RNA–Protein interactions for RNA: ENST00000471307.6

CCDC39-202, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-202ENST00000471307 ZNF84P51523 738 aa6.35□□□□□ -1.39
CCDC39-202ENST00000471307 PMS2P11Q13670 270 aa6.35□□□□□ -1.39
CCDC39-202ENST00000471307 CBFBQ13951 182 aa6.35□□□□□ -1.39
CCDC39-202ENST00000471307 SLC35G1Q2M3R5 365 aa6.35□□□□□ -1.39
CCDC39-202ENST00000471307 LEXMQ3ZCV2 418 aa6.35□□□□□ -1.39
CCDC39-202ENST00000471307 FAM209BQ5JX69 171 aa6.35□□□□□ -1.39
CCDC39-202ENST00000471307 ARL6IP4Q66PJ3 421 aaKnown RBP6.35□□□□□ -1.39
CCDC39-202ENST00000471307 KYAT3Q6YP21 454 aaKnown RBP6.35□□□□□ -1.39
CCDC39-202ENST00000471307 LAS2Q8IYD9 372 aa6.35□□□□□ -1.39
CCDC39-202ENST00000471307 MMP21Q8N119 569 aa6.35□□□□□ -1.39
CCDC39-202ENST00000471307 OR2C3Q8N628 320 aa6.35□□□□□ -1.39
CCDC39-202ENST00000471307 KAT2BQ92831 832 aa6.35□□□□□ -1.39
CCDC39-202ENST00000471307 TTLL2Q9BWV7 592 aa6.35□□□□□ -1.39
CCDC39-202ENST00000471307 TRIM2Q9C040 744 aa6.35□□□□□ -1.39
CCDC39-202ENST00000471307 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.35□□□□□ -1.39
CCDC39-202ENST00000471307 EBF3Q9H4W6 596 aa6.35□□□□□ -1.39
CCDC39-202ENST00000471307 TM7SF3Q9NS93 570 aa6.35□□□□□ -1.39
CCDC39-202ENST00000471307 UBE2J1Q9Y385 318 aaPredicted RBP6.35□□□□□ -1.39
CCDC39-202ENST00000471307 PREX2Q70Z35 1606 aa6.35□□□□□ -1.39
CCDC39-202ENST00000471307 ARHGAP5Q13017 1502 aa6.35□□□□□ -1.39
CCDC39-202ENST00000471307 PLEKHH2Q8IVE3 1493 aa6.34□□□□□ -1.39
CCDC39-202ENST00000471307 KIAA1107Q9UPP5 1409 aa6.34□□□□□ -1.39
CCDC39-202ENST00000471307 EMSYQ7Z589 1322 aa6.34□□□□□ -1.39
CCDC39-202ENST00000471307 FAM234BA2RU67 622 aa6.34□□□□□ -1.39
CCDC39-202ENST00000471307 DHHO43323 396 aa6.34□□□□□ -1.39
CCDC39-202ENST00000471307 TLX3O43711 291 aaPredicted RBP6.34□□□□□ -1.39
CCDC39-202ENST00000471307 GLP2RO95838 553 aa6.34□□□□□ -1.39
CCDC39-202ENST00000471307 TOMM40O96008 361 aa6.34□□□□□ -1.39
CCDC39-202ENST00000471307 SNHG28P0DPA3 235 aa6.34□□□□□ -1.39
CCDC39-202ENST00000471307 HARSP12081 509 aaKnown RBP6.34□□□□□ -1.39
CCDC39-202ENST00000471307 ST6GAL1P15907 406 aa6.34□□□□□ -1.39
CCDC39-202ENST00000471307 EEF1GP26641 437 aaKnown RBP6.34□□□□□ -1.39
CCDC39-202ENST00000471307 SOX2P48431 317 aa6.34□□□□□ -1.39
CCDC39-202ENST00000471307 DMWDQ09019 674 aa6.34□□□□□ -1.39
CCDC39-202ENST00000471307 GAB1Q13480 694 aa6.34□□□□□ -1.39
CCDC39-202ENST00000471307 RAPGEF1Q13905 1077 aa6.34□□□□□ -1.39
CCDC39-202ENST00000471307 CSHL1Q14406 222 aa6.34□□□□□ -1.39
CCDC39-202ENST00000471307 ELF2Q15723 593 aa6.34□□□□□ -1.39
CCDC39-202ENST00000471307 ARHGAP15Q53QZ3 475 aa6.34□□□□□ -1.39
CCDC39-202ENST00000471307 CCDC181Q5TID7 509 aa6.34□□□□□ -1.39
CCDC39-202ENST00000471307 FBXO38Q6PIJ6 1188 aa6.34□□□□□ -1.39
CCDC39-202ENST00000471307 RASGRP3Q8IV61 690 aa6.34□□□□□ -1.39
CCDC39-202ENST00000471307 SAMD14Q8IZD0 417 aaPredicted RBP6.34□□□□□ -1.39
CCDC39-202ENST00000471307 PAAF1Q9BRP4 392 aa6.34□□□□□ -1.39
CCDC39-202ENST00000471307 SCNM1Q9BWG6 230 aa6.34□□□□□ -1.39
CCDC39-202ENST00000471307 SEMA4BQ9NPR2 832 aaPredicted RBP6.34□□□□□ -1.39
CCDC39-202ENST00000471307 CAMSAP2Q08AD1 1489 aa6.34□□□□□ -1.4
CCDC39-202ENST00000471307 TTC3P53804 2025 aa6.33□□□□□ -1.4
CCDC39-202ENST00000471307 CAND2O75155 1236 aa6.33□□□□□ -1.4
CCDC39-202ENST00000471307 TSPY4P0CV99 314 aa6.33□□□□□ -1.4
CCDC39-202ENST00000471307 TSPY10P0CW01 314 aa6.33□□□□□ -1.4
CCDC39-202ENST00000471307 SRGAP2BP0DMP2 458 aa6.33□□□□□ -1.4
CCDC39-202ENST00000471307 PSG1P11464 419 aa6.33□□□□□ -1.4
CCDC39-202ENST00000471307 AKR1A1P14550 325 aa6.33□□□□□ -1.4
CCDC39-202ENST00000471307 GNALP38405 381 aa6.33□□□□□ -1.4
CCDC39-202ENST00000471307 IL6STP40189 918 aaPredicted RBP6.33□□□□□ -1.4
CCDC39-202ENST00000471307 IZUMO3Q5VZ72 239 aa6.33□□□□□ -1.4
CCDC39-202ENST00000471307 BHLHA9Q7RTU4 235 aa6.33□□□□□ -1.4
CCDC39-202ENST00000471307 KRT27Q7Z3Y8 459 aa6.33□□□□□ -1.4
CCDC39-202ENST00000471307 ZNF548Q8NEK5 533 aaPredicted RBP6.33□□□□□ -1.4
CCDC39-202ENST00000471307 ZNF566Q969W8 418 aa6.33□□□□□ -1.4
CCDC39-202ENST00000471307 RIPOR3Q96MK2 946 aa6.33□□□□□ -1.4
CCDC39-202ENST00000471307 KCNK9Q9NPC2 374 aa6.33□□□□□ -1.4
CCDC39-202ENST00000471307 FBXO28Q9NVF7 368 aa6.33□□□□□ -1.4
CCDC39-202ENST00000471307 AGO2Q9UKV8 859 aaKnown RBP6.33□□□□□ -1.4
CCDC39-202ENST00000471307 DTNAQ9Y4J8 743 aa6.33□□□□□ -1.4
CCDC39-202ENST00000471307 FANCAO15360 1455 aa6.33□□□□□ -1.4
CCDC39-202ENST00000471307 MAP3K4Q9Y6R4 1608 aa6.32□□□□□ -1.4
CCDC39-202ENST00000471307 DIP2BQ9P265 1576 aa6.32□□□□□ -1.4
CCDC39-202ENST00000471307 CD8B2A6NJW9 211 aa6.32□□□□□ -1.4
CCDC39-202ENST00000471307 NPC1O15118 1278 aa6.32□□□□□ -1.4
CCDC39-202ENST00000471307 PRPF4O43172 522 aaKnown RBP eCLIP6.32□□□□□ -1.4
CCDC39-202ENST00000471307 NBPF7P0C2Y1 421 aaPredicted RBP6.32□□□□□ -1.4
CCDC39-202ENST00000471307 ALADP13716 330 aa6.32□□□□□ -1.4
CCDC39-202ENST00000471307 STAT6P42226 847 aa6.32□□□□□ -1.4
CCDC39-202ENST00000471307 ALDH7A1P49419 539 aaKnown RBP6.32□□□□□ -1.4
CCDC39-202ENST00000471307 AGTR2P50052 363 aa6.32□□□□□ -1.4
CCDC39-202ENST00000471307 LINC00205P59089 165 aa6.32□□□□□ -1.4
CCDC39-202ENST00000471307 P3H1Q32P28 736 aa6.32□□□□□ -1.4
CCDC39-202ENST00000471307 COLCA1Q6ZS62 124 aa6.32□□□□□ -1.4
CCDC39-202ENST00000471307 ZDHHC17Q8IUH5 632 aa6.32□□□□□ -1.4
CCDC39-202ENST00000471307 SLC44A5Q8NCS7 719 aa6.32□□□□□ -1.4
CCDC39-202ENST00000471307 ZFPM2Q8WW38 1151 aa6.32□□□□□ -1.4
CCDC39-202ENST00000471307 FAR2Q96K12 515 aa6.32□□□□□ -1.4
CCDC39-202ENST00000471307 MOV10Q9HCE1 1003 aaKnown RBP6.32□□□□□ -1.4
CCDC39-202ENST00000471307 CEP83Q9Y592 693 aa6.32□□□□□ -1.4
CCDC39-202ENST00000471307 PCDHB7Q9Y5E2 793 aa6.32□□□□□ -1.4
CCDC39-202ENST00000471307 NEO1Q92859 1461 aa6.32□□□□□ -1.4
CCDC39-202ENST00000471307 ABCC5O15440 1437 aa6.32□□□□□ -1.4
CCDC39-202ENST00000471307 AKNAQ7Z591 1439 aa6.32□□□□□ -1.4
CCDC39-202ENST00000471307 SAMD9LQ8IVG5 1584 aa6.31□□□□□ -1.4
CCDC39-202ENST00000471307 MBD5Q9P267 1494 aa6.31□□□□□ -1.4
CCDC39-202ENST00000471307 TRBV5-3A0A0A0MS03 114 aa6.31□□□□□ -1.4
CCDC39-202ENST00000471307 PODXLO00592 558 aa6.31□□□□□ -1.4
CCDC39-202ENST00000471307 NCK2O43639 380 aa6.31□□□□□ -1.4
CCDC39-202ENST00000471307 NTSR2O95665 410 aa6.31□□□□□ -1.4
CCDC39-202ENST00000471307 HOXB6P17509 224 aaKnown RBP6.31□□□□□ -1.4
CCDC39-202ENST00000471307 AK2P54819 239 aa6.31□□□□□ -1.4
CCDC39-202ENST00000471307 LONRF1Q17RB8 773 aa6.31□□□□□ -1.4
CCDC39-202ENST00000471307 HSP90AB2PQ58FF8 381 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms