RNA–Protein interactions for RNA: ENST00000473542.1

BBX-223, Transcript of BBX, HMG-box containing, human

TSL 3

Gene BBX, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BBX-223	ENST00000473542	TRMT61A	Q96FX7	289 aa	Known RBP	5.23	□□□□□ -1.57
BBX-223	ENST00000473542	KAZALD1	Q96I82	304 aa		5.23	□□□□□ -1.57
BBX-223	ENST00000473542	IFT80	Q9P2H3	777 aa	Predicted RBP	5.23	□□□□□ -1.57
BBX-223	ENST00000473542	ARHGEF17	Q96PE2	2063 aa	Predicted RBP	5.22	□□□□□ -1.57
BBX-223	ENST00000473542		M0QYT0	321 aa		5.22	□□□□□ -1.57
BBX-223	ENST00000473542	HEXIM1	O94992	359 aa	Known RBP	5.22	□□□□□ -1.57
BBX-223	ENST00000473542	C1R	P00736	705 aa		5.22	□□□□□ -1.57
BBX-223	ENST00000473542	EBLN1	P0CF75	366 aa		5.22	□□□□□ -1.57
BBX-223	ENST00000473542	ELF1	P32519	619 aa		5.22	□□□□□ -1.57
BBX-223	ENST00000473542	PNPLA4	P41247	253 aa		5.22	□□□□□ -1.57
BBX-223	ENST00000473542	RNASE12	Q5GAN4	147 aa	Known RBP	5.22	□□□□□ -1.57
BBX-223	ENST00000473542	ANO7	Q6IWH7	933 aa		5.22	□□□□□ -1.57
BBX-223	ENST00000473542	KIRREL2	Q6UWL6	708 aa		5.22	□□□□□ -1.57
BBX-223	ENST00000473542	LAS2	Q8IYD9	372 aa		5.22	□□□□□ -1.57
BBX-223	ENST00000473542	FAM98A	Q8NCA5	519 aa	Known RBP	5.22	□□□□□ -1.57
BBX-223	ENST00000473542	SKA1	Q96BD8	255 aa		5.22	□□□□□ -1.57
BBX-223	ENST00000473542	SENP7	Q9BQF6	1050 aa		5.22	□□□□□ -1.57
BBX-223	ENST00000473542	ABHD10	Q9NUJ1	306 aa		5.22	□□□□□ -1.57
BBX-223	ENST00000473542	TFCP2L1	Q9NZI6	479 aa		5.22	□□□□□ -1.57
BBX-223	ENST00000473542	TRPC5	Q9UL62	973 aa	Predicted RBP	5.22	□□□□□ -1.57
BBX-223	ENST00000473542	SLC12A4	Q9UP95	1085 aa		5.22	□□□□□ -1.57
BBX-223	ENST00000473542	COL11A2	P13942	1736 aa	Predicted RBP	5.22	□□□□□ -1.57
BBX-223	ENST00000473542	VWA3A	A6NCI4	1184 aa		5.21	□□□□□ -1.58
BBX-223	ENST00000473542	TTC34	A8MYJ7	566 aa		5.21	□□□□□ -1.58
BBX-223	ENST00000473542		H7C1Q1	480 aa		5.21	□□□□□ -1.58
BBX-223	ENST00000473542	PRAMEF2	O60811	474 aa		5.21	□□□□□ -1.58
BBX-223	ENST00000473542	ALDOA	P04075	364 aa	Known RBP	5.21	□□□□□ -1.58
BBX-223	ENST00000473542	ELFN1	P0C7U0	828 aa		5.21	□□□□□ -1.58
BBX-223	ENST00000473542	APEH	P13798	732 aa	Known RBP	5.21	□□□□□ -1.58
BBX-223	ENST00000473542	CHN1	P15882	459 aa		5.21	□□□□□ -1.58
BBX-223	ENST00000473542	WT1	P19544	449 aa	Predicted RBP	5.21	□□□□□ -1.58
BBX-223	ENST00000473542	DRD4	P21917	467 aa		5.21	□□□□□ -1.58
BBX-223	ENST00000473542	GALNS	P34059	522 aa		5.21	□□□□□ -1.58
BBX-223	ENST00000473542	RARRES1	P49788	294 aa		5.21	□□□□□ -1.58
BBX-223	ENST00000473542	RCAN1	P53805	252 aa		5.21	□□□□□ -1.58
BBX-223	ENST00000473542	TAS2R50	P59544	299 aa		5.21	□□□□□ -1.58
BBX-223	ENST00000473542	RAE1	P78406	368 aa	Known RBP	5.21	□□□□□ -1.58
BBX-223	ENST00000473542	MPP1	Q00013	466 aa		5.21	□□□□□ -1.58
BBX-223	ENST00000473542	G3BP1	Q13283	466 aa	Known RBP eCLIP	5.21	□□□□□ -1.58
BBX-223	ENST00000473542	DLGAP5	Q15398	846 aa		5.21	□□□□□ -1.58
BBX-223	ENST00000473542	SLC4A8	Q2Y0W8	1093 aa		5.21	□□□□□ -1.58
BBX-223	ENST00000473542	PCID2	Q5JVF3	399 aa		5.21	□□□□□ -1.58
BBX-223	ENST00000473542	ZNF484	Q5JVG2	852 aa		5.21	□□□□□ -1.58
BBX-223	ENST00000473542	WDR45B	Q5MNZ6	344 aa		5.21	□□□□□ -1.58
BBX-223	ENST00000473542	CBWD5	Q5RIA9	395 aa		5.21	□□□□□ -1.58
BBX-223	ENST00000473542	ATG16L1	Q676U5	607 aa		5.21	□□□□□ -1.58
BBX-223	ENST00000473542	DENND1B	Q6P3S1	775 aa		5.21	□□□□□ -1.58
BBX-223	ENST00000473542	PCYOX1L	Q8NBM8	494 aa		5.21	□□□□□ -1.58
BBX-223	ENST00000473542	ADPRHL1	Q8NDY3	354 aa		5.21	□□□□□ -1.58
BBX-223	ENST00000473542	SRFBP1	Q8NEF9	429 aa	Known RBP	5.21	□□□□□ -1.58
BBX-223	ENST00000473542	PRR11	Q96HE9	360 aa	Predicted RBP	5.21	□□□□□ -1.58
BBX-223	ENST00000473542	PPP1R10	Q96QC0	940 aa	Known RBP	5.21	□□□□□ -1.58
BBX-223	ENST00000473542	TIMP4	Q99727	224 aa		5.21	□□□□□ -1.58
BBX-223	ENST00000473542	PLEKHA2	Q9HB19	425 aa		5.21	□□□□□ -1.58
BBX-223	ENST00000473542	USP29	Q9HBJ7	922 aa		5.21	□□□□□ -1.58
BBX-223	ENST00000473542	ALG13	Q9NP73	1137 aa	Known RBP	5.21	□□□□□ -1.58
BBX-223	ENST00000473542	AFG3L2	Q9Y4W6	797 aa		5.21	□□□□□ -1.58
BBX-223	ENST00000473542	PCDHB2	Q9Y5E7	798 aa		5.21	□□□□□ -1.58
BBX-223	ENST00000473542	PCDHA10	Q9Y5I2	948 aa		5.21	□□□□□ -1.58
BBX-223	ENST00000473542	ENTPD2	Q9Y5L3	495 aa		5.21	□□□□□ -1.58
BBX-223	ENST00000473542		A6NLC8	198 aa		5.2	□□□□□ -1.58
BBX-223	ENST00000473542	BTBD19	C9JJ37	291 aa		5.2	□□□□□ -1.58
BBX-223	ENST00000473542	STX16-NPEPL1	H3BU86	382 aa		5.2	□□□□□ -1.58
BBX-223	ENST00000473542	STX16	O14662	325 aa		5.2	□□□□□ -1.58
BBX-223	ENST00000473542	MT-CO3	P00414	261 aa		5.2	□□□□□ -1.58
BBX-223	ENST00000473542	PSMC2	P35998	433 aa	Known RBP	5.2	□□□□□ -1.58
BBX-223	ENST00000473542	PDCL	Q13371	301 aa		5.2	□□□□□ -1.58
BBX-223	ENST00000473542	THOC5	Q13769	683 aa	Known RBP	5.2	□□□□□ -1.58
BBX-223	ENST00000473542	SIM2	Q14190	667 aa	Predicted RBP	5.2	□□□□□ -1.58
BBX-223	ENST00000473542	FAM153C	Q494X1	144 aa		5.2	□□□□□ -1.58
BBX-223	ENST00000473542	CEP85	Q6P2H3	762 aa		5.2	□□□□□ -1.58
BBX-223	ENST00000473542	SLC29A4	Q7RTT9	530 aa		5.2	□□□□□ -1.58
BBX-223	ENST00000473542	BCDIN3D	Q7Z5W3	292 aa	Known RBP	5.2	□□□□□ -1.58
BBX-223	ENST00000473542	TERB1	Q8NA31	727 aa		5.2	□□□□□ -1.58
BBX-223	ENST00000473542	SLC26A6	Q9BXS9	759 aa		5.2	□□□□□ -1.58
BBX-223	ENST00000473542	GPR63	Q9BZJ6	419 aa		5.2	□□□□□ -1.58
BBX-223	ENST00000473542	RAB21	Q9UL25	225 aa		5.2	□□□□□ -1.58
BBX-223	ENST00000473542	TBX20	Q9UMR3	447 aa		5.2	□□□□□ -1.58
BBX-223	ENST00000473542	COPG1	Q9Y678	874 aa	Known RBP	5.2	□□□□□ -1.58
BBX-223	ENST00000473542	ITIH6	Q6UXX5	1313 aa		5.2	□□□□□ -1.58
BBX-223	ENST00000473542	ZNF213	O14771	459 aa		5.19	□□□□□ -1.58
BBX-223	ENST00000473542	SFPQ	P23246	707 aa	Known RBP eCLIP	5.19	□□□□□ -1.58
BBX-223	ENST00000473542	FPR3	P25089	353 aa		5.19	□□□□□ -1.58
BBX-223	ENST00000473542	SLC8A1	P32418	973 aa		5.19	□□□□□ -1.58
BBX-223	ENST00000473542	KRT9	P35527	623 aa		5.19	□□□□□ -1.58
BBX-223	ENST00000473542	CASP2	P42575	452 aa		5.19	□□□□□ -1.58
BBX-223	ENST00000473542	LIFR	P42702	1097 aa		5.19	□□□□□ -1.58
BBX-223	ENST00000473542	RXRG	P48443	463 aa		5.19	□□□□□ -1.58
BBX-223	ENST00000473542	WDR5	P61964	334 aa	Known RBP	5.19	□□□□□ -1.58
BBX-223	ENST00000473542	SIM1	P81133	766 aa	Predicted RBP	5.19	□□□□□ -1.58
BBX-223	ENST00000473542	RNASEL	Q05823	741 aa	Known RBP	5.19	□□□□□ -1.58
BBX-223	ENST00000473542	TBL3	Q12788	808 aa	Known RBP	5.19	□□□□□ -1.58
BBX-223	ENST00000473542	GLE1	Q53GS7	698 aa	Known RBP	5.19	□□□□□ -1.58
BBX-223	ENST00000473542	HYI	Q5T013	277 aa		5.19	□□□□□ -1.58
BBX-223	ENST00000473542	KYAT3	Q6YP21	454 aa	Known RBP	5.19	□□□□□ -1.58
BBX-223	ENST00000473542	SLC39A5	Q6ZMH5	540 aa		5.19	□□□□□ -1.58
BBX-223	ENST00000473542	LRRC8D	Q7L1W4	858 aa		5.19	□□□□□ -1.58
BBX-223	ENST00000473542	RSRC2	Q7L4I2	434 aa	Known RBP	5.19	□□□□□ -1.58
BBX-223	ENST00000473542	ZSCAN2	Q7Z7L9	614 aa	Predicted RBP	5.19	□□□□□ -1.58
BBX-223	ENST00000473542	PCGF5	Q86SE9	256 aa		5.19	□□□□□ -1.58

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