1 594 aa22.29■■□□□ 1.16
SYPL1-206ENST00000483448 MIR1-1HGQ9H1L0 117 aa22.29■■□□□ 1.16
SYPL1-206ENST00000483448 ASNSD1Q9NWL6 643 aa22.29■■□□□ 1.16
SYPL1-206ENST00000483448 TAB2Q9NYJ8 693 aa22.29■■□□□ 1.16
SYPL1-206ENST00000483448 KCNU1A8MYU2 1149 aa22.28■■□□□ 1.16
SYPL1-206ENST00000483448 F5H5T6 163 aa22.28■■□□□ 1.16
SYPL1-206ENST00000483448 MOCS3O95396 460 aa22.28■■□□□ 1.16
SYPL1-206ENST00000483448 ERBB2P04626 1255 aa22.28■■□□□ 1.16
SYPL1-206ENST00000483448 TPM2P07951 284 aa22.28■■□□□ 1.16
SYPL1-206ENST00000483448 EEF1GP26641 437 aaKnown RBP22.28■■□□□ 1.16
SYPL1-206ENST00000483448 CSKP41240 450 aa22.28■■□□□ 1.16
SYPL1-206ENST00000483448 KCNMA1Q12791 1236 aa22.28■■□□□ 1.16
SYPL1-206ENST00000483448 NME3Q13232 169 aa22.28■■□□□ 1.16
SYPL1-206ENST00000483448 PLEKHG6Q3KR16 790 aa22.28■■□□□ 1.16
SYPL1-206ENST00000483448 SH3PXD2AQ5TCZ1 1133 aa22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms