RNA–Protein interactions for RNA: ENST00000479542.1

ABCF1-206, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 2

Gene ABCF1, Length 893 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-206ENST00000479542 LCLAT1Q6UWP7 414 aa13.85□□□□□ -0.19
ABCF1-206ENST00000479542 SCUBE3Q8IX30 993 aa13.85□□□□□ -0.19
ABCF1-206ENST00000479542 UBR7Q8N806 425 aa13.85□□□□□ -0.19
ABCF1-206ENST00000479542 FIBINQ8TAL6 211 aa13.85□□□□□ -0.19
ABCF1-206ENST00000479542 SLC35F5Q8WV83 523 aa13.85□□□□□ -0.19
ABCF1-206ENST00000479542 SORCS1Q8WY21 1168 aa13.85□□□□□ -0.19
ABCF1-206ENST00000479542 BIRC7Q96CA5 298 aa13.85□□□□□ -0.19
ABCF1-206ENST00000479542 LMLNQ96KR4 655 aa13.85□□□□□ -0.19
ABCF1-206ENST00000479542 HSFY1Q96LI6 401 aa13.85□□□□□ -0.19
ABCF1-206ENST00000479542 IPO9Q96P70 1041 aaKnown RBP13.85□□□□□ -0.19
ABCF1-206ENST00000479542 DDX50Q9BQ39 737 aaKnown RBP13.85□□□□□ -0.19
ABCF1-206ENST00000479542 ORAI3Q9BRQ5 295 aa13.85□□□□□ -0.19
ABCF1-206ENST00000479542 SCAND2PQ9GZW5 306 aaPredicted RBP13.85□□□□□ -0.19
ABCF1-206ENST00000479542 RSPH9Q9H1X1 276 aaPredicted RBP13.85□□□□□ -0.19
ABCF1-206ENST00000479542 C6orf106Q9H6K1 298 aaPredicted RBP13.85□□□□□ -0.19
ABCF1-206ENST00000479542 ABCB8Q9NUT2 735 aa13.85□□□□□ -0.19
ABCF1-206ENST00000479542 SNX11Q9Y5W9 270 aa13.85□□□□□ -0.19
ABCF1-206ENST00000479542 APC2O95996 2303 aa13.85□□□□□ -0.19
ABCF1-206ENST00000479542 URB1O60287 2271 aaKnown RBP13.84□□□□□ -0.19
ABCF1-206ENST00000479542 CELSR3Q9NYQ7 3312 aa13.84□□□□□ -0.19
ABCF1-206ENST00000479542 YJEFN3A6XGL0 299 aa13.84□□□□□ -0.19
ABCF1-206ENST00000479542 E7ENQ6 273 aa13.84□□□□□ -0.19
ABCF1-206ENST00000479542 O00370 1275 aa13.84□□□□□ -0.19
ABCF1-206ENST00000479542 VILLO15195 856 aa13.84□□□□□ -0.19
ABCF1-206ENST00000479542 C1SP09871 688 aa13.84□□□□□ -0.19
ABCF1-206ENST00000479542 ATXN1LP0C7T5 689 aaKnown RBP13.84□□□□□ -0.19
ABCF1-206ENST00000479542 PRR29P0C7W0 189 aa13.84□□□□□ -0.19
ABCF1-206ENST00000479542 POLR2EP19388 210 aaKnown RBP13.84□□□□□ -0.19
ABCF1-206ENST00000479542 SLC11A2P49281 568 aa13.84□□□□□ -0.19
ABCF1-206ENST00000479542 CCT8P50990 548 aa13.84□□□□□ -0.19
ABCF1-206ENST00000479542 CNGA2Q16280 664 aa13.84□□□□□ -0.19
ABCF1-206ENST00000479542 FNDC3BQ53EP0 1204 aaKnown RBP13.84□□□□□ -0.19
ABCF1-206ENST00000479542 ZNF776Q68DI1 518 aaPredicted RBP13.84□□□□□ -0.19
ABCF1-206ENST00000479542 BEND5Q7L4P6 421 aa13.84□□□□□ -0.19
ABCF1-206ENST00000479542 PDZD3Q86UT5 571 aa13.84□□□□□ -0.19
ABCF1-206ENST00000479542 TMPRSS12Q86WS5 348 aa13.84□□□□□ -0.19
ABCF1-206ENST00000479542 PDCD7Q8N8D1 485 aaKnown RBP13.84□□□□□ -0.19
ABCF1-206ENST00000479542 SKA1Q96BD8 255 aa13.84□□□□□ -0.19
ABCF1-206ENST00000479542 ERLEC1Q96DZ1 483 aa13.84□□□□□ -0.19
ABCF1-206ENST00000479542 MMRN2Q9H8L6 949 aa13.84□□□□□ -0.19
ABCF1-206ENST00000479542 ADAMTS1Q9UHI8 967 aa13.84□□□□□ -0.19
ABCF1-206ENST00000479542 MAPK8IP1Q9UQF2 711 aa13.84□□□□□ -0.19
ABCF1-206ENST00000479542 NCKAP1Q9Y2A7 1128 aa13.84□□□□□ -0.19
ABCF1-206ENST00000479542 ATP6V1DQ9Y5K8 247 aa13.84□□□□□ -0.19
ABCF1-206ENST00000479542 NBEAQ8NFP9 2946 aa13.84□□□□□ -0.19
ABCF1-206ENST00000479542 MUC22E2RYF6 1773 aaPredicted RBP13.83□□□□□ -0.19
ABCF1-206ENST00000479542 A0A087WV48 116 aa13.83□□□□□ -0.2
ABCF1-206ENST00000479542 A0A1W2PPC4 97 aa13.83□□□□□ -0.2
ABCF1-206ENST00000479542 TARSL2A2RTX5 802 aaKnown RBP13.83□□□□□ -0.2
ABCF1-206ENST00000479542 TULP2O00295 520 aa13.83□□□□□ -0.2
ABCF1-206ENST00000479542 YKT6O15498 198 aa13.83□□□□□ -0.2
ABCF1-206ENST00000479542 ACSL4O60488 711 aa13.83□□□□□ -0.2
ABCF1-206ENST00000479542 FBXO21O94952 628 aa13.83□□□□□ -0.2
ABCF1-206ENST00000479542 ZNF202O95125 648 aa13.83□□□□□ -0.2
ABCF1-206ENST00000479542 HLA-EP13747 358 aa13.83□□□□□ -0.2
ABCF1-206ENST00000479542 RPL34P49207 117 aaKnown RBP13.83□□□□□ -0.2
ABCF1-206ENST00000479542 ADIGQ0VDE8 80 aa13.83□□□□□ -0.2
ABCF1-206ENST00000479542 NUMA1Q14980 2115 aa13.83□□□□□ -0.2
ABCF1-206ENST00000479542 GOLGA7BQ2TAP0 167 aa13.83□□□□□ -0.2
ABCF1-206ENST00000479542 HNRNPA1L2Q32P51 320 aaKnown RBP13.83□□□□□ -0.2
ABCF1-206ENST00000479542 SOWAHCQ53LP3 525 aaPredicted RBP13.83□□□□□ -0.2
ABCF1-206ENST00000479542 SIX6OS1Q8N1H7 587 aa13.83□□□□□ -0.2
ABCF1-206ENST00000479542 CACTIN-AS1Q8N1I8 211 aa13.83□□□□□ -0.2
ABCF1-206ENST00000479542 MYO19Q96H55 970 aa13.83□□□□□ -0.2
ABCF1-206ENST00000479542 GSDMAQ96QA5 445 aa13.83□□□□□ -0.2
ABCF1-206ENST00000479542 RMND1Q9NWS8 449 aa13.83□□□□□ -0.2
ABCF1-206ENST00000479542 SFMBT1Q9UHJ3 866 aa13.83□□□□□ -0.2
ABCF1-206ENST00000479542 FZD4Q9ULV1 537 aa13.83□□□□□ -0.2
ABCF1-206ENST00000479542 COL5A1P20908 1838 aaPredicted RBP13.83□□□□□ -0.2
ABCF1-206ENST00000479542 SMG1Q96Q15 3661 aaKnown RBP13.83□□□□□ -0.2
ABCF1-206ENST00000479542 ITPR1Q14643 2758 aa13.82□□□□□ -0.2
ABCF1-206ENST00000479542 A0A1B0GTQ1 180 aa13.82□□□□□ -0.2
ABCF1-206ENST00000479542 TRABD2BA6NFA1 517 aa13.82□□□□□ -0.2
ABCF1-206ENST00000479542 RNASEH1O60930 286 aaKnown RBP13.82□□□□□ -0.2
ABCF1-206ENST00000479542 IGHV4-34P06331 123 aa13.82□□□□□ -0.2
ABCF1-206ENST00000479542 SRPRAP08240 638 aaKnown RBP13.82□□□□□ -0.2
ABCF1-206ENST00000479542 CCR5P51681 352 aa13.82□□□□□ -0.2
ABCF1-206ENST00000479542 ST8SIA6P61647 398 aa13.82□□□□□ -0.2
ABCF1-206ENST00000479542 LRRC63Q05C16 580 aa13.82□□□□□ -0.2
ABCF1-206ENST00000479542 MEA1Q16626 185 aa13.82□□□□□ -0.2
ABCF1-206ENST00000479542 CBWD6Q4V339 395 aa13.82□□□□□ -0.2
ABCF1-206ENST00000479542 FAM133BQ5BKY9 247 aaKnown RBP13.82□□□□□ -0.2
ABCF1-206ENST00000479542 CBWD3Q5JTY5 395 aa13.82□□□□□ -0.2
ABCF1-206ENST00000479542 CBWD5Q5RIA9 395 aa13.82□□□□□ -0.2
ABCF1-206ENST00000479542 KIAA0895LQ68EN5 471 aa13.82□□□□□ -0.2
ABCF1-206ENST00000479542 SMYD5Q6GMV2 418 aa13.82□□□□□ -0.2
ABCF1-206ENST00000479542 FOXR2Q6PJQ5 311 aa13.82□□□□□ -0.2
ABCF1-206ENST00000479542 FAM124AQ86V42 546 aa13.82□□□□□ -0.2
ABCF1-206ENST00000479542 SPATA20Q8TB22 786 aa13.82□□□□□ -0.2
ABCF1-206ENST00000479542 CYB5D2Q8WUJ1 264 aa13.82□□□□□ -0.2
ABCF1-206ENST00000479542 NDRG1Q92597 394 aaKnown RBP13.82□□□□□ -0.2
ABCF1-206ENST00000479542 EEF2KMTQ96G04 330 aa13.82□□□□□ -0.2
ABCF1-206ENST00000479542 PABPC3Q9H361 631 aaKnown RBP13.82□□□□□ -0.2
ABCF1-206ENST00000479542 METTL14Q9HCE5 456 aaKnown RBP13.82□□□□□ -0.2
ABCF1-206ENST00000479542 BTBD3Q9Y2F9 522 aa13.82□□□□□ -0.2
ABCF1-206ENST00000479542 ITIH6Q6UXX5 1313 aa13.82□□□□□ -0.2
ABCF1-206ENST00000479542 LOC400499M0QZD8 3231 aa13.81□□□□□ -0.2
ABCF1-206ENST00000479542 GOLGA4Q13439 2230 aaKnown RBP13.81□□□□□ -0.2
ABCF1-206ENST00000479542 P4HA2O15460 535 aa13.81□□□□□ -0.2
ABCF1-206ENST00000479542 GABBR2O75899 941 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms