RNA–Protein interactions for RNA: ENST00000480219.1

SCAMP3-207, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 2

Gene SCAMP3, Length 752 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-207ENST00000480219 SH3RF2Q8TEC5 729 aa17.4■□□□□ 0.38
SCAMP3-207ENST00000480219 ASB16Q96NS5 453 aa17.4■□□□□ 0.38
SCAMP3-207ENST00000480219 CALN1Q9BXU9 219 aa17.4■□□□□ 0.38
SCAMP3-207ENST00000480219 ARHGEF4Q9NR80 690 aa17.4■□□□□ 0.38
SCAMP3-207ENST00000480219 SMPD4Q9NXE4 827 aa17.4■□□□□ 0.38
SCAMP3-207ENST00000480219 CD207Q9UJ71 328 aa17.4■□□□□ 0.38
SCAMP3-207ENST00000480219 CDH22Q9UJ99 828 aa17.4■□□□□ 0.38
SCAMP3-207ENST00000480219 LSM7Q9UK45 103 aaKnown RBP17.4■□□□□ 0.38
SCAMP3-207ENST00000480219 CDH7Q9ULB5 785 aa17.4■□□□□ 0.38
SCAMP3-207ENST00000480219 E9PAM4 449 aa17.39■□□□□ 0.37
SCAMP3-207ENST00000480219 EEF2KO00418 725 aaKnown RBP17.39■□□□□ 0.37
SCAMP3-207ENST00000480219 DCLK1O15075 740 aa17.39■□□□□ 0.37
SCAMP3-207ENST00000480219 FGF10O15520 208 aaPredicted RBP17.39■□□□□ 0.37
SCAMP3-207ENST00000480219 TJP3O95049 919 aa17.39■□□□□ 0.37
SCAMP3-207ENST00000480219 MOCS2O96007 188 aaPredicted RBP17.39■□□□□ 0.37
SCAMP3-207ENST00000480219 KRT10P13645 584 aa17.39■□□□□ 0.37
SCAMP3-207ENST00000480219 ZFXP17010 805 aaPredicted RBP17.39■□□□□ 0.37
SCAMP3-207ENST00000480219 TACR2P21452 398 aa17.39■□□□□ 0.37
SCAMP3-207ENST00000480219 PAFAH1B1P43034 410 aa17.39■□□□□ 0.37
SCAMP3-207ENST00000480219 CYP1B1Q16678 543 aa17.39■□□□□ 0.37
SCAMP3-207ENST00000480219 PPP6R3Q5H9R7 873 aaPredicted RBP17.39■□□□□ 0.37
SCAMP3-207ENST00000480219 ZFYVE27Q5T4F4 411 aa17.39■□□□□ 0.37
SCAMP3-207ENST00000480219 RNF43Q68DV7 783 aa17.39■□□□□ 0.37
SCAMP3-207ENST00000480219 Q7L0L9 218 aa17.39■□□□□ 0.37
SCAMP3-207ENST00000480219 C14orf80Q86SX3 495 aa17.39■□□□□ 0.37
SCAMP3-207ENST00000480219 CCDC50Q8IVM0 306 aa17.39■□□□□ 0.37
SCAMP3-207ENST00000480219 RIN3Q8TB24 985 aa17.39■□□□□ 0.37
SCAMP3-207ENST00000480219 ZSCAN18Q8TBC5 510 aaPredicted RBP17.39■□□□□ 0.37
SCAMP3-207ENST00000480219 ING5Q8WYH8 240 aa17.39■□□□□ 0.37
SCAMP3-207ENST00000480219 SMARCD2Q92925 531 aa17.39■□□□□ 0.37
SCAMP3-207ENST00000480219 TBC1D31Q96DN5 1066 aa17.39■□□□□ 0.37
SCAMP3-207ENST00000480219 DDX50Q9BQ39 737 aaKnown RBP17.39■□□□□ 0.37
SCAMP3-207ENST00000480219 APOL5Q9BWW9 433 aa17.39■□□□□ 0.37
SCAMP3-207ENST00000480219 ZNF212Q9UDV6 495 aa17.39■□□□□ 0.37
SCAMP3-207ENST00000480219 CCL26Q9Y258 94 aa17.39■□□□□ 0.37
SCAMP3-207ENST00000480219 SNX10Q9Y5X0 201 aa17.39■□□□□ 0.37
SCAMP3-207ENST00000480219 KIF26AQ9ULI4 1882 aaPredicted RBP17.39■□□□□ 0.37
SCAMP3-207ENST00000480219 SPTBN5Q9NRC6 3674 aaKnown RBP17.39■□□□□ 0.37
SCAMP3-207ENST00000480219 FCARP24071 287 aa17.38■□□□□ 0.37
SCAMP3-207ENST00000480219 TPI1P60174 286 aa17.38■□□□□ 0.37
SCAMP3-207ENST00000480219 CBX2Q14781 532 aaPredicted RBP17.38■□□□□ 0.37
SCAMP3-207ENST00000480219 PAFAH1B3Q15102 231 aaKnown RBP17.38■□□□□ 0.37
SCAMP3-207ENST00000480219 LONRF2Q1L5Z9 754 aa17.38■□□□□ 0.37
SCAMP3-207ENST00000480219 FBXL22Q6P050 247 aa17.38■□□□□ 0.37
SCAMP3-207ENST00000480219 NLRP14Q86W24 1093 aa17.38■□□□□ 0.37
SCAMP3-207ENST00000480219 DENND1CQ8IV53 801 aa17.38■□□□□ 0.37
SCAMP3-207ENST00000480219 DEFB123Q8N688 67 aa17.38■□□□□ 0.37
SCAMP3-207ENST00000480219 CELF5Q8N6W0 485 aaKnown RBP17.38■□□□□ 0.37
SCAMP3-207ENST00000480219 PLD5Q8N7P1 536 aa17.38■□□□□ 0.37
SCAMP3-207ENST00000480219 C12orf50Q8NA57 414 aaPredicted RBP17.38■□□□□ 0.37
SCAMP3-207ENST00000480219 OTUB2Q96DC9 234 aa17.38■□□□□ 0.37
SCAMP3-207ENST00000480219 RPGRIP1Q96KN7 1286 aa17.38■□□□□ 0.37
SCAMP3-207ENST00000480219 CAPZA3Q96KX2 299 aa17.38■□□□□ 0.37
SCAMP3-207ENST00000480219 FRMD8P1Q9BZ68 369 aaPredicted RBP17.38■□□□□ 0.37
SCAMP3-207ENST00000480219 SIK2Q9H0K1 926 aa17.38■□□□□ 0.37
SCAMP3-207ENST00000480219 SLITRK6Q9H5Y7 841 aa17.38■□□□□ 0.37
SCAMP3-207ENST00000480219 UBE2ZQ9H832 354 aaPredicted RBP17.38■□□□□ 0.37
SCAMP3-207ENST00000480219 CFAP97Q9P2B7 532 aa17.38■□□□□ 0.37
SCAMP3-207ENST00000480219 SH3BP1Q9Y3L3 701 aa17.38■□□□□ 0.37
SCAMP3-207ENST00000480219 TCRBV7S2A1N4TA0A589 114 aa17.37■□□□□ 0.37
SCAMP3-207ENST00000480219 APOC4-APOC2K7ER74 178 aa17.37■□□□□ 0.37
SCAMP3-207ENST00000480219 CREB3O43889 395 aa17.37■□□□□ 0.37
SCAMP3-207ENST00000480219 CST8O60676 142 aa17.37■□□□□ 0.37
SCAMP3-207ENST00000480219 APOC2P02655 101 aa17.37■□□□□ 0.37
SCAMP3-207ENST00000480219 IRF1P10914 325 aa17.37■□□□□ 0.37
SCAMP3-207ENST00000480219 FOSL2P15408 326 aa17.37■□□□□ 0.37
SCAMP3-207ENST00000480219 RHOQP17081 205 aa17.37■□□□□ 0.37
SCAMP3-207ENST00000480219 ERCC2P18074 760 aa17.37■□□□□ 0.37
SCAMP3-207ENST00000480219 TGM2P21980 687 aa17.37■□□□□ 0.37
SCAMP3-207ENST00000480219 SLC6A4P31645 630 aa17.37■□□□□ 0.37
SCAMP3-207ENST00000480219 FAM78AQ5JUQ0 283 aa17.37■□□□□ 0.37
SCAMP3-207ENST00000480219 CCDC181Q5TID7 509 aa17.37■□□□□ 0.37
SCAMP3-207ENST00000480219 TTC39BQ5VTQ0 682 aaPredicted RBP17.37■□□□□ 0.37
SCAMP3-207ENST00000480219 RAP1GAP2Q684P5 730 aa17.37■□□□□ 0.37
SCAMP3-207ENST00000480219 NCBP2-AS2Q69YL0 99 aa17.37■□□□□ 0.37
SCAMP3-207ENST00000480219 LRRC31Q6UY01 552 aa17.37■□□□□ 0.37
SCAMP3-207ENST00000480219 GET4Q7L5D6 327 aaPredicted RBP17.37■□□□□ 0.37
SCAMP3-207ENST00000480219 CHSY1Q86X52 802 aa17.37■□□□□ 0.37
SCAMP3-207ENST00000480219 CEP112Q8N8E3 955 aa17.37■□□□□ 0.37
SCAMP3-207ENST00000480219 E2F7Q96AV8 911 aa17.37■□□□□ 0.37
SCAMP3-207ENST00000480219 MYADMQ96S97 322 aa17.37■□□□□ 0.37
SCAMP3-207ENST00000480219 HEMGNQ9BXL5 484 aa17.37■□□□□ 0.37
SCAMP3-207ENST00000480219 SMG9Q9H0W8 520 aaKnown RBP17.37■□□□□ 0.37
SCAMP3-207ENST00000480219 POMKQ9H5K3 350 aa17.37■□□□□ 0.37
SCAMP3-207ENST00000480219 TMEM248Q9NWD8 314 aa17.37■□□□□ 0.37
SCAMP3-207ENST00000480219 SMARCAL1Q9NZC9 954 aa17.37■□□□□ 0.37
SCAMP3-207ENST00000480219 RAD54BQ9Y620 910 aa17.37■□□□□ 0.37
SCAMP3-207ENST00000480219 DOCK8Q8NF50 2099 aa17.36■□□□□ 0.37
SCAMP3-207ENST00000480219 F5H5T6 163 aa17.36■□□□□ 0.37
SCAMP3-207ENST00000480219 CCDC188H7C350 402 aa17.36■□□□□ 0.37
SCAMP3-207ENST00000480219 APOL1O14791 398 aa17.36■□□□□ 0.37
SCAMP3-207ENST00000480219 AMPD1P23109 780 aa17.36■□□□□ 0.37
SCAMP3-207ENST00000480219 EPHB2P29323 1055 aa17.36■□□□□ 0.37
SCAMP3-207ENST00000480219 CHKAP35790 457 aa17.36■□□□□ 0.37
SCAMP3-207ENST00000480219 GGCXP38435 758 aa17.36■□□□□ 0.37
SCAMP3-207ENST00000480219 NR2C2P49116 596 aa17.36■□□□□ 0.37
SCAMP3-207ENST00000480219 SMAD4Q13485 552 aaKnown RBP17.36■□□□□ 0.37
SCAMP3-207ENST00000480219 MPP7Q5T2T1 576 aa17.36■□□□□ 0.37
SCAMP3-207ENST00000480219 DRICH1Q6PGQ1 229 aaPredicted RBP17.36■□□□□ 0.37
SCAMP3-207ENST00000480219 RFX6Q8HWS3 928 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms