RNA–Protein interactions for RNA: ENST00000481929.5

HDAC6-224, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-224ENST00000481929 A0A1W2PP55 124 aa15.59■□□□□ 0.09
HDAC6-224ENST00000481929 MID1O15344 667 aa15.59■□□□□ 0.09
HDAC6-224ENST00000481929 POLR2EP19388 210 aaKnown RBP15.59■□□□□ 0.09
HDAC6-224ENST00000481929 ZNF445P59923 1031 aa15.59■□□□□ 0.09
HDAC6-224ENST00000481929 CST6Q15828 149 aa15.59■□□□□ 0.09
HDAC6-224ENST00000481929 EPM2AIP1Q7L775 607 aaPredicted RBP15.59■□□□□ 0.09
HDAC6-224ENST00000481929 KIAA0907Q7Z7F0 614 aaPredicted RBP15.59■□□□□ 0.09
HDAC6-224ENST00000481929 NELFCDQ8IXH7 590 aa15.59■□□□□ 0.09
HDAC6-224ENST00000481929 ZC3H3Q8IXZ2 948 aaKnown RBP15.59■□□□□ 0.09
HDAC6-224ENST00000481929 ARHGAP18Q8N392 663 aa15.59■□□□□ 0.09
HDAC6-224ENST00000481929 DEPDC7Q96QD5 511 aa15.59■□□□□ 0.09
HDAC6-224ENST00000481929 NEUROG2Q9H2A3 272 aa15.59■□□□□ 0.09
HDAC6-224ENST00000481929 MTG2Q9H4K7 406 aa15.59■□□□□ 0.09
HDAC6-224ENST00000481929 THSD1Q9NS62 852 aa15.59■□□□□ 0.09
HDAC6-224ENST00000481929 IL17BQ9UHF5 180 aa15.59■□□□□ 0.09
HDAC6-224ENST00000481929 FZD4Q9ULV1 537 aa15.59■□□□□ 0.09
HDAC6-224ENST00000481929 TPX2Q9ULW0 747 aaKnown RBP15.59■□□□□ 0.09
HDAC6-224ENST00000481929 USP3Q9Y6I4 520 aa15.59■□□□□ 0.09
HDAC6-224ENST00000481929 UBE4BO95155 1302 aa15.59■□□□□ 0.09
HDAC6-224ENST00000481929 UBR5O95071 2799 aaPredicted RBP15.58■□□□□ 0.08
HDAC6-224ENST00000481929 LRRIQ3A6PVS8 624 aaPredicted RBP15.58■□□□□ 0.08
HDAC6-224ENST00000481929 EXOC3O60645 756 aa15.58■□□□□ 0.08
HDAC6-224ENST00000481929 USP12O75317 370 aa15.58■□□□□ 0.08
HDAC6-224ENST00000481929 VNN1O95497 513 aa15.58■□□□□ 0.08
HDAC6-224ENST00000481929 C4BPAP04003 597 aaKnown RBP15.58■□□□□ 0.08
HDAC6-224ENST00000481929 KRT10P13645 584 aa15.58■□□□□ 0.08
HDAC6-224ENST00000481929 LSSP48449 732 aa15.58■□□□□ 0.08
HDAC6-224ENST00000481929 HARS2P49590 506 aaKnown RBP15.58■□□□□ 0.08
HDAC6-224ENST00000481929 ST8SIA6P61647 398 aa15.58■□□□□ 0.08
HDAC6-224ENST00000481929 SGSM1Q2NKQ1 1148 aa15.58■□□□□ 0.08
HDAC6-224ENST00000481929 HS1BP3Q53T59 392 aa15.58■□□□□ 0.08
HDAC6-224ENST00000481929 PLEKHO2Q8TD55 490 aa15.58■□□□□ 0.08
HDAC6-224ENST00000481929 TMA16Q96EY4 203 aaKnown RBP15.58■□□□□ 0.08
HDAC6-224ENST00000481929 TRIM4Q9C037 500 aa15.58■□□□□ 0.08
HDAC6-224ENST00000481929 FAM117AQ9C073 453 aa15.58■□□□□ 0.08
HDAC6-224ENST00000481929 LRRC27Q9C0I9 530 aa15.58■□□□□ 0.08
HDAC6-224ENST00000481929 POLR1BQ9H9Y6 1135 aa15.58■□□□□ 0.08
HDAC6-224ENST00000481929 CLIC4Q9Y696 253 aa15.58■□□□□ 0.08
HDAC6-224ENST00000481929 A0A087X0B3 334 aa15.57■□□□□ 0.08
HDAC6-224ENST00000481929 K7ENP7 123 aa15.57■□□□□ 0.08
HDAC6-224ENST00000481929 SIGLEC6O43699 453 aa15.57■□□□□ 0.08
HDAC6-224ENST00000481929 MAGEC1O60732 1142 aa15.57■□□□□ 0.08
HDAC6-224ENST00000481929 SDC3O75056 442 aa15.57■□□□□ 0.08
HDAC6-224ENST00000481929 SIN3BO75182 1162 aa15.57■□□□□ 0.08
HDAC6-224ENST00000481929 NTRK1P04629 796 aa15.57■□□□□ 0.08
HDAC6-224ENST00000481929 ASPAP45381 313 aa15.57■□□□□ 0.08
HDAC6-224ENST00000481929 EHHADHQ08426 723 aa15.57■□□□□ 0.08
HDAC6-224ENST00000481929 ZNF211Q13398 564 aaPredicted RBP15.57■□□□□ 0.08
HDAC6-224ENST00000481929 TRIP4Q15650 581 aaPredicted RBP15.57■□□□□ 0.08
HDAC6-224ENST00000481929 FAM26FQ5R3K3 315 aa15.57■□□□□ 0.08
HDAC6-224ENST00000481929 CDCP2Q5VXM1 449 aa15.57■□□□□ 0.08
HDAC6-224ENST00000481929 KIAA1614Q5VZ46 1190 aa15.57■□□□□ 0.08
HDAC6-224ENST00000481929 NAPEPLDQ6IQ20 393 aa15.57■□□□□ 0.08
HDAC6-224ENST00000481929 INO80CQ6PI98 192 aaPredicted RBP15.57■□□□□ 0.08
HDAC6-224ENST00000481929 SPATS2Q86XZ4 545 aaKnown RBP15.57■□□□□ 0.08
HDAC6-224ENST00000481929 MFSD2AQ8NA29 543 aa15.57■□□□□ 0.08
HDAC6-224ENST00000481929 PARD3BQ8TEW8 1205 aa15.57■□□□□ 0.08
HDAC6-224ENST00000481929 TAF4BQ92750 862 aa15.57■□□□□ 0.08
HDAC6-224ENST00000481929 VCPIP1Q96JH7 1222 aa15.57■□□□□ 0.08
HDAC6-224ENST00000481929 TWNKQ96RR1 684 aa15.57■□□□□ 0.08
HDAC6-224ENST00000481929 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.57■□□□□ 0.08
HDAC6-224ENST00000481929 NT5C1AQ9BXI3 368 aa15.57■□□□□ 0.08
HDAC6-224ENST00000481929 DUSP16Q9BY84 665 aa15.57■□□□□ 0.08
HDAC6-224ENST00000481929 CGNQ9P2M7 1197 aaKnown RBP15.57■□□□□ 0.08
HDAC6-224ENST00000481929 SMC3Q9UQE7 1217 aa15.57■□□□□ 0.08
HDAC6-224ENST00000481929 TRIM38O00635 465 aa15.56■□□□□ 0.08
HDAC6-224ENST00000481929 OPA1O60313 960 aa15.56■□□□□ 0.08
HDAC6-224ENST00000481929 RPN1P04843 607 aaKnown RBP15.56■□□□□ 0.08
HDAC6-224ENST00000481929 YWHAGP61981 247 aaKnown RBP eCLIP15.56■□□□□ 0.08
HDAC6-224ENST00000481929 ASIC1P78348 528 aa15.56■□□□□ 0.08
HDAC6-224ENST00000481929 CLDN10P78369 228 aa15.56■□□□□ 0.08
HDAC6-224ENST00000481929 INCA1Q0VD86 236 aa15.56■□□□□ 0.08
HDAC6-224ENST00000481929 NFATC3Q12968 1075 aa15.56■□□□□ 0.08
HDAC6-224ENST00000481929 HNRNPA1L2Q32P51 320 aaKnown RBP15.56■□□□□ 0.08
HDAC6-224ENST00000481929 MMAAQ8IVH4 418 aaKnown RBP15.56■□□□□ 0.08
HDAC6-224ENST00000481929 C12orf56Q8IXR9 622 aa15.56■□□□□ 0.08
HDAC6-224ENST00000481929 PDILTQ8N807 584 aa15.56■□□□□ 0.08
HDAC6-224ENST00000481929 OR14C36Q8NHC7 312 aa15.56■□□□□ 0.08
HDAC6-224ENST00000481929 DNAI2Q9GZS0 605 aa15.56■□□□□ 0.08
HDAC6-224ENST00000481929 TNMDQ9H2S6 317 aa15.56■□□□□ 0.08
HDAC6-224ENST00000481929 ASCL3Q9NQ33 180 aa15.56■□□□□ 0.08
HDAC6-224ENST00000481929 DOPEY2Q9Y3R5 2298 aa15.56■□□□□ 0.08
HDAC6-224ENST00000481929 C10orf142B7Z368 130 aa15.55■□□□□ 0.08
HDAC6-224ENST00000481929 CSO75390 466 aaKnown RBP15.55■□□□□ 0.08
HDAC6-224ENST00000481929 ASS1P00966 412 aaKnown RBP15.55■□□□□ 0.08
HDAC6-224ENST00000481929 SLFN14P0C7P3 912 aa15.55■□□□□ 0.08
HDAC6-224ENST00000481929 SLC8A1P32418 973 aa15.55■□□□□ 0.08
HDAC6-224ENST00000481929 CD70P32970 193 aa15.55■□□□□ 0.08
HDAC6-224ENST00000481929 ADPRHP54922 357 aa15.55■□□□□ 0.08
HDAC6-224ENST00000481929 COLEC12Q5KU26 742 aa15.55■□□□□ 0.08
HDAC6-224ENST00000481929 ADGRF1Q5T601 910 aa15.55■□□□□ 0.08
HDAC6-224ENST00000481929 SPOPLQ6IQ16 392 aa15.55■□□□□ 0.08
HDAC6-224ENST00000481929 SND1Q7KZF4 910 aaKnown RBP eCLIP15.55■□□□□ 0.08
HDAC6-224ENST00000481929 IQCHQ86VS3 1027 aa15.55■□□□□ 0.08
HDAC6-224ENST00000481929 ZNF557Q8N988 423 aaPredicted RBP15.55■□□□□ 0.08
HDAC6-224ENST00000481929 WFDC5Q8TCV5 224 aa15.55■□□□□ 0.08
HDAC6-224ENST00000481929 TMX3Q96JJ7 454 aa15.55■□□□□ 0.08
HDAC6-224ENST00000481929 OLA1Q9NTK5 396 aaKnown RBP15.55■□□□□ 0.08
HDAC6-224ENST00000481929 TFIP11Q9UBB9 837 aaKnown RBP15.55■□□□□ 0.08
HDAC6-224ENST00000481929 STOML2Q9UJZ1 356 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms