RNA–Protein interactions for RNA: ENST00000474643.5

VARS-223, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-223ENST00000474643 PLCB1Q9NQ66 1216 aa15.72■□□□□ 0.11
VARS-223ENST00000474643 ABCB8Q9NUT2 735 aa15.72■□□□□ 0.11
VARS-223ENST00000474643 HCN2Q9UL51 889 aa15.72■□□□□ 0.11
VARS-223ENST00000474643 CEP83Q9Y592 693 aa15.72■□□□□ 0.11
VARS-223ENST00000474643 MYO18AQ92614 2054 aaKnown RBP15.72■□□□□ 0.11
VARS-223ENST00000474643 TBL1XO60907 577 aa15.71■□□□□ 0.11
VARS-223ENST00000474643 CEACAM1P13688 526 aa15.71■□□□□ 0.11
VARS-223ENST00000474643 HOXD9P28356 352 aaPredicted RBP15.71■□□□□ 0.11
VARS-223ENST00000474643 RDXP35241 583 aaKnown RBP15.71■□□□□ 0.11
VARS-223ENST00000474643 ACADSBP45954 432 aa15.71■□□□□ 0.11
VARS-223ENST00000474643 ST8SIA6P61647 398 aa15.71■□□□□ 0.11
VARS-223ENST00000474643 FOXC1Q12948 553 aa15.71■□□□□ 0.11
VARS-223ENST00000474643 IQCB1Q15051 598 aa15.71■□□□□ 0.11
VARS-223ENST00000474643 PKDCCQ504Y2 493 aa15.71■□□□□ 0.11
VARS-223ENST00000474643 DENND1BQ6P3S1 775 aa15.71■□□□□ 0.11
VARS-223ENST00000474643 CHST9Q7L1S5 443 aa15.71■□□□□ 0.11
VARS-223ENST00000474643 BHLHA9Q7RTU4 235 aa15.71■□□□□ 0.11
VARS-223ENST00000474643 MFN1Q8IWA4 741 aa15.71■□□□□ 0.11
VARS-223ENST00000474643 AHI1Q8N157 1196 aa15.71■□□□□ 0.11
VARS-223ENST00000474643 SCML4Q8N228 414 aa15.71■□□□□ 0.11
VARS-223ENST00000474643 DEFB124Q8NES8 71 aa15.71■□□□□ 0.11
VARS-223ENST00000474643 SLC35F5Q8WV83 523 aa15.71■□□□□ 0.11
VARS-223ENST00000474643 SORCS1Q8WY21 1168 aa15.71■□□□□ 0.11
VARS-223ENST00000474643 SNX19Q92543 992 aa15.71■□□□□ 0.11
VARS-223ENST00000474643 PIWIL1Q96J94 861 aaKnown RBP15.71■□□□□ 0.11
VARS-223ENST00000474643 GPR174Q9BXC1 333 aa15.71■□□□□ 0.11
VARS-223ENST00000474643 STK33Q9BYT3 514 aa15.71■□□□□ 0.11
VARS-223ENST00000474643 HSD3B7Q9H2F3 369 aa15.71■□□□□ 0.11
VARS-223ENST00000474643 STIM2Q9P246 746 aa15.71■□□□□ 0.11
VARS-223ENST00000474643 GGA2Q9UJY4 613 aa15.71■□□□□ 0.11
VARS-223ENST00000474643 CNOT1A5YKK6 2376 aaKnown RBP15.71■□□□□ 0.11
VARS-223ENST00000474643 LRRC10BA6NIK2 292 aa15.7■□□□□ 0.1
VARS-223ENST00000474643 CDX4O14627 284 aaPredicted RBP15.7■□□□□ 0.1
VARS-223ENST00000474643 IRAK2O43187 625 aa15.7■□□□□ 0.1
VARS-223ENST00000474643 MOCS2O96007 188 aaPredicted RBP15.7■□□□□ 0.1
VARS-223ENST00000474643 APOEP02649 317 aa15.7■□□□□ 0.1
VARS-223ENST00000474643 POLR2EP19388 210 aaKnown RBP15.7■□□□□ 0.1
VARS-223ENST00000474643 CSRP1P21291 193 aaKnown RBP15.7■□□□□ 0.1
VARS-223ENST00000474643 PMLP29590 882 aa15.7■□□□□ 0.1
VARS-223ENST00000474643 CDH18Q13634 790 aa15.7■□□□□ 0.1
VARS-223ENST00000474643 MSANTD2Q6P1R3 559 aa15.7■□□□□ 0.1
VARS-223ENST00000474643 FAM124AQ86V42 546 aa15.7■□□□□ 0.1
VARS-223ENST00000474643 SLC47A2Q86VL8 602 aa15.7■□□□□ 0.1
VARS-223ENST00000474643 PASD1Q8IV76 773 aa15.7■□□□□ 0.1
VARS-223ENST00000474643 FAM217AQ8IXS0 508 aa15.7■□□□□ 0.1
VARS-223ENST00000474643 FAM71AQ8IYT1 594 aa15.7■□□□□ 0.1
VARS-223ENST00000474643 HJURPQ8NCD3 748 aaPredicted RBP15.7■□□□□ 0.1
VARS-223ENST00000474643 CLEC4CQ8WTT0 213 aa15.7■□□□□ 0.1
VARS-223ENST00000474643 CYB5D2Q8WUJ1 264 aa15.7■□□□□ 0.1
VARS-223ENST00000474643 NOX5Q96PH1 765 aa15.7■□□□□ 0.1
VARS-223ENST00000474643 MKRN2Q9H000 416 aaKnown RBP15.7■□□□□ 0.1
VARS-223ENST00000474643 GANQ9H2C0 597 aa15.7■□□□□ 0.1
VARS-223ENST00000474643 FSCN3Q9NQT6 498 aa15.7■□□□□ 0.1
VARS-223ENST00000474643 CLEC4EQ9ULY5 219 aa15.7■□□□□ 0.1
VARS-223ENST00000474643 DAAM1Q9Y4D1 1078 aa15.7■□□□□ 0.1
VARS-223ENST00000474643 PLXND1Q9Y4D7 1925 aa15.69■□□□□ 0.1
VARS-223ENST00000474643 F8VZ95 297 aa15.69■□□□□ 0.1
VARS-223ENST00000474643 ARHGAP33O14559 1287 aa15.69■□□□□ 0.1
VARS-223ENST00000474643 GIPC1O14908 333 aa15.69■□□□□ 0.1
VARS-223ENST00000474643 ACSL4O60488 711 aa15.69■□□□□ 0.1
VARS-223ENST00000474643 GFPT2O94808 682 aa15.69■□□□□ 0.1
VARS-223ENST00000474643 PABPC1P11940 636 aaKnown RBP15.69■□□□□ 0.1
VARS-223ENST00000474643 HLA-EP13747 358 aa15.69■□□□□ 0.1
VARS-223ENST00000474643 PRKCHP24723 683 aa15.69■□□□□ 0.1
VARS-223ENST00000474643 HLA-FP30511 346 aa15.69■□□□□ 0.1
VARS-223ENST00000474643 CLCN1P35523 988 aa15.69■□□□□ 0.1
VARS-223ENST00000474643 GPD2P43304 727 aa15.69■□□□□ 0.1
VARS-223ENST00000474643 PEAR1Q5VY43 1037 aaPredicted RBP15.69■□□□□ 0.1
VARS-223ENST00000474643 RNF219Q5W0B1 726 aaPredicted RBP15.69■□□□□ 0.1
VARS-223ENST00000474643 SMYD5Q6GMV2 418 aa15.69■□□□□ 0.1
VARS-223ENST00000474643 RFWD3Q6PCD5 774 aa15.69■□□□□ 0.1
VARS-223ENST00000474643 SLC41A1Q8IVJ1 513 aa15.69■□□□□ 0.1
VARS-223ENST00000474643 SCUBE3Q8IX30 993 aa15.69■□□□□ 0.1
VARS-223ENST00000474643 CARNMT1Q8N4J0 409 aa15.69■□□□□ 0.1
VARS-223ENST00000474643 MINDY1Q8N5J2 469 aa15.69■□□□□ 0.1
VARS-223ENST00000474643 GANCQ8TET4 914 aa15.69■□□□□ 0.1
VARS-223ENST00000474643 NUP58Q9BVL2 599 aa15.69■□□□□ 0.1
VARS-223ENST00000474643 NAA15Q9BXJ9 866 aaKnown RBP15.69■□□□□ 0.1
VARS-223ENST00000474643 LHX5Q9H2C1 402 aa15.69■□□□□ 0.1
VARS-223ENST00000474643 SYNCQ9H7C4 482 aa15.69■□□□□ 0.1
VARS-223ENST00000474643 CD93Q9NPY3 652 aa15.69■□□□□ 0.1
VARS-223ENST00000474643 TJP2Q9UDY2 1190 aa15.69■□□□□ 0.1
VARS-223ENST00000474643 SLC12A6Q9UHW9 1150 aa15.69■□□□□ 0.1
VARS-223ENST00000474643 SIK3Q9Y2K2 1263 aa15.69■□□□□ 0.1
VARS-223ENST00000474643 ACACBO00763 2458 aa15.69■□□□□ 0.1
VARS-223ENST00000474643 MOCS3O95396 460 aa15.68■□□□□ 0.1
VARS-223ENST00000474643 DNTTP04053 509 aa15.68■□□□□ 0.1
VARS-223ENST00000474643 STAT1P42224 750 aa15.68■□□□□ 0.1
VARS-223ENST00000474643 TPMTP51580 245 aa15.68■□□□□ 0.1
VARS-223ENST00000474643 SNX16P57768 344 aa15.68■□□□□ 0.1
VARS-223ENST00000474643 RING1Q06587 406 aa15.68■□□□□ 0.1
VARS-223ENST00000474643 MEA1Q16626 185 aa15.68■□□□□ 0.1
VARS-223ENST00000474643 TTC31Q49AM3 519 aaPredicted RBP15.68■□□□□ 0.1
VARS-223ENST00000474643 TAF3Q5VWG9 929 aa15.68■□□□□ 0.1
VARS-223ENST00000474643 MBLAC2Q68D91 279 aa15.68■□□□□ 0.1
VARS-223ENST00000474643 DPY19L2P1Q6NXN4 242 aa15.68■□□□□ 0.1
VARS-223ENST00000474643 APTXQ7Z2E3 356 aaKnown RBP15.68■□□□□ 0.1
VARS-223ENST00000474643 METTL3Q86U44 580 aaKnown RBP15.68■□□□□ 0.1
VARS-223ENST00000474643 ZCCHC9Q8N567 271 aaKnown RBP15.68■□□□□ 0.1
VARS-223ENST00000474643 ZNF366Q8N895 744 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms