RNA–Protein interactions for RNA: ENST00000472024.2

CHMP2B-204, Transcript of charged multivesicular body protein 2B, humanhuman

TSL 5

Gene CHMP2B, Length 836 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-204ENST00000472024 ATAT1Q5SQI0 421 aa20.07■□□□□ 0.8
CHMP2B-204ENST00000472024 ADGRF1Q5T601 910 aa20.07■□□□□ 0.8
CHMP2B-204ENST00000472024 DRICH1Q6PGQ1 229 aaPredicted RBP20.07■□□□□ 0.8
CHMP2B-204ENST00000472024 PLD5Q8N7P1 536 aa20.07■□□□□ 0.8
CHMP2B-204ENST00000472024 PRELID2Q8N945 189 aa20.07■□□□□ 0.8
CHMP2B-204ENST00000472024 SMRP1Q8NCR6 262 aa20.07■□□□□ 0.8
CHMP2B-204ENST00000472024 USP13Q92995 863 aaPredicted RBP20.07■□□□□ 0.8
CHMP2B-204ENST00000472024 TBC1D31Q96DN5 1066 aa20.07■□□□□ 0.8
CHMP2B-204ENST00000472024 DDX50Q9BQ39 737 aaKnown RBP20.07■□□□□ 0.8
CHMP2B-204ENST00000472024 HOMER3Q9NSC5 361 aa20.07■□□□□ 0.8
CHMP2B-204ENST00000472024 AGO1Q9UL18 857 aaKnown RBP20.07■□□□□ 0.8
CHMP2B-204ENST00000472024 E9PAM4 449 aa20.06■□□□□ 0.8
CHMP2B-204ENST00000472024 LEFTY2O00292 366 aa20.06■□□□□ 0.8
CHMP2B-204ENST00000472024 CST8O60676 142 aa20.06■□□□□ 0.8
CHMP2B-204ENST00000472024 MOCS2O96007 188 aaPredicted RBP20.06■□□□□ 0.8
CHMP2B-204ENST00000472024 TACR2P21452 398 aa20.06■□□□□ 0.8
CHMP2B-204ENST00000472024 MTHFRP42898 656 aa20.06■□□□□ 0.8
CHMP2B-204ENST00000472024 TPI1P60174 286 aa20.06■□□□□ 0.8
CHMP2B-204ENST00000472024 ZNF77Q15935 545 aa20.06■□□□□ 0.8
CHMP2B-204ENST00000472024 RNF43Q68DV7 783 aa20.06■□□□□ 0.8
CHMP2B-204ENST00000472024 CES5AQ6NT32 575 aa20.06■□□□□ 0.8
CHMP2B-204ENST00000472024 C14orf80Q86SX3 495 aa20.06■□□□□ 0.8
CHMP2B-204ENST00000472024 CPXM2Q8N436 756 aa20.06■□□□□ 0.8
CHMP2B-204ENST00000472024 TTC13Q8NBP0 860 aa20.06■□□□□ 0.8
CHMP2B-204ENST00000472024 SUSD6Q92537 303 aa20.06■□□□□ 0.8
CHMP2B-204ENST00000472024 RIPOR3Q96MK2 946 aa20.06■□□□□ 0.8
CHMP2B-204ENST00000472024 ZSWIM3Q96MP5 696 aa20.06■□□□□ 0.8
CHMP2B-204ENST00000472024 CARD6Q9BX69 1037 aa20.06■□□□□ 0.8
CHMP2B-204ENST00000472024 HEMGNQ9BXL5 484 aa20.06■□□□□ 0.8
CHMP2B-204ENST00000472024 LRRC19Q9H756 370 aa20.06■□□□□ 0.8
CHMP2B-204ENST00000472024 TDP1Q9NUW8 608 aa20.06■□□□□ 0.8
CHMP2B-204ENST00000472024 SMPD4Q9NXE4 827 aa20.06■□□□□ 0.8
CHMP2B-204ENST00000472024 CLDND1Q9NY35 253 aa20.06■□□□□ 0.8
CHMP2B-204ENST00000472024 OBP2AQ9NY56 170 aa20.06■□□□□ 0.8
CHMP2B-204ENST00000472024 ZNF212Q9UDV6 495 aa20.06■□□□□ 0.8
CHMP2B-204ENST00000472024 LSM7Q9UK45 103 aaKnown RBP20.06■□□□□ 0.8
CHMP2B-204ENST00000472024 NR2E1Q9Y466 385 aa20.06■□□□□ 0.8
CHMP2B-204ENST00000472024 SNX10Q9Y5X0 201 aa20.06■□□□□ 0.8
CHMP2B-204ENST00000472024 RAD54BQ9Y620 910 aa20.06■□□□□ 0.8
CHMP2B-204ENST00000472024 BRWD1Q9NSI6 2320 aa20.05■□□□□ 0.8
CHMP2B-204ENST00000472024 GOLGA6L10A0A0M3HER8 536 aa20.05■□□□□ 0.8
CHMP2B-204ENST00000472024 CTAGE15A4D2H0 777 aa20.05■□□□□ 0.8
CHMP2B-204ENST00000472024 KRIT1O00522 736 aa20.05■□□□□ 0.8
CHMP2B-204ENST00000472024 APOL1O14791 398 aa20.05■□□□□ 0.8
CHMP2B-204ENST00000472024 SLU7O95391 586 aaKnown RBP20.05■□□□□ 0.8
CHMP2B-204ENST00000472024 PRAMEF12O95522 483 aa20.05■□□□□ 0.8
CHMP2B-204ENST00000472024 CTAGE8P0CG41 777 aa20.05■□□□□ 0.8
CHMP2B-204ENST00000472024 NR2C2P49116 596 aa20.05■□□□□ 0.8
CHMP2B-204ENST00000472024 CCNG2Q16589 344 aa20.05■□□□□ 0.8
CHMP2B-204ENST00000472024 NCBP2-AS2Q69YL0 99 aa20.05■□□□□ 0.8
CHMP2B-204ENST00000472024 FBXL22Q6P050 247 aa20.05■□□□□ 0.8
CHMP2B-204ENST00000472024 CTAGE6Q86UF2 777 aa20.05■□□□□ 0.8
CHMP2B-204ENST00000472024 NLRP14Q86W24 1093 aa20.05■□□□□ 0.8
CHMP2B-204ENST00000472024 RFX6Q8HWS3 928 aa20.05■□□□□ 0.8
CHMP2B-204ENST00000472024 DENND1CQ8IV53 801 aa20.05■□□□□ 0.8
CHMP2B-204ENST00000472024 CTAGE4Q8IX94 777 aa20.05■□□□□ 0.8
CHMP2B-204ENST00000472024 MICALL1Q8N3F8 863 aa20.05■□□□□ 0.8
CHMP2B-204ENST00000472024 FGF13Q92913 245 aa20.05■□□□□ 0.8
CHMP2B-204ENST00000472024 NECTIN4Q96NY8 510 aa20.05■□□□□ 0.8
CHMP2B-204ENST00000472024 MAK16Q9BXY0 300 aaKnown RBP20.05■□□□□ 0.8
CHMP2B-204ENST00000472024 ZFP37Q9Y6Q3 630 aaPredicted RBP20.05■□□□□ 0.8
CHMP2B-204ENST00000472024 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.04■□□□□ 0.8
CHMP2B-204ENST00000472024 RIOK3O14730 519 aaKnown RBP20.04■□□□□ 0.8
CHMP2B-204ENST00000472024 CREB3O43889 395 aa20.04■□□□□ 0.8
CHMP2B-204ENST00000472024 RHOQP17081 205 aa20.04■□□□□ 0.8
CHMP2B-204ENST00000472024 ERCC2P18074 760 aa20.04■□□□□ 0.8
CHMP2B-204ENST00000472024 IGFBP4P22692 258 aa20.04■□□□□ 0.8
CHMP2B-204ENST00000472024 SLC6A4P31645 630 aa20.04■□□□□ 0.8
CHMP2B-204ENST00000472024 TUBB4BP68371 445 aa20.04■□□□□ 0.8
CHMP2B-204ENST00000472024 TTC39BQ5VTQ0 682 aaPredicted RBP20.04■□□□□ 0.8
CHMP2B-204ENST00000472024 RAP1GAP2Q684P5 730 aa20.04■□□□□ 0.8
CHMP2B-204ENST00000472024 LRRC31Q6UY01 552 aa20.04■□□□□ 0.8
CHMP2B-204ENST00000472024 ARID3BQ8IVW6 561 aaPredicted RBP20.04■□□□□ 0.8
CHMP2B-204ENST00000472024 MMGT1Q8N4V1 131 aa20.04■□□□□ 0.8
CHMP2B-204ENST00000472024 SLC35B2Q8TB61 432 aa20.04■□□□□ 0.8
CHMP2B-204ENST00000472024 SH3RF2Q8TEC5 729 aa20.04■□□□□ 0.8
CHMP2B-204ENST00000472024 NKD2Q969F2 451 aaPredicted RBP20.04■□□□□ 0.8
CHMP2B-204ENST00000472024 ASB16Q96NS5 453 aa20.04■□□□□ 0.8
CHMP2B-204ENST00000472024 KLC2Q9H0B6 622 aa20.04■□□□□ 0.8
CHMP2B-204ENST00000472024 SIK2Q9H0K1 926 aa20.04■□□□□ 0.8
CHMP2B-204ENST00000472024 CATSPERBQ9H7T0 1116 aa20.04■□□□□ 0.8
CHMP2B-204ENST00000472024 RBM12Q9NTZ6 932 aaKnown RBP20.04■□□□□ 0.8
CHMP2B-204ENST00000472024 DONSONQ9NYP3 566 aa20.04■□□□□ 0.8
CHMP2B-204ENST00000472024 CFAP97Q9P2B7 532 aa20.04■□□□□ 0.8
CHMP2B-204ENST00000472024 CDH7Q9ULB5 785 aa20.04■□□□□ 0.8
CHMP2B-204ENST00000472024 CCL26Q9Y258 94 aa20.04■□□□□ 0.8
CHMP2B-204ENST00000472024 DOCK4Q8N1I0 1966 aa20.04■□□□□ 0.8
CHMP2B-204ENST00000472024 DOCK8Q8NF50 2099 aa20.03■□□□□ 0.8
CHMP2B-204ENST00000472024 F5H5T6 163 aa20.03■□□□□ 0.8
CHMP2B-204ENST00000472024 PHF2O75151 1096 aa20.03■□□□□ 0.8
CHMP2B-204ENST00000472024 AMPD1P23109 780 aa20.03■□□□□ 0.8
CHMP2B-204ENST00000472024 EPHB2P29323 1055 aa20.03■□□□□ 0.8
CHMP2B-204ENST00000472024 FNTAP49354 379 aa20.03■□□□□ 0.8
CHMP2B-204ENST00000472024 NOMO1Q15155 1222 aa20.03■□□□□ 0.8
CHMP2B-204ENST00000472024 AFMIDQ63HM1 303 aa20.03■□□□□ 0.8
CHMP2B-204ENST00000472024 KAZNQ674X7 775 aa20.03■□□□□ 0.8
CHMP2B-204ENST00000472024 CHSY1Q86X52 802 aa20.03■□□□□ 0.8
CHMP2B-204ENST00000472024 LZTR1Q8N653 840 aa20.03■□□□□ 0.8
CHMP2B-204ENST00000472024 CELF5Q8N6W0 485 aaKnown RBP20.03■□□□□ 0.8
CHMP2B-204ENST00000472024 RTL3Q8N8U3 475 aaKnown RBP20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms