RNA–Protein interactions for RNA: ENST00000474648.5

COL8A1-206, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 5

Gene COL8A1, Length 841 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-206ENST00000474648 SH3BP1Q9Y3L3 701 aa10.36□□□□□ -0.75
COL8A1-206ENST00000474648 ANAPC1Q9H1A4 1944 aa10.35□□□□□ -0.75
COL8A1-206ENST00000474648 PI4K2BG5E9Z4 385 aa10.35□□□□□ -0.75
COL8A1-206ENST00000474648 ECI2O75521 394 aa10.35□□□□□ -0.75
COL8A1-206ENST00000474648 ZRANB2O95218 330 aaKnown RBP eCLIP10.35□□□□□ -0.75
COL8A1-206ENST00000474648 IL9P15248 144 aa10.35□□□□□ -0.75
COL8A1-206ENST00000474648 TACR2P21452 398 aa10.35□□□□□ -0.75
COL8A1-206ENST00000474648 MSNP26038 577 aaKnown RBP10.35□□□□□ -0.75
COL8A1-206ENST00000474648 GJC1P36383 396 aa10.35□□□□□ -0.75
COL8A1-206ENST00000474648 SLC11A2P49281 568 aa10.35□□□□□ -0.75
COL8A1-206ENST00000474648 RWDD2BP57060 319 aa10.35□□□□□ -0.75
COL8A1-206ENST00000474648 MTA1Q13330 715 aa10.35□□□□□ -0.75
COL8A1-206ENST00000474648 HTR4Q13639 388 aa10.35□□□□□ -0.75
COL8A1-206ENST00000474648 AUHQ13825 339 aaKnown RBP10.35□□□□□ -0.75
COL8A1-206ENST00000474648 PDK2Q15119 407 aa10.35□□□□□ -0.75
COL8A1-206ENST00000474648 EFHC2Q5JST6 749 aa10.35□□□□□ -0.75
COL8A1-206ENST00000474648 ADGRF1Q5T601 910 aa10.35□□□□□ -0.75
COL8A1-206ENST00000474648 MANEALQ5VSG8 457 aa10.35□□□□□ -0.75
COL8A1-206ENST00000474648 PAPD7Q5XG87 772 aaKnown RBP10.35□□□□□ -0.75
COL8A1-206ENST00000474648 RAP1GAP2Q684P5 730 aa10.35□□□□□ -0.75
COL8A1-206ENST00000474648 FBXL22Q6P050 247 aa10.35□□□□□ -0.75
COL8A1-206ENST00000474648 MFSD7Q6UXD7 560 aa10.35□□□□□ -0.75
COL8A1-206ENST00000474648 VITQ6UXI7 678 aa10.35□□□□□ -0.75
COL8A1-206ENST00000474648 SYT10Q6XYQ8 523 aa10.35□□□□□ -0.75
COL8A1-206ENST00000474648 MFSD6LQ8IWD5 586 aa10.35□□□□□ -0.75
COL8A1-206ENST00000474648 RCOR2Q8IZ40 523 aa10.35□□□□□ -0.75
COL8A1-206ENST00000474648 ADGRG2Q8IZP9 1017 aa10.35□□□□□ -0.75
COL8A1-206ENST00000474648 ZNF454Q8N9F8 522 aa10.35□□□□□ -0.75
COL8A1-206ENST00000474648 KCTD6Q8NC69 237 aa10.35□□□□□ -0.75
COL8A1-206ENST00000474648 EXD1Q8NHP7 514 aa10.35□□□□□ -0.75
COL8A1-206ENST00000474648 BPIFB1Q8TDL5 484 aa10.35□□□□□ -0.75
COL8A1-206ENST00000474648 IGSF8Q969P0 613 aa10.35□□□□□ -0.75
COL8A1-206ENST00000474648 E2F7Q96AV8 911 aa10.35□□□□□ -0.75
COL8A1-206ENST00000474648 ELSPBP1Q96BH3 223 aa10.35□□□□□ -0.75
COL8A1-206ENST00000474648 C16orf45Q96MC5 204 aaPredicted RBP10.35□□□□□ -0.75
COL8A1-206ENST00000474648 ZFP14Q9HCL3 533 aa10.35□□□□□ -0.75
COL8A1-206ENST00000474648 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.35□□□□□ -0.75
COL8A1-206ENST00000474648 KLHL11Q9NVR0 708 aa10.35□□□□□ -0.75
COL8A1-206ENST00000474648 DDX56Q9NY93 547 aaKnown RBP10.35□□□□□ -0.75
COL8A1-206ENST00000474648 CWC15Q9P013 229 aaKnown RBP10.35□□□□□ -0.75
COL8A1-206ENST00000474648 DNAI1Q9UI46 699 aa10.35□□□□□ -0.75
COL8A1-206ENST00000474648 LSM7Q9UK45 103 aaKnown RBP10.35□□□□□ -0.75
COL8A1-206ENST00000474648 NEU3Q9UQ49 428 aa10.35□□□□□ -0.75
COL8A1-206ENST00000474648 ZNF510Q9Y2H8 683 aa10.35□□□□□ -0.75
COL8A1-206ENST00000474648 C2orf16Q68DN1 1984 aa10.35□□□□□ -0.75
COL8A1-206ENST00000474648 XIRP2A4UGR9 3374 aa10.34□□□□□ -0.75
COL8A1-206ENST00000474648 MYO16Q9Y6X6 1858 aa10.34□□□□□ -0.75
COL8A1-206ENST00000474648 IGLV3-10A0A075B6K4 115 aa10.34□□□□□ -0.75
COL8A1-206ENST00000474648 TRDMT1O14717 391 aaKnown RBP10.34□□□□□ -0.75
COL8A1-206ENST00000474648 LRIG2O94898 1065 aa10.34□□□□□ -0.75
COL8A1-206ENST00000474648 KRT1P04264 644 aa10.34□□□□□ -0.75
COL8A1-206ENST00000474648 TUBB4AP04350 444 aa10.34□□□□□ -0.75
COL8A1-206ENST00000474648 PRLRP16471 622 aa10.34□□□□□ -0.75
COL8A1-206ENST00000474648 SP100P23497 879 aaPredicted RBP10.34□□□□□ -0.75
COL8A1-206ENST00000474648 CASQ1P31415 396 aa10.34□□□□□ -0.75
COL8A1-206ENST00000474648 CDKN2BP42772 138 aa10.34□□□□□ -0.75
COL8A1-206ENST00000474648 HCAR3P49019 387 aa10.34□□□□□ -0.75
COL8A1-206ENST00000474648 DNA2P51530 1060 aa10.34□□□□□ -0.75
COL8A1-206ENST00000474648 SGSHP51688 502 aa10.34□□□□□ -0.75
COL8A1-206ENST00000474648 CDH6P55285 790 aa10.34□□□□□ -0.75
COL8A1-206ENST00000474648 AMPD2Q01433 879 aa10.34□□□□□ -0.75
COL8A1-206ENST00000474648 FCHO2Q0JRZ9 810 aa10.34□□□□□ -0.75
COL8A1-206ENST00000474648 MMRN1Q13201 1228 aa10.34□□□□□ -0.75
COL8A1-206ENST00000474648 ZNF211Q13398 564 aaPredicted RBP10.34□□□□□ -0.75
COL8A1-206ENST00000474648 DPYSL3Q14195 570 aa10.34□□□□□ -0.75
COL8A1-206ENST00000474648 ACBD5Q5T8D3 534 aaPredicted RBP10.34□□□□□ -0.75
COL8A1-206ENST00000474648 AADACL2Q6P093 401 aa10.34□□□□□ -0.75
COL8A1-206ENST00000474648 RFWD3Q6PCD5 774 aa10.34□□□□□ -0.75
COL8A1-206ENST00000474648 SPOCD1Q6ZMY3 1216 aa10.34□□□□□ -0.75
COL8A1-206ENST00000474648 ZDHHC14Q8IZN3 488 aa10.34□□□□□ -0.75
COL8A1-206ENST00000474648 CPXM2Q8N436 756 aa10.34□□□□□ -0.75
COL8A1-206ENST00000474648 UBL4BQ8N7F7 174 aa10.34□□□□□ -0.75
COL8A1-206ENST00000474648 TTC16Q8NEE8 873 aa10.34□□□□□ -0.75
COL8A1-206ENST00000474648 OSCP1Q8WVF1 389 aa10.34□□□□□ -0.75
COL8A1-206ENST00000474648 RSAD2Q8WXG1 361 aa10.34□□□□□ -0.75
COL8A1-206ENST00000474648 FAF2Q96CS3 445 aa10.34□□□□□ -0.75
COL8A1-206ENST00000474648 ASIC4Q96FT7 647 aa10.34□□□□□ -0.75
COL8A1-206ENST00000474648 RPGRIP1Q96KN7 1286 aa10.34□□□□□ -0.75
COL8A1-206ENST00000474648 NAPGQ99747 312 aaPredicted RBP10.34□□□□□ -0.75
COL8A1-206ENST00000474648 KXD1Q9BQD3 176 aa10.34□□□□□ -0.75
COL8A1-206ENST00000474648 FAM83CQ9BQN1 747 aa10.34□□□□□ -0.75
COL8A1-206ENST00000474648 HERPUD2Q9BSE4 406 aa10.34□□□□□ -0.75
COL8A1-206ENST00000474648 LIMD1Q9UGP4 676 aa10.34□□□□□ -0.75
COL8A1-206ENST00000474648 VANGL2Q9ULK5 521 aa10.34□□□□□ -0.75
COL8A1-206ENST00000474648 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.34□□□□□ -0.75
COL8A1-206ENST00000474648 WNT6Q9Y6F9 365 aa10.34□□□□□ -0.75
COL8A1-206ENST00000474648 LRRD1A4D1F6 860 aa10.33□□□□□ -0.76
COL8A1-206ENST00000474648 CTAGE9A4FU28 777 aa10.33□□□□□ -0.76
COL8A1-206ENST00000474648 ZNF487B1APH4 448 aa10.33□□□□□ -0.76
COL8A1-206ENST00000474648 LOC730098B7Z3J9 87 aa10.33□□□□□ -0.76
COL8A1-206ENST00000474648 E9PAM4 449 aa10.33□□□□□ -0.76
COL8A1-206ENST00000474648 KCNK3O14649 394 aa10.33□□□□□ -0.76
COL8A1-206ENST00000474648 CREB3O43889 395 aa10.33□□□□□ -0.76
COL8A1-206ENST00000474648 TSPAN3O60637 253 aa10.33□□□□□ -0.76
COL8A1-206ENST00000474648 SRGAP2O75044 1071 aa10.33□□□□□ -0.76
COL8A1-206ENST00000474648 CNTN5O94779 1100 aa10.33□□□□□ -0.76
COL8A1-206ENST00000474648 GOT1P17174 413 aa10.33□□□□□ -0.76
COL8A1-206ENST00000474648 HOXC13P31276 330 aa10.33□□□□□ -0.76
COL8A1-206ENST00000474648 CXCR5P32302 372 aa10.33□□□□□ -0.76
COL8A1-206ENST00000474648 IRAK1P51617 712 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms