RNA–Protein interactions for RNA: ENST00000481812.4

VPS16-207, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 943 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-207ENST00000481812 FBXL22Q6P050 247 aa21.41■■□□□ 1.02
VPS16-207ENST00000481812 RHBDF2Q6PJF5 856 aa21.41■■□□□ 1.02
VPS16-207ENST00000481812 DNASE1L2Q92874 299 aa21.41■■□□□ 1.02
VPS16-207ENST00000481812 TMA16Q96EY4 203 aaKnown RBP21.41■■□□□ 1.02
VPS16-207ENST00000481812 HES6Q96HZ4 224 aa21.41■■□□□ 1.02
VPS16-207ENST00000481812 EPAS1Q99814 870 aa21.41■■□□□ 1.02
VPS16-207ENST00000481812 DHX35Q9H5Z1 703 aaKnown RBP21.41■■□□□ 1.02
VPS16-207ENST00000481812 ECT2Q9H8V3 914 aa21.41■■□□□ 1.02
VPS16-207ENST00000481812 HPS4Q9NQG7 708 aa21.41■■□□□ 1.02
VPS16-207ENST00000481812 SLC2A4RGQ9NR83 387 aa21.41■■□□□ 1.02
VPS16-207ENST00000481812 RCOR3Q9P2K3 495 aaPredicted RBP21.41■■□□□ 1.02
VPS16-207ENST00000481812 E9PAM4 449 aa21.4■■□□□ 1.02
VPS16-207ENST00000481812 SCAMP3O14828 347 aaKnown RBP21.4■■□□□ 1.02
VPS16-207ENST00000481812 ADH1CP00326 375 aa21.4■■□□□ 1.02
VPS16-207ENST00000481812 CYBBP04839 570 aa21.4■■□□□ 1.02
VPS16-207ENST00000481812 ASGR2P07307 311 aa21.4■■□□□ 1.02
VPS16-207ENST00000481812 HOXC13P31276 330 aa21.4■■□□□ 1.02
VPS16-207ENST00000481812 DHCR24Q15392 516 aa21.4■■□□□ 1.02
VPS16-207ENST00000481812 CA9Q16790 459 aa21.4■■□□□ 1.02
VPS16-207ENST00000481812 SMTNL2Q2TAL5 461 aa21.4■■□□□ 1.02
VPS16-207ENST00000481812 ATP13A4Q4VNC1 1196 aa21.4■■□□□ 1.02
VPS16-207ENST00000481812 MEI1Q5TIA1 1274 aa21.4■■□□□ 1.02
VPS16-207ENST00000481812 C14orf80Q86SX3 495 aa21.4■■□□□ 1.02
VPS16-207ENST00000481812 MAP7D3Q8IWC1 876 aa21.4■■□□□ 1.02
VPS16-207ENST00000481812 PHF6Q8IWS0 365 aaKnown RBP eCLIP21.4■■□□□ 1.02
VPS16-207ENST00000481812 KATNAL2Q8IYT4 538 aa21.4■■□□□ 1.02
VPS16-207ENST00000481812 LGI2Q8N0V4 545 aa21.4■■□□□ 1.02
VPS16-207ENST00000481812 CPA6Q8N4T0 437 aa21.4■■□□□ 1.02
VPS16-207ENST00000481812 HJURPQ8NCD3 748 aaPredicted RBP21.4■■□□□ 1.02
VPS16-207ENST00000481812 ZFYVE19Q96K21 471 aa21.4■■□□□ 1.02
VPS16-207ENST00000481812 KCTD15Q96SI1 283 aaPredicted RBP21.4■■□□□ 1.02
VPS16-207ENST00000481812 STAU2Q9NUL3 570 aaKnown RBP eCLIP21.4■■□□□ 1.02
VPS16-207ENST00000481812 GPATCH2LQ9NWQ4 482 aa21.4■■□□□ 1.02
VPS16-207ENST00000481812 VANGL2Q9ULK5 521 aa21.4■■□□□ 1.02
VPS16-207ENST00000481812 SORCS3Q9UPU3 1222 aa21.4■■□□□ 1.02
VPS16-207ENST00000481812 TICRRQ7Z2Z1 1910 aa21.39■■□□□ 1.02
VPS16-207ENST00000481812 COL4A2P08572 1712 aa21.39■■□□□ 1.01
VPS16-207ENST00000481812 TYW5A2RUC4 315 aaKnown RBP21.39■■□□□ 1.01
VPS16-207ENST00000481812 FAM72CH0Y354 149 aa21.39■■□□□ 1.01
VPS16-207ENST00000481812 HOXC11O43248 304 aaPredicted RBP21.39■■□□□ 1.01
VPS16-207ENST00000481812 LRIG2O94898 1065 aa21.39■■□□□ 1.01
VPS16-207ENST00000481812 FTCDO95954 541 aa21.39■■□□□ 1.01
VPS16-207ENST00000481812 PENKP01210 267 aaPredicted RBP21.39■■□□□ 1.01
VPS16-207ENST00000481812 CYP17A1P05093 508 aa21.39■■□□□ 1.01
VPS16-207ENST00000481812 SRFP11831 508 aa21.39■■□□□ 1.01
VPS16-207ENST00000481812 ARSAP15289 507 aa21.39■■□□□ 1.01
VPS16-207ENST00000481812 PEX5P50542 639 aa21.39■■□□□ 1.01
VPS16-207ENST00000481812 PFKPQ01813 784 aa21.39■■□□□ 1.01
VPS16-207ENST00000481812 GAD2Q05329 585 aa21.39■■□□□ 1.01
VPS16-207ENST00000481812 LY6G5CQ5SRR4 150 aa21.39■■□□□ 1.01
VPS16-207ENST00000481812 FAM72AQ5TYM5 149 aa21.39■■□□□ 1.01
VPS16-207ENST00000481812 TRIM68Q6AZZ1 485 aa21.39■■□□□ 1.01
VPS16-207ENST00000481812 FAM72DQ6L9T8 149 aa21.39■■□□□ 1.01
VPS16-207ENST00000481812 RFWD3Q6PCD5 774 aa21.39■■□□□ 1.01
VPS16-207ENST00000481812 FAM72BQ86X60 149 aa21.39■■□□□ 1.01
VPS16-207ENST00000481812 TMEM25Q86YD3 366 aa21.39■■□□□ 1.01
VPS16-207ENST00000481812 PYROXD2Q8N2H3 581 aa21.39■■□□□ 1.01
VPS16-207ENST00000481812 UBL4BQ8N7F7 174 aa21.39■■□□□ 1.01
VPS16-207ENST00000481812 HSPH1Q92598 858 aa21.39■■□□□ 1.01
VPS16-207ENST00000481812 MAGEB5Q9BZ81 275 aa21.39■■□□□ 1.01
VPS16-207ENST00000481812 EBF3Q9H4W6 596 aa21.39■■□□□ 1.01
VPS16-207ENST00000481812 PCDH18Q9HCL0 1135 aa21.39■■□□□ 1.01
VPS16-207ENST00000481812 JRKLQ9Y4A0 524 aa21.39■■□□□ 1.01
VPS16-207ENST00000481812 UNC80Q8N2C7 3258 aa21.39■■□□□ 1.01
VPS16-207ENST00000481812 KDELR1P24390 212 aa21.38■■□□□ 1.01
VPS16-207ENST00000481812 ARL4AP40617 200 aa21.38■■□□□ 1.01
VPS16-207ENST00000481812 CDH6P55285 790 aa21.38■■□□□ 1.01
VPS16-207ENST00000481812 ITPRIPL2Q3MIP1 535 aa21.38■■□□□ 1.01
VPS16-207ENST00000481812 ZNF569Q5MCW4 686 aa21.38■■□□□ 1.01
VPS16-207ENST00000481812 FYB2Q5VWT5 728 aa21.38■■□□□ 1.01
VPS16-207ENST00000481812 CHST9Q7L1S5 443 aa21.38■■□□□ 1.01
VPS16-207ENST00000481812 ZNF557Q8N988 423 aaPredicted RBP21.38■■□□□ 1.01
VPS16-207ENST00000481812 KCTD6Q8NC69 237 aa21.38■■□□□ 1.01
VPS16-207ENST00000481812 EXD1Q8NHP7 514 aa21.38■■□□□ 1.01
VPS16-207ENST00000481812 CSGALNACT1Q8TDX6 532 aa21.38■■□□□ 1.01
VPS16-207ENST00000481812 TSC1Q92574 1164 aa21.38■■□□□ 1.01
VPS16-207ENST00000481812 TBC1D31Q96DN5 1066 aa21.38■■□□□ 1.01
VPS16-207ENST00000481812 PRICKLE1Q96MT3 831 aaPredicted RBP21.38■■□□□ 1.01
VPS16-207ENST00000481812 RPRD1AQ96P16 312 aaPredicted RBP21.38■■□□□ 1.01
VPS16-207ENST00000481812 ZYG11BQ9C0D3 744 aa21.38■■□□□ 1.01
VPS16-207ENST00000481812 DONSONQ9NYP3 566 aa21.38■■□□□ 1.01
VPS16-207ENST00000481812 DUSP12Q9UNI6 340 aa21.38■■□□□ 1.01
VPS16-207ENST00000481812 SNX10Q9Y5X0 201 aa21.38■■□□□ 1.01
VPS16-207ENST00000481812 A0A1B0GVM2 712 aa21.37■■□□□ 1.01
VPS16-207ENST00000481812 TCAF2A6NFQ2 919 aa21.37■■□□□ 1.01
VPS16-207ENST00000481812 H3BRJ5 948 aa21.37■■□□□ 1.01
VPS16-207ENST00000481812 TRDMT1O14717 391 aaKnown RBP21.37■■□□□ 1.01
VPS16-207ENST00000481812 DDX3YO15523 660 aaKnown RBP21.37■■□□□ 1.01
VPS16-207ENST00000481812 TSPAN3O60637 253 aa21.37■■□□□ 1.01
VPS16-207ENST00000481812 SRGAP2O75044 1071 aa21.37■■□□□ 1.01
VPS16-207ENST00000481812 ZRANB2O95218 330 aaKnown RBP eCLIP21.37■■□□□ 1.01
VPS16-207ENST00000481812 ADH5P11766 374 aa21.37■■□□□ 1.01
VPS16-207ENST00000481812 GLULP15104 373 aa21.37■■□□□ 1.01
VPS16-207ENST00000481812 GJC1P36383 396 aa21.37■■□□□ 1.01
VPS16-207ENST00000481812 GGCXP38435 758 aa21.37■■□□□ 1.01
VPS16-207ENST00000481812 CDH4P55283 916 aa21.37■■□□□ 1.01
VPS16-207ENST00000481812 RWDD2BP57060 319 aa21.37■■□□□ 1.01
VPS16-207ENST00000481812 TNK2Q07912 1038 aa21.37■■□□□ 1.01
VPS16-207ENST00000481812 KRT81Q14533 505 aa21.37■■□□□ 1.01
VPS16-207ENST00000481812 TPGS1Q6ZTW0 290 aa21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms