RNA–Protein interactions for RNA: ENST00000475243.5

VAPB-204, Transcript of VAMP associated protein B and C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPB, Length 7,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-204ENST00000475243 EPHX4Q8IUS5 362 aa11.2□□□□□ -0.62
VAPB-204ENST00000475243 ZSCAN18Q8TBC5 510 aaPredicted RBP11.2□□□□□ -0.62
VAPB-204ENST00000475243 ARHGEF3Q9NR81 526 aa11.2□□□□□ -0.62
VAPB-204ENST00000475243 DNPEPQ9ULA0 475 aa11.2□□□□□ -0.62
VAPB-204ENST00000475243 TMEM114B3SHH9 223 aa11.2□□□□□ -0.62
VAPB-204ENST00000475243 POU5F2Q8N7G0 328 aa11.2□□□□□ -0.62
VAPB-204ENST00000475243 HTR3CQ8WXA8 447 aa11.2□□□□□ -0.62
VAPB-204ENST00000475243 BBS4Q96RK4 519 aa11.2□□□□□ -0.62
VAPB-204ENST00000475243 CDK5RAP1Q96SZ6 601 aaKnown RBP11.2□□□□□ -0.62
VAPB-204ENST00000475243 FBXL21Q9UKT6 434 aa11.2□□□□□ -0.62
VAPB-204ENST00000475243 MAGEA13PA6NCF6 341 aa11.2□□□□□ -0.62
VAPB-204ENST00000475243 CAPN1P07384 714 aa11.2□□□□□ -0.62
VAPB-204ENST00000475243 IGFBP4P22692 258 aa11.2□□□□□ -0.62
VAPB-204ENST00000475243 MRPS35P82673 323 aaKnown RBP11.2□□□□□ -0.62
VAPB-204ENST00000475243 PLEKHA7Q6IQ23 1121 aa11.2□□□□□ -0.62
VAPB-204ENST00000475243 ISLR2Q6UXK2 745 aa11.2□□□□□ -0.62
VAPB-204ENST00000475243 PRR23CQ6ZRP0 262 aa11.2□□□□□ -0.62
VAPB-204ENST00000475243 TMEM237Q96Q45 408 aa11.2□□□□□ -0.62
VAPB-204ENST00000475243 SPRTNQ9H040 489 aaPredicted RBP11.2□□□□□ -0.62
VAPB-204ENST00000475243 RHBGQ9H310 441 aa11.2□□□□□ -0.62
VAPB-204ENST00000475243 PIPSLA2A3N6 862 aa11.19□□□□□ -0.62
VAPB-204ENST00000475243 TM9SF1O15321 606 aa11.19□□□□□ -0.62
VAPB-204ENST00000475243 GRTP1Q5TC63 336 aa11.19□□□□□ -0.62
VAPB-204ENST00000475243 DEFB106AQ8N104 65 aa11.19□□□□□ -0.62
VAPB-204ENST00000475243 WDR36Q8NI36 951 aaKnown RBP11.19□□□□□ -0.62
VAPB-204ENST00000475243 P2RX7Q99572 595 aaKnown RBP11.19□□□□□ -0.62
VAPB-204ENST00000475243 CXorf56Q9H5V9 222 aa11.19□□□□□ -0.62
VAPB-204ENST00000475243 TCF7L2Q9NQB0 619 aa11.19□□□□□ -0.62
VAPB-204ENST00000475243 PIK3C2BO00750 1634 aa11.19□□□□□ -0.62
VAPB-204ENST00000475243 GAKO14976 1311 aa11.19□□□□□ -0.62
VAPB-204ENST00000475243 FAM25AB3EWG3 89 aa11.19□□□□□ -0.62
VAPB-204ENST00000475243 FAM25CB3EWG5 89 aa11.19□□□□□ -0.62
VAPB-204ENST00000475243 FAM25GB3EWG6 89 aa11.19□□□□□ -0.62
VAPB-204ENST00000475243 BTN3A1O00481 513 aa11.19□□□□□ -0.62
VAPB-204ENST00000475243 WNT10BO00744 389 aa11.19□□□□□ -0.62
VAPB-204ENST00000475243 NCAM2O15394 837 aa11.19□□□□□ -0.62
VAPB-204ENST00000475243 CNOT3O75175 753 aaKnown RBP11.19□□□□□ -0.62
VAPB-204ENST00000475243 CLTBP09497 229 aa11.19□□□□□ -0.62
VAPB-204ENST00000475243 FASTKQ14296 549 aaKnown RBP11.19□□□□□ -0.62
VAPB-204ENST00000475243 KPNB1Q14974 876 aaKnown RBP11.19□□□□□ -0.62
VAPB-204ENST00000475243 SETMARQ53H47 684 aaPredicted RBP11.19□□□□□ -0.62
VAPB-204ENST00000475243 FGD3Q5JSP0 725 aa11.19□□□□□ -0.62
VAPB-204ENST00000475243 ZNF621Q6ZSS3 439 aa11.19□□□□□ -0.62
VAPB-204ENST00000475243 SPG21Q9NZD8 308 aa11.19□□□□□ -0.62
VAPB-204ENST00000475243 ARMCX1Q9P291 453 aa11.19□□□□□ -0.62
VAPB-204ENST00000475243 PCDHGA4Q9Y5G9 962 aa11.19□□□□□ -0.62
VAPB-204ENST00000475243 PPRC1Q5VV67 1664 aaKnown RBP11.19□□□□□ -0.62
VAPB-204ENST00000475243 H3BN98 237 aa11.19□□□□□ -0.62
VAPB-204ENST00000475243 ABCG1P45844 678 aa11.19□□□□□ -0.62
VAPB-204ENST00000475243 RPL21P46778 160 aaKnown RBP11.19□□□□□ -0.62
VAPB-204ENST00000475243 CRADDP78560 199 aa11.19□□□□□ -0.62
VAPB-204ENST00000475243 GRIK3Q13003 919 aa11.19□□□□□ -0.62
VAPB-204ENST00000475243 AADACL2Q6P093 401 aa11.19□□□□□ -0.62
VAPB-204ENST00000475243 C19orf18Q8NEA5 215 aa11.19□□□□□ -0.62
VAPB-204ENST00000475243 TBCDQ9BTW9 1192 aa11.19□□□□□ -0.62
VAPB-204ENST00000475243 LIMD1Q9UGP4 676 aa11.19□□□□□ -0.62
VAPB-204ENST00000475243 POLG2Q9UHN1 485 aa11.19□□□□□ -0.62
VAPB-204ENST00000475243 RBAK-RBAKDNI3L0D1 243 aa11.19□□□□□ -0.62
VAPB-204ENST00000475243 TK2O00142 265 aa11.19□□□□□ -0.62
VAPB-204ENST00000475243 HMGCRP04035 888 aa11.19□□□□□ -0.62
VAPB-204ENST00000475243 TGFB3P10600 412 aa11.19□□□□□ -0.62
VAPB-204ENST00000475243 SHMT1P34896 483 aa11.19□□□□□ -0.62
VAPB-204ENST00000475243 C1QBPQ07021 282 aaKnown RBP11.19□□□□□ -0.62
VAPB-204ENST00000475243 ACVR2BQ13705 512 aa11.19□□□□□ -0.62
VAPB-204ENST00000475243 FSCN1Q16658 493 aaKnown RBP11.19□□□□□ -0.62
VAPB-204ENST00000475243 GSTA3Q16772 222 aa11.19□□□□□ -0.62
VAPB-204ENST00000475243 TISP43B9A030 160 aa11.19□□□□□ -0.62
VAPB-204ENST00000475243 RIPK2O43353 540 aa11.19□□□□□ -0.62
VAPB-204ENST00000475243 KPNA6O60684 536 aa11.19□□□□□ -0.62
VAPB-204ENST00000475243 PSMB9P28065 219 aa11.19□□□□□ -0.62
VAPB-204ENST00000475243 SLC12A3P55017 1021 aa11.19□□□□□ -0.62
VAPB-204ENST00000475243 CORO7P57737 925 aa11.19□□□□□ -0.62
VAPB-204ENST00000475243 DDR2Q16832 855 aa11.19□□□□□ -0.62
VAPB-204ENST00000475243 PPM1LQ5SGD2 360 aa11.19□□□□□ -0.62
VAPB-204ENST00000475243 CYP20A1Q6UW02 462 aa11.19□□□□□ -0.62
VAPB-204ENST00000475243 TRAPPC5Q8IUR0 188 aa11.19□□□□□ -0.62
VAPB-204ENST00000475243 METTL6Q8TCB7 284 aa11.19□□□□□ -0.62
VAPB-204ENST00000475243 MTMR8Q96EF0 704 aa11.19□□□□□ -0.62
VAPB-204ENST00000475243 KAZALD1Q96I82 304 aa11.19□□□□□ -0.62
VAPB-204ENST00000475243 FUT8Q9BYC5 575 aa11.19□□□□□ -0.62
VAPB-204ENST00000475243 OSBPL6Q9BZF3 934 aa11.19□□□□□ -0.62
VAPB-204ENST00000475243 DCLK3Q9C098 648 aa11.19□□□□□ -0.62
VAPB-204ENST00000475243 HPSEQ9Y251 543 aa11.19□□□□□ -0.62
VAPB-204ENST00000475243 CEP170BQ9Y4F5 1589 aaPredicted RBP11.19□□□□□ -0.62
VAPB-204ENST00000475243 ATG7O95352 703 aa11.19□□□□□ -0.62
VAPB-204ENST00000475243 BCL2L1Q07817 233 aa11.19□□□□□ -0.62
VAPB-204ENST00000475243 GJC2Q5T442 439 aaPredicted RBP11.19□□□□□ -0.62
VAPB-204ENST00000475243 SLC27A1Q6PCB7 646 aa11.19□□□□□ -0.62
VAPB-204ENST00000475243 CYP2R1Q6VVX0 501 aa11.19□□□□□ -0.62
VAPB-204ENST00000475243 MILR1Q7Z6M3 343 aa11.19□□□□□ -0.62
VAPB-204ENST00000475243 CDK20Q8IZL9 346 aa11.19□□□□□ -0.62
VAPB-204ENST00000475243 COL26A1Q96A83 441 aa11.19□□□□□ -0.62
VAPB-204ENST00000475243 GAD1Q99259 594 aa11.19□□□□□ -0.62
VAPB-204ENST00000475243 TBL1YQ9BQ87 522 aa11.19□□□□□ -0.62
VAPB-204ENST00000475243 ZDHHC6Q9H6R6 413 aa11.19□□□□□ -0.62
VAPB-204ENST00000475243 PCDH9Q9HC56 1237 aa11.19□□□□□ -0.62
VAPB-204ENST00000475243 SYBUQ9NX95 663 aa11.19□□□□□ -0.62
VAPB-204ENST00000475243 TAS2R13Q9NYV9 303 aa11.19□□□□□ -0.62
VAPB-204ENST00000475243 TRIM17Q9Y577 477 aa11.19□□□□□ -0.62
VAPB-204ENST00000475243 AP4S1Q9Y587 144 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms