RNA–Protein interactions for RNA: ENST00000473829.1

PTCD3-210, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-210ENST00000473829 ADAM22Q9P0K1 906 aa19.61■□□□□ 0.73
PTCD3-210ENST00000473829 SMG5Q9UPR3 1016 aaKnown RBP19.61■□□□□ 0.73
PTCD3-210ENST00000473829 CCDC163A0A0D9SF12 145 aa19.6■□□□□ 0.73
PTCD3-210ENST00000473829 A0A1W2PQF6 199 aa19.6■□□□□ 0.73
PTCD3-210ENST00000473829 WASH3PC4AMC7 463 aa19.6■□□□□ 0.73
PTCD3-210ENST00000473829 AXIN1O15169 862 aa19.6■□□□□ 0.73
PTCD3-210ENST00000473829 CCDC172P0C7W6 258 aa19.6■□□□□ 0.73
PTCD3-210ENST00000473829 SLC2A3P11169 496 aa19.6■□□□□ 0.73
PTCD3-210ENST00000473829 ABCB4P21439 1286 aa19.6■□□□□ 0.73
PTCD3-210ENST00000473829 NTSR1P30989 418 aa19.6■□□□□ 0.73
PTCD3-210ENST00000473829 CD70P32970 193 aa19.6■□□□□ 0.73
PTCD3-210ENST00000473829 PRKCIP41743 596 aa19.6■□□□□ 0.73
PTCD3-210ENST00000473829 CXCR3P49682 368 aa19.6■□□□□ 0.73
PTCD3-210ENST00000473829 DEUP1Q05D60 604 aa19.6■□□□□ 0.73
PTCD3-210ENST00000473829 TRMT11Q7Z4G4 463 aaKnown RBP19.6■□□□□ 0.73
PTCD3-210ENST00000473829 KIAA0907Q7Z7F0 614 aaPredicted RBP19.6■□□□□ 0.73
PTCD3-210ENST00000473829 RASSF3Q86WH2 238 aa19.6■□□□□ 0.73
PTCD3-210ENST00000473829 CIR1Q86X95 450 aaPredicted RBP19.6■□□□□ 0.73
PTCD3-210ENST00000473829 CHPFQ8IZ52 775 aa19.6■□□□□ 0.73
PTCD3-210ENST00000473829 DDX51Q8N8A6 666 aaKnown RBP eCLIP19.6■□□□□ 0.73
PTCD3-210ENST00000473829 LMLNQ96KR4 655 aa19.6■□□□□ 0.73
PTCD3-210ENST00000473829 TPSD1Q9BZJ3 242 aa19.6■□□□□ 0.73
PTCD3-210ENST00000473829 CD248Q9HCU0 757 aa19.6■□□□□ 0.73
PTCD3-210ENST00000473829 TMPRSS4Q9NRS4 437 aa19.6■□□□□ 0.73
PTCD3-210ENST00000473829 ARHGEF38Q9NXL2 777 aa19.6■□□□□ 0.73
PTCD3-210ENST00000473829 EBF1Q9UH73 591 aa19.6■□□□□ 0.73
PTCD3-210ENST00000473829 GGA2Q9UJY4 613 aa19.6■□□□□ 0.73
PTCD3-210ENST00000473829 RAD54BQ9Y620 910 aa19.6■□□□□ 0.73
PTCD3-210ENST00000473829 WDR87Q6ZQQ6 2873 aa19.6■□□□□ 0.73
PTCD3-210ENST00000473829 OTOGLQ3ZCN5 2332 aa19.59■□□□□ 0.73
PTCD3-210ENST00000473829 A0A1W2PQJ5 194 aa19.59■□□□□ 0.73
PTCD3-210ENST00000473829 TCRBV5S1A1TA0A578 114 aa19.59■□□□□ 0.73
PTCD3-210ENST00000473829 PAGE1O75459 146 aa19.59■□□□□ 0.73
PTCD3-210ENST00000473829 PABPC1P11940 636 aaKnown RBP19.59■□□□□ 0.73
PTCD3-210ENST00000473829 SKILP12757 684 aa19.59■□□□□ 0.73
PTCD3-210ENST00000473829 HOXB2P14652 356 aa19.59■□□□□ 0.73
PTCD3-210ENST00000473829 IRAK1P51617 712 aa19.59■□□□□ 0.73
PTCD3-210ENST00000473829 DGKEP52429 567 aa19.59■□□□□ 0.73
PTCD3-210ENST00000473829 LPAL2Q16609 132 aa19.59■□□□□ 0.73
PTCD3-210ENST00000473829 FSCBQ5H9T9 825 aa19.59■□□□□ 0.73
PTCD3-210ENST00000473829 ACAD10Q6JQN1 1059 aa19.59■□□□□ 0.73
PTCD3-210ENST00000473829 KIAA1211LQ6NV74 962 aa19.59■□□□□ 0.73
PTCD3-210ENST00000473829 ADIPOR2Q86V24 386 aa19.59■□□□□ 0.73
PTCD3-210ENST00000473829 DNAAF5Q86Y56 855 aa19.59■□□□□ 0.73
PTCD3-210ENST00000473829 MFN1Q8IWA4 741 aa19.59■□□□□ 0.73
PTCD3-210ENST00000473829 GABRG3Q99928 467 aa19.59■□□□□ 0.73
PTCD3-210ENST00000473829 CIPCQ9C0C6 399 aa19.59■□□□□ 0.73
PTCD3-210ENST00000473829 TKTL2Q9H0I9 626 aa19.59■□□□□ 0.73
PTCD3-210ENST00000473829 ELOVL2Q9NXB9 296 aa19.59■□□□□ 0.73
PTCD3-210ENST00000473829 THAP10Q9P2Z0 257 aaPredicted RBP19.59■□□□□ 0.73
PTCD3-210ENST00000473829 SNX10Q9Y5X0 201 aa19.59■□□□□ 0.73
PTCD3-210ENST00000473829 HS3ST4Q9Y661 456 aa19.59■□□□□ 0.73
PTCD3-210ENST00000473829 CKAP5Q14008 2032 aa19.58■□□□□ 0.73
PTCD3-210ENST00000473829 TCRBV21S2A2A0A5A6 115 aa19.58■□□□□ 0.72
PTCD3-210ENST00000473829 C2CD4BA6NLJ0 364 aa19.58■□□□□ 0.72
PTCD3-210ENST00000473829 F5H5T6 163 aa19.58■□□□□ 0.72
PTCD3-210ENST00000473829 LUC7L3O95232 432 aaKnown RBP19.58■□□□□ 0.72
PTCD3-210ENST00000473829 GYPCP04921 128 aa19.58■□□□□ 0.72
PTCD3-210ENST00000473829 CALB1P05937 261 aa19.58■□□□□ 0.72
PTCD3-210ENST00000473829 TNFAIP3P21580 790 aa19.58■□□□□ 0.72
PTCD3-210ENST00000473829 IL12RB1P42701 662 aa19.58■□□□□ 0.72
PTCD3-210ENST00000473829 ATP11AP98196 1134 aa19.58■□□□□ 0.72
PTCD3-210ENST00000473829 C1QBPQ07021 282 aaKnown RBP19.58■□□□□ 0.72
PTCD3-210ENST00000473829 LMAN2Q12907 356 aa19.58■□□□□ 0.72
PTCD3-210ENST00000473829 ZNF234Q14588 700 aa19.58■□□□□ 0.72
PTCD3-210ENST00000473829 EIF4HQ15056 248 aaKnown RBP19.58■□□□□ 0.72
PTCD3-210ENST00000473829 C15orf59Q2T9L4 293 aaPredicted RBP19.58■□□□□ 0.72
PTCD3-210ENST00000473829 FUT11Q495W5 492 aa19.58■□□□□ 0.72
PTCD3-210ENST00000473829 CCDC14Q49A88 953 aa19.58■□□□□ 0.72
PTCD3-210ENST00000473829 BRMS1LQ5PSV4 323 aa19.58■□□□□ 0.72
PTCD3-210ENST00000473829 SH3PXD2AQ5TCZ1 1133 aa19.58■□□□□ 0.72
PTCD3-210ENST00000473829 FBXL22Q6P050 247 aa19.58■□□□□ 0.72
PTCD3-210ENST00000473829 CHST9Q7L1S5 443 aa19.58■□□□□ 0.72
PTCD3-210ENST00000473829 C14orf80Q86SX3 495 aa19.58■□□□□ 0.72
PTCD3-210ENST00000473829 MCOLN2Q8IZK6 566 aa19.58■□□□□ 0.72
PTCD3-210ENST00000473829 CARNMT1Q8N4J0 409 aa19.58■□□□□ 0.72
PTCD3-210ENST00000473829 C3orf20Q8ND61 904 aa19.58■□□□□ 0.72
PTCD3-210ENST00000473829 FIBINQ8TAL6 211 aa19.58■□□□□ 0.72
PTCD3-210ENST00000473829 GAB3Q8WWW8 586 aa19.58■□□□□ 0.72
PTCD3-210ENST00000473829 RXFP2Q8WXD0 754 aa19.58■□□□□ 0.72
PTCD3-210ENST00000473829 IGSF8Q969P0 613 aa19.58■□□□□ 0.72
PTCD3-210ENST00000473829 NUP58Q9BVL2 599 aa19.58■□□□□ 0.72
PTCD3-210ENST00000473829 SLC12A6Q9UHW9 1150 aa19.58■□□□□ 0.72
PTCD3-210ENST00000473829 STON1Q9Y6Q2 735 aa19.58■□□□□ 0.72
PTCD3-210ENST00000473829 CFAP54Q96N23 3096 aa19.57■□□□□ 0.72
PTCD3-210ENST00000473829 TYW5A2RUC4 315 aaKnown RBP19.57■□□□□ 0.72
PTCD3-210ENST00000473829 TMCO5BA8MYB1 307 aa19.57■□□□□ 0.72
PTCD3-210ENST00000473829 DDX3XO00571 662 aaKnown RBP eCLIP19.57■□□□□ 0.726e-15■■■■□ 25.2
PTCD3-210ENST00000473829 RPP40O75818 363 aaKnown RBP19.57■□□□□ 0.72
PTCD3-210ENST00000473829 CNR2P34972 360 aa19.57■□□□□ 0.72
PTCD3-210ENST00000473829 RDXP35241 583 aaKnown RBP19.57■□□□□ 0.72
PTCD3-210ENST00000473829 RFC1P35251 1148 aaPredicted RBP19.57■□□□□ 0.72
PTCD3-210ENST00000473829 KLHL30Q0D2K2 578 aa19.57■□□□□ 0.72
PTCD3-210ENST00000473829 MAPK8IP2Q13387 824 aaPredicted RBP19.57■□□□□ 0.72
PTCD3-210ENST00000473829 ENPP2Q13822 863 aa19.57■□□□□ 0.72
PTCD3-210ENST00000473829 AUHQ13825 339 aaKnown RBP19.57■□□□□ 0.72
PTCD3-210ENST00000473829 SIM2Q14190 667 aaPredicted RBP19.57■□□□□ 0.72
PTCD3-210ENST00000473829 ARTNQ5T4W7 220 aa19.57■□□□□ 0.72
PTCD3-210ENST00000473829 HGSNATQ68CP4 663 aa19.57■□□□□ 0.72
PTCD3-210ENST00000473829 PRR23BQ6ZRT6 265 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms