RNA–Protein interactions for RNA: ENST00000473714.1

CALD1-216, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 230 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-216ENST00000473714 TET1Q8NFU7 2136 aa2.64□□□□□ -1.99
CALD1-216ENST00000473714 OR14K1Q8NGZ2 314 aa2.64□□□□□ -1.99
CALD1-216ENST00000473714 MAP4K1Q92918 833 aa2.64□□□□□ -1.99
CALD1-216ENST00000473714 LPPQ93052 612 aa2.64□□□□□ -1.99
CALD1-216ENST00000473714 SKA1Q96BD8 255 aa2.64□□□□□ -1.99
CALD1-216ENST00000473714 SLC7A6OSQ96CW6 309 aaPredicted RBP2.64□□□□□ -1.99
CALD1-216ENST00000473714 EDC3Q96F86 508 aaKnown RBP2.64□□□□□ -1.99
CALD1-216ENST00000473714 ZC3H10Q96K80 434 aaKnown RBP2.64□□□□□ -1.99
CALD1-216ENST00000473714 PHACTR3Q96KR7 559 aa2.64□□□□□ -1.99
CALD1-216ENST00000473714 MRGPRX4Q96LA9 322 aa2.64□□□□□ -1.99
CALD1-216ENST00000473714 TGS1Q96RS0 853 aaKnown RBP2.64□□□□□ -1.99
CALD1-216ENST00000473714 RMDN3Q96TC7 470 aa2.64□□□□□ -1.99
CALD1-216ENST00000473714 ISCA1Q9BUE6 129 aa2.64□□□□□ -1.99
CALD1-216ENST00000473714 COLEC11Q9BWP8 271 aa2.64□□□□□ -1.99
CALD1-216ENST00000473714 TTLL2Q9BWV7 592 aa2.64□□□□□ -1.99
CALD1-216ENST00000473714 PHF7Q9BWX1 381 aaPredicted RBP2.64□□□□□ -1.99
CALD1-216ENST00000473714 SORBS1Q9BX66 1292 aaKnown RBP2.64□□□□□ -1.99
CALD1-216ENST00000473714 COA1Q9GZY4 146 aa2.64□□□□□ -1.99
CALD1-216ENST00000473714 C12orf65Q9H3J6 166 aaKnown RBP2.64□□□□□ -1.99
CALD1-216ENST00000473714 SEPSECSQ9HD40 501 aaKnown RBP2.64□□□□□ -1.99
CALD1-216ENST00000473714 OBP2BQ9NPH6 170 aa2.64□□□□□ -1.99
CALD1-216ENST00000473714 A1CFQ9NQ94 594 aaKnown RBP2.64□□□□□ -1.99
CALD1-216ENST00000473714 KCND1Q9NSA2 647 aa2.64□□□□□ -1.99
CALD1-216ENST00000473714 SMC4Q9NTJ3 1288 aa2.64□□□□□ -1.99
CALD1-216ENST00000473714 GJB4Q9NTQ9 266 aa2.64□□□□□ -1.99
CALD1-216ENST00000473714 SIDT1Q9NXL6 827 aaKnown RBP2.64□□□□□ -1.99
CALD1-216ENST00000473714 FLRT1Q9NZU1 646 aa2.64□□□□□ -1.99
CALD1-216ENST00000473714 ZNF70Q9UC06 446 aaPredicted RBP2.64□□□□□ -1.99
CALD1-216ENST00000473714 CD207Q9UJ71 328 aa2.64□□□□□ -1.99
CALD1-216ENST00000473714 ZNF112Q9UJU3 913 aa2.64□□□□□ -1.99
CALD1-216ENST00000473714 FBXO2Q9UK22 296 aaPredicted RBP2.64□□□□□ -1.99
CALD1-216ENST00000473714 ZDHHC8Q9ULC8 765 aa2.64□□□□□ -1.99
CALD1-216ENST00000473714 OAZ3Q9UMX2 235 aa2.64□□□□□ -1.99
CALD1-216ENST00000473714 AGTPBP1Q9UPW5 1226 aa2.64□□□□□ -1.99
CALD1-216ENST00000473714 SIK3Q9Y2K2 1263 aa2.64□□□□□ -1.99
CALD1-216ENST00000473714 CFAP46Q8IYW2 2715 aa2.64□□□□□ -1.99
CALD1-216ENST00000473714 MAPK8IP3Q9UPT6 1336 aa2.64□□□□□ -1.99
CALD1-216ENST00000473714 CACNA1IQ9P0X4 2223 aa2.64□□□□□ -1.99
CALD1-216ENST00000473714 ZNF236Q9UL36 1845 aa2.63□□□□□ -1.99
CALD1-216ENST00000473714 MED23Q9ULK4 1368 aa2.63□□□□□ -1.99
CALD1-216ENST00000473714 ITPR1Q14643 2758 aa2.63□□□□□ -1.99
CALD1-216ENST00000473714 ZFHX3Q15911 3703 aa2.63□□□□□ -1.99
CALD1-216ENST00000473714 GOLGA6L3A6NEY3 463 aa2.63□□□□□ -1.99
CALD1-216ENST00000473714 ZNF785A8K8V0 405 aa2.63□□□□□ -1.99
CALD1-216ENST00000473714 LGALS16A8MUM7 142 aa2.63□□□□□ -1.99
CALD1-216ENST00000473714 PYCARD-AS1I3L0S3 204 aa2.63□□□□□ -1.99
CALD1-216ENST00000473714 M0R3H8 397 aa2.63□□□□□ -1.99
CALD1-216ENST00000473714 RAB27BO00194 218 aa2.63□□□□□ -1.99
CALD1-216ENST00000473714 EIF3FO00303 357 aaPredicted RBP2.63□□□□□ -1.99
CALD1-216ENST00000473714 TRIM38O00635 465 aa2.63□□□□□ -1.99
CALD1-216ENST00000473714 PIP5K1BO14986 540 aa2.63□□□□□ -1.99
CALD1-216ENST00000473714 RGS10O43665 173 aa2.63□□□□□ -1.99
CALD1-216ENST00000473714 PLA2G6O60733 806 aa2.63□□□□□ -1.99
CALD1-216ENST00000473714 UNC5CO95185 931 aa2.63□□□□□ -1.99
CALD1-216ENST00000473714 KNG1P01042 644 aa2.63□□□□□ -1.99
CALD1-216ENST00000473714 POMCP01189 267 aa2.63□□□□□ -1.99
CALD1-216ENST00000473714 MT-ND5P03915 603 aa2.63□□□□□ -1.99
CALD1-216ENST00000473714 GRPP07492 148 aa2.63□□□□□ -1.99
CALD1-216ENST00000473714 VSIG10L2P0DP72 767 aa2.63□□□□□ -1.99
CALD1-216ENST00000473714 RARBP10826 455 aa2.63□□□□□ -1.99
CALD1-216ENST00000473714 XRCC6P12956 609 aaKnown RBP eCLIP2.63□□□□□ -1.99
CALD1-216ENST00000473714 GP1BBP13224 206 aa2.63□□□□□ -1.99
CALD1-216ENST00000473714 ZNF37AP17032 561 aaPredicted RBP2.63□□□□□ -1.99
CALD1-216ENST00000473714 FPR1P21462 350 aa2.63□□□□□ -1.99
CALD1-216ENST00000473714 PCSK1P29120 753 aa2.63□□□□□ -1.99
CALD1-216ENST00000473714 MAPK4P31152 587 aa2.63□□□□□ -1.99
CALD1-216ENST00000473714 CYP2C18P33260 490 aa2.63□□□□□ -1.99
CALD1-216ENST00000473714 ETV4P43268 484 aa2.63□□□□□ -1.99
CALD1-216ENST00000473714 ALDH1A3P47895 512 aa2.63□□□□□ -1.99
CALD1-216ENST00000473714 FOXD4Q12950 439 aaPredicted RBP2.63□□□□□ -1.99
CALD1-216ENST00000473714 G3BP1Q13283 466 aaKnown RBP eCLIP2.63□□□□□ -1.99
CALD1-216ENST00000473714 SP140Q13342 867 aa2.63□□□□□ -1.99
CALD1-216ENST00000473714 CTBP1Q13363 440 aa2.63□□□□□ -1.99
CALD1-216ENST00000473714 MTM1Q13496 603 aa2.63□□□□□ -1.99
CALD1-216ENST00000473714 PDE1CQ14123 709 aaPredicted RBP2.63□□□□□ -1.99
CALD1-216ENST00000473714 SLC29A2Q14542 456 aa2.63□□□□□ -1.99
CALD1-216ENST00000473714 PCOLCEQ15113 449 aa2.63□□□□□ -1.99
CALD1-216ENST00000473714 CCDC6Q16204 474 aa2.63□□□□□ -1.99
CALD1-216ENST00000473714 TUBB8Q3ZCM7 444 aa2.63□□□□□ -1.99
CALD1-216ENST00000473714 ZMAT1Q5H9K5 638 aa2.63□□□□□ -1.99
CALD1-216ENST00000473714 COLEC12Q5KU26 742 aa2.63□□□□□ -1.99
CALD1-216ENST00000473714 PRAMEF14Q5SWL7 426 aa2.63□□□□□ -1.99
CALD1-216ENST00000473714 AFMIDQ63HM1 303 aa2.63□□□□□ -1.99
CALD1-216ENST00000473714 FAAH2Q6GMR7 532 aa2.63□□□□□ -1.99
CALD1-216ENST00000473714 KLHL17Q6TDP4 642 aa2.63□□□□□ -1.99
CALD1-216ENST00000473714 LAYNQ6UX15 382 aa2.63□□□□□ -1.99
CALD1-216ENST00000473714 GPR142Q7Z601 462 aa2.63□□□□□ -1.99
CALD1-216ENST00000473714 CLEC14AQ86T13 490 aa2.63□□□□□ -1.99
CALD1-216ENST00000473714 SGMS1Q86VZ5 419 aa2.63□□□□□ -1.99
CALD1-216ENST00000473714 TTC30AQ86WT1 665 aa2.63□□□□□ -1.99
CALD1-216ENST00000473714 PRIMA1Q86XR5 153 aa2.63□□□□□ -1.99
CALD1-216ENST00000473714 GATAD2AQ86YP4 633 aa2.63□□□□□ -1.99
CALD1-216ENST00000473714 HERC6Q8IVU3 1022 aa2.63□□□□□ -1.99
CALD1-216ENST00000473714 REXO1L1PQ8IX06 675 aa2.63□□□□□ -1.99
CALD1-216ENST00000473714 TRMT2AQ8IZ69 625 aaKnown RBP2.63□□□□□ -1.99
CALD1-216ENST00000473714 GALNT15Q8N3T1 639 aa2.63□□□□□ -1.99
CALD1-216ENST00000473714 ZNF843Q8N446 348 aa2.63□□□□□ -1.99
CALD1-216ENST00000473714 PDILTQ8N807 584 aa2.63□□□□□ -1.99
CALD1-216ENST00000473714 NAXEQ8NCW5 288 aa2.63□□□□□ -1.99
CALD1-216ENST00000473714 IL17REQ8NFR9 667 aa2.63□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms