RNA–Protein interactions for RNA: ENST00000481754.1

GPN1-208, Transcript of GPN-loop GTPase 1, human

TSL 4

Gene GPN1, Length 537 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GPN1-208	ENST00000481754	KDELR1	P24390	212 aa		10.84	□□□□□ -0.67
GPN1-208	ENST00000481754	EPHB2	P29323	1055 aa		10.84	□□□□□ -0.67
GPN1-208	ENST00000481754	CASQ1	P31415	396 aa		10.84	□□□□□ -0.67
GPN1-208	ENST00000481754	OXCT1	P55809	520 aa		10.84	□□□□□ -0.67
GPN1-208	ENST00000481754	COPS2	P61201	443 aa		10.84	□□□□□ -0.67
GPN1-208	ENST00000481754	PFKP	Q01813	784 aa		10.84	□□□□□ -0.67
GPN1-208	ENST00000481754	GAD2	Q05329	585 aa		10.84	□□□□□ -0.67
GPN1-208	ENST00000481754	GRM2	Q14416	872 aa		10.84	□□□□□ -0.67
GPN1-208	ENST00000481754	ANO4	Q32M45	955 aa		10.84	□□□□□ -0.67
GPN1-208	ENST00000481754	ATP13A4	Q4VNC1	1196 aa		10.84	□□□□□ -0.67
GPN1-208	ENST00000481754	MPP7	Q5T2T1	576 aa		10.84	□□□□□ -0.67
GPN1-208	ENST00000481754	PIK3R6	Q5UE93	754 aa		10.84	□□□□□ -0.67
GPN1-208	ENST00000481754	TXNRD3NB	Q6F5E7	133 aa		10.84	□□□□□ -0.67
GPN1-208	ENST00000481754	NADSYN1	Q6IA69	706 aa		10.84	□□□□□ -0.67
GPN1-208	ENST00000481754	FBXL22	Q6P050	247 aa		10.84	□□□□□ -0.67
GPN1-208	ENST00000481754	RFWD3	Q6PCD5	774 aa		10.84	□□□□□ -0.67
GPN1-208	ENST00000481754	TPGS1	Q6ZTW0	290 aa		10.84	□□□□□ -0.67
GPN1-208	ENST00000481754	VSIG1	Q86XK7	387 aa		10.84	□□□□□ -0.67
GPN1-208	ENST00000481754	CPNE8	Q86YQ8	564 aa		10.84	□□□□□ -0.67
GPN1-208	ENST00000481754	HJURP	Q8NCD3	748 aa	Predicted RBP	10.84	□□□□□ -0.67
GPN1-208	ENST00000481754	ST13P5	Q8NFI4	369 aa	Predicted RBP	10.84	□□□□□ -0.67
GPN1-208	ENST00000481754	TRAF3IP1	Q8TDR0	691 aa	Predicted RBP	10.84	□□□□□ -0.67
GPN1-208	ENST00000481754	CD101	Q93033	1021 aa		10.84	□□□□□ -0.67
GPN1-208	ENST00000481754	WBP2	Q969T9	261 aa		10.84	□□□□□ -0.67
GPN1-208	ENST00000481754	EXOC4	Q96A65	974 aa		10.84	□□□□□ -0.67
GPN1-208	ENST00000481754	RNF25	Q96BH1	459 aa	Predicted RBP	10.84	□□□□□ -0.67
GPN1-208	ENST00000481754	LRRC3B	Q96PB8	259 aa		10.84	□□□□□ -0.67
GPN1-208	ENST00000481754	NAPG	Q99747	312 aa	Predicted RBP	10.84	□□□□□ -0.67
GPN1-208	ENST00000481754	PRMT1	Q99873	361 aa	Known RBP	10.84	□□□□□ -0.67
GPN1-208	ENST00000481754	FAM83C	Q9BQN1	747 aa		10.84	□□□□□ -0.67
GPN1-208	ENST00000481754	ZYG11B	Q9C0D3	744 aa		10.84	□□□□□ -0.67
GPN1-208	ENST00000481754	LINC00597	Q9H2U6	94 aa		10.84	□□□□□ -0.67
GPN1-208	ENST00000481754	ANLN	Q9NQW6	1124 aa		10.84	□□□□□ -0.67
GPN1-208	ENST00000481754	SPHK2	Q9NRA0	654 aa		10.84	□□□□□ -0.67
GPN1-208	ENST00000481754	TMPRSS4	Q9NRS4	437 aa		10.84	□□□□□ -0.67
GPN1-208	ENST00000481754	GPATCH2L	Q9NWQ4	482 aa		10.84	□□□□□ -0.67
GPN1-208	ENST00000481754	GREB1	Q4ZG55	1949 aa		10.84	□□□□□ -0.67
GPN1-208	ENST00000481754	ZNF559-ZNF177	A0A0A6YYI6	481 aa	Predicted RBP	10.83	□□□□□ -0.68
GPN1-208	ENST00000481754	DRGX	A6NNA5	263 aa		10.83	□□□□□ -0.68
GPN1-208	ENST00000481754	ZNF487	B1APH4	448 aa		10.83	□□□□□ -0.68
GPN1-208	ENST00000481754	KCNK3	O14649	394 aa		10.83	□□□□□ -0.68
GPN1-208	ENST00000481754	ENC1	O14682	589 aa		10.83	□□□□□ -0.68
GPN1-208	ENST00000481754	TRDMT1	O14717	391 aa	Known RBP	10.83	□□□□□ -0.68
GPN1-208	ENST00000481754	TSPAN3	O60637	253 aa		10.83	□□□□□ -0.68
GPN1-208	ENST00000481754	CLDN11	O75508	207 aa		10.83	□□□□□ -0.68
GPN1-208	ENST00000481754	LRIG2	O94898	1065 aa		10.83	□□□□□ -0.68
GPN1-208	ENST00000481754	ZFX	P17010	805 aa	Predicted RBP	10.83	□□□□□ -0.68
GPN1-208	ENST00000481754	RHOQ	P17081	205 aa		10.83	□□□□□ -0.68
GPN1-208	ENST00000481754	PEX5	P50542	639 aa		10.83	□□□□□ -0.68
GPN1-208	ENST00000481754	ZNF177	Q13360	481 aa	Predicted RBP	10.83	□□□□□ -0.68
GPN1-208	ENST00000481754	TDG	Q13569	410 aa		10.83	□□□□□ -0.68
GPN1-208	ENST00000481754	RUNX3	Q13761	415 aa		10.83	□□□□□ -0.68
GPN1-208	ENST00000481754	TFDP2	Q14188	446 aa		10.83	□□□□□ -0.68
GPN1-208	ENST00000481754	DHCR24	Q15392	516 aa		10.83	□□□□□ -0.68
GPN1-208	ENST00000481754	CA9	Q16790	459 aa		10.83	□□□□□ -0.68
GPN1-208	ENST00000481754	EML3	Q32P44	896 aa		10.83	□□□□□ -0.68
GPN1-208	ENST00000481754	PREPL	Q4J6C6	727 aa	Predicted RBP	10.83	□□□□□ -0.68
GPN1-208	ENST00000481754	FAM133B	Q5BKY9	247 aa	Known RBP	10.83	□□□□□ -0.68
GPN1-208	ENST00000481754	SEL1L2	Q5TEA6	688 aa		10.83	□□□□□ -0.68
GPN1-208	ENST00000481754	RFX8	Q6ZV50	586 aa		10.83	□□□□□ -0.68
GPN1-208	ENST00000481754	CYP4V2	Q6ZWL3	525 aa	Predicted RBP	10.83	□□□□□ -0.68
GPN1-208	ENST00000481754	FAM217A	Q8IXS0	508 aa		10.83	□□□□□ -0.68
GPN1-208	ENST00000481754	PYROXD2	Q8N2H3	581 aa		10.83	□□□□□ -0.68
GPN1-208	ENST00000481754	SLC44A3	Q8N4M1	653 aa		10.83	□□□□□ -0.68
GPN1-208	ENST00000481754	RAPGEF5	Q92565	580 aa		10.83	□□□□□ -0.68
GPN1-208	ENST00000481754	KRT35	Q92764	455 aa		10.83	□□□□□ -0.68
GPN1-208	ENST00000481754	ZFYVE19	Q96K21	471 aa		10.83	□□□□□ -0.68
GPN1-208	ENST00000481754	C16orf45	Q96MC5	204 aa	Predicted RBP	10.83	□□□□□ -0.68
GPN1-208	ENST00000481754	XPO6	Q96QU8	1125 aa	Known RBP	10.83	□□□□□ -0.68
GPN1-208	ENST00000481754	KCTD15	Q96SI1	283 aa	Predicted RBP	10.83	□□□□□ -0.68
GPN1-208	ENST00000481754	ZNF670	Q9BS34	389 aa		10.83	□□□□□ -0.68
GPN1-208	ENST00000481754	RPP25	Q9BUL9	199 aa	Known RBP	10.83	□□□□□ -0.68
GPN1-208	ENST00000481754	BBS2	Q9BXC9	721 aa		10.83	□□□□□ -0.68
GPN1-208	ENST00000481754	PLA2G2F	Q9BZM2	168 aa		10.83	□□□□□ -0.68
GPN1-208	ENST00000481754	EBF3	Q9H4W6	596 aa		10.83	□□□□□ -0.68
GPN1-208	ENST00000481754	PCDH18	Q9HCL0	1135 aa		10.83	□□□□□ -0.68
GPN1-208	ENST00000481754	KLHL11	Q9NVR0	708 aa		10.83	□□□□□ -0.68
GPN1-208	ENST00000481754	DNAI1	Q9UI46	699 aa		10.83	□□□□□ -0.68
GPN1-208	ENST00000481754	PACSIN2	Q9UNF0	486 aa	Predicted RBP	10.83	□□□□□ -0.68
GPN1-208	ENST00000481754	SNX10	Q9Y5X0	201 aa		10.83	□□□□□ -0.68
GPN1-208	ENST00000481754	REV3L	O60673	3130 aa		10.82	□□□□□ -0.68
GPN1-208	ENST00000481754	PI4K2B	G5E9Z4	385 aa		10.82	□□□□□ -0.68
GPN1-208	ENST00000481754	FAM72C	H0Y354	149 aa		10.82	□□□□□ -0.68
GPN1-208	ENST00000481754		H0Y626	953 aa		10.82	□□□□□ -0.68
GPN1-208	ENST00000481754		I6L893	689 aa	Predicted RBP	10.82	□□□□□ -0.68
GPN1-208	ENST00000481754	DDX3Y	O15523	660 aa	Known RBP	10.82	□□□□□ -0.68
GPN1-208	ENST00000481754	TBL1X	O60907	577 aa		10.82	□□□□□ -0.68
GPN1-208	ENST00000481754	TJP3	O95049	919 aa		10.82	□□□□□ -0.68
GPN1-208	ENST00000481754	ADH5	P11766	374 aa		10.82	□□□□□ -0.68
GPN1-208	ENST00000481754	BMP1	P13497	986 aa		10.82	□□□□□ -0.68
GPN1-208	ENST00000481754	GOT1	P17174	413 aa		10.82	□□□□□ -0.68
GPN1-208	ENST00000481754	TCP1	P17987	556 aa	Known RBP	10.82	□□□□□ -0.68
GPN1-208	ENST00000481754	SLC6A4	P31645	630 aa		10.82	□□□□□ -0.68
GPN1-208	ENST00000481754	GGCX	P38435	758 aa		10.82	□□□□□ -0.68
GPN1-208	ENST00000481754	VCP	P55072	806 aa	Known RBP	10.82	□□□□□ -0.68
GPN1-208	ENST00000481754	CDH4	P55283	916 aa		10.82	□□□□□ -0.68
GPN1-208	ENST00000481754	ZP2	Q05996	745 aa		10.82	□□□□□ -0.68
GPN1-208	ENST00000481754	CDH18	Q13634	790 aa		10.82	□□□□□ -0.68
GPN1-208	ENST00000481754	DPYSL3	Q14195	570 aa		10.82	□□□□□ -0.68
GPN1-208	ENST00000481754	ITPRIPL2	Q3MIP1	535 aa		10.82	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms