RNA–Protein interactions for RNA: ENST00000483338.1

COL4A5-205, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 3,622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-205ENST00000483338 ZSWIM2Q8NEG5 633 aa8.03□□□□□ -1.12
COL4A5-205ENST00000483338 MZB1Q8WU39 189 aa8.03□□□□□ -1.12
COL4A5-205ENST00000483338 JPH3Q8WXH2 748 aaPredicted RBP8.03□□□□□ -1.12
COL4A5-205ENST00000483338 UROC1Q96N76 676 aa8.03□□□□□ -1.12
COL4A5-205ENST00000483338 TMEM246Q9BRR3 403 aa8.03□□□□□ -1.12
COL4A5-205ENST00000483338 TMEM121Q9BTD3 319 aa8.03□□□□□ -1.12
COL4A5-205ENST00000483338 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.03□□□□□ -1.12
COL4A5-205ENST00000483338 AKIP1Q9NQ31 210 aa8.03□□□□□ -1.12
COL4A5-205ENST00000483338 KCNQ5Q9NR82 932 aa8.03□□□□□ -1.12
COL4A5-205ENST00000483338 CNTN3Q9P232 1028 aa8.03□□□□□ -1.12
COL4A5-205ENST00000483338 NXF1Q9UBU9 619 aaKnown RBP8.03□□□□□ -1.12
COL4A5-205ENST00000483338 ENPP5Q9UJA9 477 aa8.03□□□□□ -1.12
COL4A5-205ENST00000483338 DNAJC12Q9UKB3 198 aa8.03□□□□□ -1.12
COL4A5-205ENST00000483338 CNOT11Q9UKZ1 510 aaKnown RBP8.03□□□□□ -1.12
COL4A5-205ENST00000483338 SCAF8Q9UPN6 1271 aaKnown RBP8.03□□□□□ -1.12
COL4A5-205ENST00000483338 EIF3LQ9Y262 564 aaKnown RBP8.03□□□□□ -1.12
COL4A5-205ENST00000483338 FAM205AQ6ZU69 1335 aa8.02□□□□□ -1.12
COL4A5-205ENST00000483338 RFPL2O75678 378 aa8.02□□□□□ -1.13
COL4A5-205ENST00000483338 MFN2O95140 757 aa8.02□□□□□ -1.13
COL4A5-205ENST00000483338 ATF4P18848 351 aaPredicted RBP8.02□□□□□ -1.13
COL4A5-205ENST00000483338 MATN1P21941 496 aa8.02□□□□□ -1.13
COL4A5-205ENST00000483338 RHAGQ02094 409 aa8.02□□□□□ -1.13
COL4A5-205ENST00000483338 EN1Q05925 392 aaPredicted RBP8.02□□□□□ -1.13
COL4A5-205ENST00000483338 TAF5Q15542 800 aa8.02□□□□□ -1.13
COL4A5-205ENST00000483338 TAF12Q16514 161 aa8.02□□□□□ -1.13
COL4A5-205ENST00000483338 C6orf10Q5SRN2 563 aa8.02□□□□□ -1.13
COL4A5-205ENST00000483338 RSBN1Q5VWQ0 802 aaPredicted RBP8.02□□□□□ -1.13
COL4A5-205ENST00000483338 IQSEC1Q6DN90 963 aa8.02□□□□□ -1.13
COL4A5-205ENST00000483338 SMIM5Q71RC9 77 aa8.02□□□□□ -1.13
COL4A5-205ENST00000483338 CATSPER3Q86XQ3 398 aa8.02□□□□□ -1.13
COL4A5-205ENST00000483338 TPH2Q8IWU9 490 aa8.02□□□□□ -1.13
COL4A5-205ENST00000483338 CDKL2Q92772 493 aa8.02□□□□□ -1.13
COL4A5-205ENST00000483338 CFAP36Q96G28 342 aa8.02□□□□□ -1.13
COL4A5-205ENST00000483338 ZNF560Q96MR9 790 aa8.02□□□□□ -1.13
COL4A5-205ENST00000483338 SNX18Q96RF0 628 aa8.02□□□□□ -1.13
COL4A5-205ENST00000483338 MCMBPQ9BTE3 642 aa8.02□□□□□ -1.13
COL4A5-205ENST00000483338 COQ10BQ9H8M1 238 aa8.02□□□□□ -1.13
COL4A5-205ENST00000483338 VPS37BQ9H9H4 285 aa8.02□□□□□ -1.13
COL4A5-205ENST00000483338 TIGARQ9NQ88 270 aa8.02□□□□□ -1.13
COL4A5-205ENST00000483338 TCF7L2Q9NQB0 619 aa8.02□□□□□ -1.13
COL4A5-205ENST00000483338 GGA3Q9NZ52 723 aa8.02□□□□□ -1.13
COL4A5-205ENST00000483338 SUCOQ9UBS9 1254 aaKnown RBP8.02□□□□□ -1.13
COL4A5-205ENST00000483338 ZNF229Q9UJW7 825 aa8.02□□□□□ -1.13
COL4A5-205ENST00000483338 MAFFQ9ULX9 164 aa8.02□□□□□ -1.13
COL4A5-205ENST00000483338 PRSS51A0A1B0GVH4 220 aa8.02□□□□□ -1.13
COL4A5-205ENST00000483338 A0A1W2PQ72 361 aa8.02□□□□□ -1.13
COL4A5-205ENST00000483338 TYW5A2RUC4 315 aaKnown RBP8.02□□□□□ -1.13
COL4A5-205ENST00000483338 C12orf71A8MTZ7 269 aa8.02□□□□□ -1.13
COL4A5-205ENST00000483338 TTKP33981 857 aa8.02□□□□□ -1.13
COL4A5-205ENST00000483338 PRKAA2P54646 552 aa8.02□□□□□ -1.13
COL4A5-205ENST00000483338 RAD23AP54725 363 aa8.02□□□□□ -1.13
COL4A5-205ENST00000483338 POLR2GP62487 172 aaKnown RBP eCLIP8.02□□□□□ -1.13
COL4A5-205ENST00000483338 MAPK11Q15759 364 aa8.02□□□□□ -1.13
COL4A5-205ENST00000483338 IZUMO3Q5VZ72 239 aa8.02□□□□□ -1.13
COL4A5-205ENST00000483338 TRIM63Q969Q1 353 aa8.02□□□□□ -1.13
COL4A5-205ENST00000483338 SH3KBP1Q96B97 665 aa8.02□□□□□ -1.13
COL4A5-205ENST00000483338 ZSCAN5AQ9BUG6 496 aa8.02□□□□□ -1.13
COL4A5-205ENST00000483338 POLR1BQ9H9Y6 1135 aa8.02□□□□□ -1.13
COL4A5-205ENST00000483338 EPB41L4AQ9HCS5 686 aaPredicted RBP8.02□□□□□ -1.13
COL4A5-205ENST00000483338 HMG20AQ9NP66 347 aa8.02□□□□□ -1.13
COL4A5-205ENST00000483338 CHST12Q9NRB3 414 aa8.02□□□□□ -1.13
COL4A5-205ENST00000483338 DCAF16Q9NXF7 216 aa8.02□□□□□ -1.13
COL4A5-205ENST00000483338 TMEM9Q9P0T7 183 aa8.02□□□□□ -1.13
COL4A5-205ENST00000483338 DNMT3LQ9UJW3 386 aa8.02□□□□□ -1.13
COL4A5-205ENST00000483338 ITGA11Q9UKX5 1188 aa8.02□□□□□ -1.13
COL4A5-205ENST00000483338 RGPD2P0DJD1 1756 aa8.02□□□□□ -1.13
COL4A5-205ENST00000483338 TNS2Q63HR2 1409 aa8.02□□□□□ -1.13
COL4A5-205ENST00000483338 PNMA6FA0A0J9YX94 578 aa8.02□□□□□ -1.13
COL4A5-205ENST00000483338 NDUFA2O43678 99 aa8.02□□□□□ -1.13
COL4A5-205ENST00000483338 ONECUT3O60422 494 aaPredicted RBP8.02□□□□□ -1.13
COL4A5-205ENST00000483338 RNGTTO60942 597 aaKnown RBP8.02□□□□□ -1.13
COL4A5-205ENST00000483338 GRIA1P42261 906 aa8.02□□□□□ -1.13
COL4A5-205ENST00000483338 CENPAP49450 140 aa8.02□□□□□ -1.13
COL4A5-205ENST00000483338 AP2S1P53680 142 aaPredicted RBP8.02□□□□□ -1.13
COL4A5-205ENST00000483338 RCAN1P53805 252 aa8.02□□□□□ -1.13
COL4A5-205ENST00000483338 MARSP56192 900 aaKnown RBP8.02□□□□□ -1.13
COL4A5-205ENST00000483338 GRSF1Q12849 480 aaKnown RBP eCLIP8.02□□□□□ -1.13
COL4A5-205ENST00000483338 SLC13A2Q13183 592 aa8.02□□□□□ -1.13
COL4A5-205ENST00000483338 IKBKEQ14164 716 aa8.02□□□□□ -1.13
COL4A5-205ENST00000483338 PPP1R3AQ16821 1122 aa8.02□□□□□ -1.13
COL4A5-205ENST00000483338 SDE2Q6IQ49 451 aa8.02□□□□□ -1.13
COL4A5-205ENST00000483338 C11orf63Q6NUN7 778 aa8.02□□□□□ -1.13
COL4A5-205ENST00000483338 PIWIL3Q7Z3Z3 882 aaKnown RBP8.02□□□□□ -1.13
COL4A5-205ENST00000483338 ARMC8Q8IUR7 673 aa8.02□□□□□ -1.13
COL4A5-205ENST00000483338 ZNF786Q8N393 782 aa8.02□□□□□ -1.13
COL4A5-205ENST00000483338 PAF1Q8N7H5 531 aa8.02□□□□□ -1.13
COL4A5-205ENST00000483338 SIMC1Q8NDZ2 872 aa8.02□□□□□ -1.13
COL4A5-205ENST00000483338 TFB1MQ8WVM0 346 aaKnown RBP8.02□□□□□ -1.13
COL4A5-205ENST00000483338 CD101Q93033 1021 aa8.02□□□□□ -1.13
COL4A5-205ENST00000483338 CCDC120Q96HB5 630 aa8.02□□□□□ -1.13
COL4A5-205ENST00000483338 DEPDC7Q96QD5 511 aa8.02□□□□□ -1.13
COL4A5-205ENST00000483338 C17orf62Q9BQA9 187 aa8.02□□□□□ -1.13
COL4A5-205ENST00000483338 ANKRD60Q9BZ19 345 aa8.02□□□□□ -1.13
COL4A5-205ENST00000483338 NYXQ9GZU5 481 aa8.02□□□□□ -1.13
COL4A5-205ENST00000483338 PLSCR3Q9NRY6 295 aa8.02□□□□□ -1.13
COL4A5-205ENST00000483338 COQ3Q9NZJ6 369 aa8.02□□□□□ -1.13
COL4A5-205ENST00000483338 CHORDC1Q9UHD1 332 aaPredicted RBP8.02□□□□□ -1.13
COL4A5-205ENST00000483338 SLC24A2Q9UI40 661 aa8.02□□□□□ -1.13
COL4A5-205ENST00000483338 VPS4AQ9UN37 437 aa8.02□□□□□ -1.13
COL4A5-205ENST00000483338 RIPK3Q9Y572 518 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms