RNA–Protein interactions for RNA: ENST00000477447.6

TARDBP-208, Transcript of TAR DNA binding protein, human

TSL 5

Gene TARDBP, Length 409 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TARDBP-208	ENST00000477447	PPP6C	O00743	305 aa		3.75	□□□□□ -1.81
TARDBP-208	ENST00000477447	DSCR3	O14972	297 aa		3.75	□□□□□ -1.81
TARDBP-208	ENST00000477447	INPPL1	O15357	1258 aa		3.75	□□□□□ -1.81
TARDBP-208	ENST00000477447	LATS1	O95835	1130 aa		3.75	□□□□□ -1.81
TARDBP-208	ENST00000477447	TUBB4A	P04350	444 aa		3.75	□□□□□ -1.81
TARDBP-208	ENST00000477447	ST6GAL1	P15907	406 aa		3.75	□□□□□ -1.81
TARDBP-208	ENST00000477447	CERS1	P27544	350 aa		3.75	□□□□□ -1.81
TARDBP-208	ENST00000477447	IDUA	P35475	653 aa		3.75	□□□□□ -1.81
TARDBP-208	ENST00000477447	ADD2	P35612	726 aa		3.75	□□□□□ -1.81
TARDBP-208	ENST00000477447	ZNF84	P51523	738 aa		3.75	□□□□□ -1.81
TARDBP-208	ENST00000477447	RCAN1	P53805	252 aa		3.75	□□□□□ -1.81
TARDBP-208	ENST00000477447	SLC37A1	P57057	533 aa		3.75	□□□□□ -1.81
TARDBP-208	ENST00000477447	FOXL2	P58012	376 aa		3.75	□□□□□ -1.81
TARDBP-208	ENST00000477447	DMWD	Q09019	674 aa		3.75	□□□□□ -1.81
TARDBP-208	ENST00000477447	MTA1	Q13330	715 aa		3.75	□□□□□ -1.81
TARDBP-208	ENST00000477447	ADCK5	Q3MIX3	580 aa		3.75	□□□□□ -1.81
TARDBP-208	ENST00000477447	TBRG1	Q3YBR2	411 aa		3.75	□□□□□ -1.81
TARDBP-208	ENST00000477447	ANXA2R	Q3ZCQ2	193 aa		3.75	□□□□□ -1.81
TARDBP-208	ENST00000477447	GLE1	Q53GS7	698 aa	Known RBP	3.75	□□□□□ -1.81
TARDBP-208	ENST00000477447	DPY19L2P1	Q6NXN4	242 aa		3.75	□□□□□ -1.81
TARDBP-208	ENST00000477447	DHRS13	Q6UX07	377 aa		3.75	□□□□□ -1.81
TARDBP-208	ENST00000477447	SYT13	Q7L8C5	426 aa		3.75	□□□□□ -1.81
TARDBP-208	ENST00000477447	RFX6	Q8HWS3	928 aa		3.75	□□□□□ -1.81
TARDBP-208	ENST00000477447	CNGA4	Q8IV77	575 aa		3.75	□□□□□ -1.81
TARDBP-208	ENST00000477447	GALNT16	Q8N428	558 aa		3.75	□□□□□ -1.81
TARDBP-208	ENST00000477447	ZNF398	Q8TD17	642 aa		3.75	□□□□□ -1.81
TARDBP-208	ENST00000477447	AFG1L	Q8WV93	481 aa		3.75	□□□□□ -1.81
TARDBP-208	ENST00000477447	PIGK	Q92643	395 aa		3.75	□□□□□ -1.81
TARDBP-208	ENST00000477447	MAP4K1	Q92918	833 aa		3.75	□□□□□ -1.81
TARDBP-208	ENST00000477447	FCRL5	Q96RD9	977 aa		3.75	□□□□□ -1.81
TARDBP-208	ENST00000477447	FAM118B	Q9BPY3	351 aa		3.75	□□□□□ -1.81
TARDBP-208	ENST00000477447	ISCA1	Q9BUE6	129 aa		3.75	□□□□□ -1.81
TARDBP-208	ENST00000477447	HTATIP2	Q9BUP3	242 aa		3.75	□□□□□ -1.81
TARDBP-208	ENST00000477447	ITM2C	Q9NQX7	267 aa		3.75	□□□□□ -1.81
TARDBP-208	ENST00000477447	FLRT1	Q9NZU1	646 aa		3.75	□□□□□ -1.81
TARDBP-208	ENST00000477447	KIF17	Q9P2E2	1029 aa		3.75	□□□□□ -1.81
TARDBP-208	ENST00000477447	COPG1	Q9Y678	874 aa	Known RBP	3.75	□□□□□ -1.81
TARDBP-208	ENST00000477447	CNTN5	O94779	1100 aa		3.74	□□□□□ -1.81
TARDBP-208	ENST00000477447	PLAU	P00749	431 aa		3.74	□□□□□ -1.81
TARDBP-208	ENST00000477447	CYP3A4	P08684	503 aa		3.74	□□□□□ -1.81
TARDBP-208	ENST00000477447	ALDOC	P09972	364 aa	Known RBP	3.74	□□□□□ -1.81
TARDBP-208	ENST00000477447	SFPQ	P23246	707 aa	Known RBP eCLIP	3.74	□□□□□ -1.81
TARDBP-208	ENST00000477447	PCP4	P48539	62 aa		3.74	□□□□□ -1.81
TARDBP-208	ENST00000477447	CDK7	P50613	346 aa		3.74	□□□□□ -1.81
TARDBP-208	ENST00000477447	SHC2	P98077	582 aa		3.74	□□□□□ -1.81
TARDBP-208	ENST00000477447	B4GALNT1	Q00973	533 aa		3.74	□□□□□ -1.81
TARDBP-208	ENST00000477447	SRSF4	Q08170	494 aa	Known RBP	3.74	□□□□□ -1.81
TARDBP-208	ENST00000477447	FAM110C	Q1W6H9	321 aa		3.74	□□□□□ -1.81
TARDBP-208	ENST00000477447	SUPT20HL1	Q3ZLR7	823 aa		3.74	□□□□□ -1.81
TARDBP-208	ENST00000477447	ANKRD45	Q5TZF3	282 aa		3.74	□□□□□ -1.81
TARDBP-208	ENST00000477447	TMEM88	Q6PEY1	159 aa		3.74	□□□□□ -1.81
TARDBP-208	ENST00000477447	RINL	Q6ZS11	566 aa		3.74	□□□□□ -1.81
TARDBP-208	ENST00000477447	YTHDF3	Q7Z739	585 aa	Known RBP	3.74	□□□□□ -1.81
TARDBP-208	ENST00000477447	MOGAT3	Q86VF5	341 aa		3.74	□□□□□ -1.81
TARDBP-208	ENST00000477447	C2CD5	Q86YS7	1000 aa		3.74	□□□□□ -1.81
TARDBP-208	ENST00000477447	RHPN2	Q8IUC4	686 aa		3.74	□□□□□ -1.81
TARDBP-208	ENST00000477447	UEVLD	Q8IX04	471 aa		3.74	□□□□□ -1.81
TARDBP-208	ENST00000477447	FTSJ3	Q8IY81	847 aa	Known RBP	3.74	□□□□□ -1.81
TARDBP-208	ENST00000477447	ADGRF3	Q8IZF5	1079 aa		3.74	□□□□□ -1.81
TARDBP-208	ENST00000477447	MYRIP	Q8NFW9	859 aa		3.74	□□□□□ -1.81
TARDBP-208	ENST00000477447	OR6Y1	Q8NGX8	325 aa		3.74	□□□□□ -1.81
TARDBP-208	ENST00000477447	SLC2A12	Q8TD20	617 aa		3.74	□□□□□ -1.81
TARDBP-208	ENST00000477447	PIGS	Q96S52	555 aa		3.74	□□□□□ -1.81
TARDBP-208	ENST00000477447	TM2D2	Q9BX73	214 aa		3.74	□□□□□ -1.81
TARDBP-208	ENST00000477447	QTRT1	Q9BXR0	403 aa	Known RBP	3.74	□□□□□ -1.81
TARDBP-208	ENST00000477447	SEMA4C	Q9C0C4	833 aa		3.74	□□□□□ -1.81
TARDBP-208	ENST00000477447	OSBPL5	Q9H0X9	879 aa	Predicted RBP	3.74	□□□□□ -1.81
TARDBP-208	ENST00000477447	G6PC2	Q9NQR9	355 aa		3.74	□□□□□ -1.81
TARDBP-208	ENST00000477447	NOL12	Q9UGY1	213 aa	Known RBP eCLIP	3.74	□□□□□ -1.81
TARDBP-208	ENST00000477447	FEM1B	Q9UK73	627 aa		3.74	□□□□□ -1.81
TARDBP-208	ENST00000477447	BAG5	Q9UL15	447 aa		3.74	□□□□□ -1.81
TARDBP-208	ENST00000477447	FRMD4B	Q9Y2L6	1034 aa		3.74	□□□□□ -1.81
TARDBP-208	ENST00000477447	GPR52	Q9Y2T5	361 aa		3.74	□□□□□ -1.81
TARDBP-208	ENST00000477447	PCDHA10	Q9Y5I2	948 aa		3.74	□□□□□ -1.81
TARDBP-208	ENST00000477447	DGKB	Q9Y6T7	804 aa		3.74	□□□□□ -1.81
TARDBP-208	ENST00000477447	EMSY	Q7Z589	1322 aa		3.73	□□□□□ -1.81
TARDBP-208	ENST00000477447	SMIM35	A0A1B0GVV1	85 aa		3.73	□□□□□ -1.81
TARDBP-208	ENST00000477447	SLC22A23	A1A5C7	686 aa		3.73	□□□□□ -1.81
TARDBP-208	ENST00000477447		B9A039	149 aa		3.73	□□□□□ -1.81
TARDBP-208	ENST00000477447	GRM8	O00222	908 aa		3.73	□□□□□ -1.81
TARDBP-208	ENST00000477447	FAM155B	O75949	473 aa		3.73	□□□□□ -1.81
TARDBP-208	ENST00000477447	ENO1	P06733	434 aa	Known RBP	3.73	□□□□□ -1.81
TARDBP-208	ENST00000477447	CYP21A2	P08686	494 aa		3.73	□□□□□ -1.81
TARDBP-208	ENST00000477447	RFPL3S	P0C7P2	107 aa		3.73	□□□□□ -1.81
TARDBP-208	ENST00000477447	AKR1A1	P14550	325 aa		3.73	□□□□□ -1.81
TARDBP-208	ENST00000477447	IGFBP2	P18065	325 aa		3.73	□□□□□ -1.81
TARDBP-208	ENST00000477447	RXRA	P19793	462 aa		3.73	□□□□□ -1.81
TARDBP-208	ENST00000477447	TGM2	P21980	687 aa		3.73	□□□□□ -1.81
TARDBP-208	ENST00000477447	RPS6KB1	P23443	525 aa		3.73	□□□□□ -1.81
TARDBP-208	ENST00000477447	SOX2	P48431	317 aa		3.73	□□□□□ -1.81
TARDBP-208	ENST00000477447	AARS	P49588	968 aa	Known RBP eCLIP	3.73	□□□□□ -1.81
TARDBP-208	ENST00000477447	PPM1F	P49593	454 aa	Predicted RBP	3.73	□□□□□ -1.81
TARDBP-208	ENST00000477447	RBM5	P52756	815 aa	Known RBP eCLIP	3.73	□□□□□ -1.81
TARDBP-208	ENST00000477447	ARL4C	P56559	192 aa		3.73	□□□□□ -1.81
TARDBP-208	ENST00000477447	C21orf58	P58505	322 aa		3.73	□□□□□ -1.81
TARDBP-208	ENST00000477447	BIRC3	Q13489	604 aa		3.73	□□□□□ -1.81
TARDBP-208	ENST00000477447	SMAD1	Q15797	465 aa	Known RBP	3.73	□□□□□ -1.81
TARDBP-208	ENST00000477447	EZH2	Q15910	746 aa	Known RBP	3.73	□□□□□ -1.81
TARDBP-208	ENST00000477447	SRSF7	Q16629	238 aa	Known RBP eCLIP	3.73	□□□□□ -1.81	2e-10	■■■□□ 18.4
TARDBP-208	ENST00000477447	LRRC24	Q50LG9	513 aa		3.73	□□□□□ -1.81

Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms