RNA–Protein interactions for RNA: ENST00000483415.5

EWSR1-217, Transcript of EWS RNA binding protein 1, humanhuman

TSL 1 (best)

Gene EWSR1, Length 3,231 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-217ENST00000483415 PCDHB18PQ96TA0 734 aa11.15□□□□□ -0.62
EWSR1-217ENST00000483415 CORO1BQ9BR76 489 aa11.15□□□□□ -0.62
EWSR1-217ENST00000483415 PRO3102Q9H379 93 aa11.15□□□□□ -0.62
EWSR1-217ENST00000483415 ZNF212Q9UDV6 495 aa11.15□□□□□ -0.62
EWSR1-217ENST00000483415 INPP5FQ9Y2H2 1132 aa11.15□□□□□ -0.62
EWSR1-217ENST00000483415 NME7Q9Y5B8 376 aa11.15□□□□□ -0.62
EWSR1-217ENST00000483415 NUP210Q8TEM1 1887 aaPredicted RBP11.15□□□□□ -0.62
EWSR1-217ENST00000483415 GLUD2P49448 558 aa11.15□□□□□ -0.62
EWSR1-217ENST00000483415 RAB33AQ14088 237 aa11.15□□□□□ -0.62
EWSR1-217ENST00000483415 ZNF554Q86TJ5 538 aa11.15□□□□□ -0.62
EWSR1-217ENST00000483415 C10orf82Q8WW14 230 aa11.15□□□□□ -0.62
EWSR1-217ENST00000483415 TWNKQ96RR1 684 aa11.15□□□□□ -0.62
EWSR1-217ENST00000483415 GOLGA2P5Q9HBQ8 144 aa11.15□□□□□ -0.62
EWSR1-217ENST00000483415 PARVAQ9NVD7 372 aa11.15□□□□□ -0.62
EWSR1-217ENST00000483415 DPP7Q9UHL4 492 aa11.15□□□□□ -0.62
EWSR1-217ENST00000483415 ZMYM5Q9UJ78 669 aa11.15□□□□□ -0.62
EWSR1-217ENST00000483415 KIF26AQ9ULI4 1882 aaPredicted RBP11.15□□□□□ -0.63
EWSR1-217ENST00000483415 B4GALT3O60512 393 aa11.14□□□□□ -0.63
EWSR1-217ENST00000483415 ABLIM3O94929 683 aa11.14□□□□□ -0.63
EWSR1-217ENST00000483415 IDO1P14902 403 aa11.14□□□□□ -0.63
EWSR1-217ENST00000483415 NPR3P17342 541 aa11.14□□□□□ -0.63
EWSR1-217ENST00000483415 HOXA9P31269 272 aa11.14□□□□□ -0.63
EWSR1-217ENST00000483415 BMPR1AP36894 532 aa11.14□□□□□ -0.63
EWSR1-217ENST00000483415 EMP3P54852 163 aa11.14□□□□□ -0.63
EWSR1-217ENST00000483415 AIF1P55008 147 aa11.14□□□□□ -0.63
EWSR1-217ENST00000483415 CCDC6Q16204 474 aa11.14□□□□□ -0.63
EWSR1-217ENST00000483415 PPP2R5EQ16537 467 aa11.14□□□□□ -0.63
EWSR1-217ENST00000483415 VARS2Q5ST30 1063 aaKnown RBP11.14□□□□□ -0.63
EWSR1-217ENST00000483415 NCCRP1Q6ZVX7 275 aaPredicted RBP11.14□□□□□ -0.63
EWSR1-217ENST00000483415 TFAP2BQ92481 460 aa11.14□□□□□ -0.63
EWSR1-217ENST00000483415 ART4Q93070 314 aa11.14□□□□□ -0.63
EWSR1-217ENST00000483415 OLFM3Q96PB7 478 aa11.14□□□□□ -0.63
EWSR1-217ENST00000483415 YME1L1Q96TA2 773 aa11.14□□□□□ -0.63
EWSR1-217ENST00000483415 CDCA3Q99618 268 aaPredicted RBP11.14□□□□□ -0.63
EWSR1-217ENST00000483415 ZSWIM1Q9BR11 485 aa11.14□□□□□ -0.63
EWSR1-217ENST00000483415 PITPNM3Q9BZ71 974 aa11.14□□□□□ -0.63
EWSR1-217ENST00000483415 EPB41L1Q9H4G0 881 aa11.14□□□□□ -0.63
EWSR1-217ENST00000483415 NGRNQ9NPE2 291 aaKnown RBP11.14□□□□□ -0.63
EWSR1-217ENST00000483415 CNGB3Q9NQW8 809 aa11.14□□□□□ -0.63
EWSR1-217ENST00000483415 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.14□□□□□ -0.63
EWSR1-217ENST00000483415 AFF4Q9UHB7 1163 aaKnown RBP11.14□□□□□ -0.63
EWSR1-217ENST00000483415 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.14□□□□□ -0.63
EWSR1-217ENST00000483415 RASSF2P50749 326 aa11.14□□□□□ -0.63
EWSR1-217ENST00000483415 AFF1P51825 1210 aaKnown RBP11.14□□□□□ -0.63
EWSR1-217ENST00000483415 ZNF135P52742 658 aaPredicted RBP11.14□□□□□ -0.63
EWSR1-217ENST00000483415 PM20D1Q6GTS8 502 aa11.14□□□□□ -0.63
EWSR1-217ENST00000483415 ZNF449Q6P9G9 518 aa11.14□□□□□ -0.63
EWSR1-217ENST00000483415 GLYCTKQ8IVS8 523 aa11.14□□□□□ -0.63
EWSR1-217ENST00000483415 HEXIM2Q96MH2 286 aaKnown RBP11.14□□□□□ -0.63
EWSR1-217ENST00000483415 C11orf84Q9BUA3 381 aaPredicted RBP11.14□□□□□ -0.63
EWSR1-217ENST00000483415 TTLL2Q9BWV7 592 aa11.14□□□□□ -0.63
EWSR1-217ENST00000483415 DNAJB4Q9UDY4 337 aa11.14□□□□□ -0.63
EWSR1-217ENST00000483415 TSPAN16Q9UKR8 245 aa11.14□□□□□ -0.63
EWSR1-217ENST00000483415 SH3GLB1Q9Y371 365 aa11.14□□□□□ -0.63
EWSR1-217ENST00000483415 PCDHB5Q9Y5E4 795 aa11.14□□□□□ -0.63
EWSR1-217ENST00000483415 USP3Q9Y6I4 520 aa11.14□□□□□ -0.63
EWSR1-217ENST00000483415 ZNF638Q14966 1978 aaKnown RBP11.14□□□□□ -0.63
EWSR1-217ENST00000483415 hCG_2014768A0A024R1R8 64 aa11.14□□□□□ -0.63
EWSR1-217ENST00000483415 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.14□□□□□ -0.63
EWSR1-217ENST00000483415 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.14□□□□□ -0.63
EWSR1-217ENST00000483415 TP73O15350 636 aa11.14□□□□□ -0.63
EWSR1-217ENST00000483415 MAP3K7O43318 606 aa11.14□□□□□ -0.63
EWSR1-217ENST00000483415 E2F6O75461 281 aa11.14□□□□□ -0.63
EWSR1-217ENST00000483415 DCTN3O75935 186 aa11.14□□□□□ -0.63
EWSR1-217ENST00000483415 FGF19O95750 216 aa11.14□□□□□ -0.63
EWSR1-217ENST00000483415 CTNNA2P26232 953 aa11.14□□□□□ -0.63
EWSR1-217ENST00000483415 CD97P48960 835 aa11.14□□□□□ -0.63
EWSR1-217ENST00000483415 NDUFV1P49821 464 aa11.14□□□□□ -0.63
EWSR1-217ENST00000483415 LRRC38Q5VT99 294 aa11.14□□□□□ -0.63
EWSR1-217ENST00000483415 FAM35AQ86V20 835 aa11.14□□□□□ -0.63
EWSR1-217ENST00000483415 SLC15A3Q8IY34 581 aa11.14□□□□□ -0.63
EWSR1-217ENST00000483415 RIBC1Q8N443 379 aaPredicted RBP11.14□□□□□ -0.63
EWSR1-217ENST00000483415 SLC20A1Q8WUM9 679 aa11.14□□□□□ -0.63
EWSR1-217ENST00000483415 WDR60Q8WVS4 1066 aa11.14□□□□□ -0.63
EWSR1-217ENST00000483415 TRMT2BQ96GJ1 504 aaKnown RBP11.14□□□□□ -0.63
EWSR1-217ENST00000483415 TMEM169Q96HH4 297 aa11.14□□□□□ -0.63
EWSR1-217ENST00000483415 CDK5RAP1Q96SZ6 601 aaKnown RBP11.14□□□□□ -0.63
EWSR1-217ENST00000483415 B3GNT5Q9BYG0 378 aa11.14□□□□□ -0.63
EWSR1-217ENST00000483415 BRD8Q9H0E9 1235 aa11.14□□□□□ -0.63
EWSR1-217ENST00000483415 RETREG1Q9H6L5 497 aa11.14□□□□□ -0.63
EWSR1-217ENST00000483415 CRTAC1Q9NQ79 661 aa11.14□□□□□ -0.63
EWSR1-217ENST00000483415 RNASEH1O60930 286 aaKnown RBP11.13□□□□□ -0.63
EWSR1-217ENST00000483415 GALCP54803 685 aa11.13□□□□□ -0.63
EWSR1-217ENST00000483415 WDR4P57081 412 aaKnown RBP11.13□□□□□ -0.63
EWSR1-217ENST00000483415 RPL10AP62906 217 aaKnown RBP11.13□□□□□ -0.63
EWSR1-217ENST00000483415 ARID5AQ03989 594 aa11.13□□□□□ -0.63
EWSR1-217ENST00000483415 GOLGA7BQ2TAP0 167 aa11.13□□□□□ -0.63
EWSR1-217ENST00000483415 ELMSAN1Q6PJG2 1045 aa11.13□□□□□ -0.63
EWSR1-217ENST00000483415 SLC26A9Q7LBE3 791 aa11.13□□□□□ -0.63
EWSR1-217ENST00000483415 BNIPLQ7Z465 357 aa11.13□□□□□ -0.63
EWSR1-217ENST00000483415 PSTKQ8IV42 348 aaKnown RBP11.13□□□□□ -0.63
EWSR1-217ENST00000483415 TNS4Q8IZW8 715 aa11.13□□□□□ -0.63
EWSR1-217ENST00000483415 CYP4X1Q8N118 509 aa11.13□□□□□ -0.63
EWSR1-217ENST00000483415 RNF169Q8NCN4 708 aa11.13□□□□□ -0.63
EWSR1-217ENST00000483415 ZNF653Q96CK0 615 aa11.13□□□□□ -0.63
EWSR1-217ENST00000483415 PGAP3Q96FM1 320 aaPredicted RBP11.13□□□□□ -0.63
EWSR1-217ENST00000483415 SYNCQ9H7C4 482 aa11.13□□□□□ -0.63
EWSR1-217ENST00000483415 SPATA7Q9P0W8 599 aa11.13□□□□□ -0.63
EWSR1-217ENST00000483415 MIF4GDA9UHW6 222 aaKnown RBP11.13□□□□□ -0.63
EWSR1-217ENST00000483415 BRAFP15056 766 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms