RNA–Protein interactions for RNA: ENST00000470191.5

CCDC171-204, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-204ENST00000470191 AFMP43652 599 aa9.51□□□□□ -0.89
CCDC171-204ENST00000470191 HARS2P49590 506 aaKnown RBP9.51□□□□□ -0.89
CCDC171-204ENST00000470191 AP3M2P53677 418 aa9.51□□□□□ -0.89
CCDC171-204ENST00000470191 AMPD3Q01432 767 aa9.51□□□□□ -0.89
CCDC171-204ENST00000470191 ZBTB16Q05516 673 aa9.51□□□□□ -0.89
CCDC171-204ENST00000470191 KCNJ12Q14500 433 aa9.51□□□□□ -0.89
CCDC171-204ENST00000470191 SLC39A14Q15043 492 aa9.51□□□□□ -0.89
CCDC171-204ENST00000470191 STK38Q15208 465 aa9.51□□□□□ -0.89
CCDC171-204ENST00000470191 KNOP1Q1ED39 458 aaKnown RBP9.51□□□□□ -0.89
CCDC171-204ENST00000470191 TBC1D25Q3MII6 688 aa9.51□□□□□ -0.89
CCDC171-204ENST00000470191 CEP135Q66GS9 1140 aa9.51□□□□□ -0.89
CCDC171-204ENST00000470191 RFWD3Q6PCD5 774 aa9.51□□□□□ -0.89
CCDC171-204ENST00000470191 ADIPOR2Q86V24 386 aa9.51□□□□□ -0.89
CCDC171-204ENST00000470191 ERICH1Q86X53 443 aa9.51□□□□□ -0.89
CCDC171-204ENST00000470191 MMAAQ8IVH4 418 aaKnown RBP9.51□□□□□ -0.89
CCDC171-204ENST00000470191 WFIKKN2Q8TEU8 576 aa9.51□□□□□ -0.89
CCDC171-204ENST00000470191 EDEM1Q92611 657 aa9.51□□□□□ -0.89
CCDC171-204ENST00000470191 PLD4Q96BZ4 506 aa9.51□□□□□ -0.89
CCDC171-204ENST00000470191 SERAC1Q96JX3 654 aa9.51□□□□□ -0.89
CCDC171-204ENST00000470191 HEXIM2Q96MH2 286 aaKnown RBP9.51□□□□□ -0.89
CCDC171-204ENST00000470191 DUSP16Q9BY84 665 aa9.51□□□□□ -0.89
CCDC171-204ENST00000470191 PABPC3Q9H361 631 aaKnown RBP9.51□□□□□ -0.89
CCDC171-204ENST00000470191 CLMPQ9H6B4 373 aa9.51□□□□□ -0.89
CCDC171-204ENST00000470191 KBTBD4Q9NVX7 518 aa9.51□□□□□ -0.89
CCDC171-204ENST00000470191 WDR70Q9NW82 654 aa9.51□□□□□ -0.89
CCDC171-204ENST00000470191 PPP4R2Q9NY27 417 aa9.51□□□□□ -0.89
CCDC171-204ENST00000470191 SUN2Q9UH99 717 aa9.51□□□□□ -0.89
CCDC171-204ENST00000470191 PCDHB1Q9Y5F3 818 aa9.51□□□□□ -0.89
CCDC171-204ENST00000470191 PTPRQQ9UMZ3 2332 aa9.5□□□□□ -0.89
CCDC171-204ENST00000470191 ATMQ13315 3056 aa9.5□□□□□ -0.89
CCDC171-204ENST00000470191 ZNF462Q96JM2 2506 aa9.5□□□□□ -0.89
CCDC171-204ENST00000470191 CFAP46Q8IYW2 2715 aa9.5□□□□□ -0.89
CCDC171-204ENST00000470191 GOLGA6L7A0A1B0GV03 622 aa9.5□□□□□ -0.89
CCDC171-204ENST00000470191 LRRC72A6NJI9 287 aa9.5□□□□□ -0.89
CCDC171-204ENST00000470191 ERVH48-1M5A8F1 160 aa9.5□□□□□ -0.89
CCDC171-204ENST00000470191 MSI1O43347 362 aaKnown RBP9.5□□□□□ -0.89
CCDC171-204ENST00000470191 SLC28A2O43868 658 aa9.5□□□□□ -0.89
CCDC171-204ENST00000470191 RNASEH1O60930 286 aaKnown RBP9.5□□□□□ -0.89
CCDC171-204ENST00000470191 ASS1P00966 412 aaKnown RBP9.5□□□□□ -0.89
CCDC171-204ENST00000470191 MPOP05164 745 aa9.5□□□□□ -0.89
CCDC171-204ENST00000470191 ATP5BP06576 529 aaKnown RBP9.5□□□□□ -0.89
CCDC171-204ENST00000470191 DLDP09622 509 aaKnown RBP9.5□□□□□ -0.89
CCDC171-204ENST00000470191 CDK4P11802 303 aa9.5□□□□□ -0.89
CCDC171-204ENST00000470191 CKMT2P17540 419 aa9.5□□□□□ -0.89
CCDC171-204ENST00000470191 MAT2AP31153 395 aaKnown RBP9.5□□□□□ -0.89
CCDC171-204ENST00000470191 PSMD8P48556 350 aa9.5□□□□□ -0.89
CCDC171-204ENST00000470191 ARRB1P49407 418 aaPredicted RBP9.5□□□□□ -0.89
CCDC171-204ENST00000470191 TKTL1P51854 596 aa9.5□□□□□ -0.89
CCDC171-204ENST00000470191 TMPRSS3P57727 454 aa9.5□□□□□ -0.89
CCDC171-204ENST00000470191 ST8SIA6P61647 398 aa9.5□□□□□ -0.89
CCDC171-204ENST00000470191 SNRPFP62306 86 aaKnown RBP9.5□□□□□ -0.89
CCDC171-204ENST00000470191 DAB2P98082 770 aa9.5□□□□□ -0.89
CCDC171-204ENST00000470191 INSM1Q01101 510 aaPredicted RBP9.5□□□□□ -0.89
CCDC171-204ENST00000470191 KCNC4Q03721 635 aa9.5□□□□□ -0.89
CCDC171-204ENST00000470191 CST6Q15828 149 aa9.5□□□□□ -0.89
CCDC171-204ENST00000470191 E2F4Q16254 413 aa9.5□□□□□ -0.89
CCDC171-204ENST00000470191 ZACNQ401N2 412 aa9.5□□□□□ -0.89
CCDC171-204ENST00000470191 UNC13DQ70J99 1090 aa9.5□□□□□ -0.89
CCDC171-204ENST00000470191 SV2AQ7L0J3 742 aa9.5□□□□□ -0.89
CCDC171-204ENST00000470191 TMC6Q7Z403 805 aa9.5□□□□□ -0.89
CCDC171-204ENST00000470191 GRAMD1CQ8IYS0 662 aa9.5□□□□□ -0.89
CCDC171-204ENST00000470191 AHI1Q8N157 1196 aa9.5□□□□□ -0.89
CCDC171-204ENST00000470191 ARHGAP18Q8N392 663 aa9.5□□□□□ -0.89
CCDC171-204ENST00000470191 ZNF276Q8N554 614 aa9.5□□□□□ -0.89
CCDC171-204ENST00000470191 ZNF248Q8NDW4 579 aa9.5□□□□□ -0.89
CCDC171-204ENST00000470191 OR2T34Q8NGX1 318 aa9.5□□□□□ -0.89
CCDC171-204ENST00000470191 OR14C36Q8NHC7 312 aa9.5□□□□□ -0.89
CCDC171-204ENST00000470191 RNF139Q8WU17 664 aa9.5□□□□□ -0.89
CCDC171-204ENST00000470191 TSC1Q92574 1164 aa9.5□□□□□ -0.89
CCDC171-204ENST00000470191 TAF4BQ92750 862 aa9.5□□□□□ -0.89
CCDC171-204ENST00000470191 GOLGA1Q92805 767 aa9.5□□□□□ -0.89
CCDC171-204ENST00000470191 ULBP1Q9BZM6 244 aa9.5□□□□□ -0.89
CCDC171-204ENST00000470191 IMPG2Q9BZV3 1241 aa9.5□□□□□ -0.89
CCDC171-204ENST00000470191 RSPH9Q9H1X1 276 aaPredicted RBP9.5□□□□□ -0.89
CCDC171-204ENST00000470191 FBRSQ9HAH7 460 aa9.5□□□□□ -0.89
CCDC171-204ENST00000470191 APOBEC3GQ9HC16 384 aaKnown RBP9.5□□□□□ -0.89
CCDC171-204ENST00000470191 PNPLA8Q9NP80 782 aa9.5□□□□□ -0.89
CCDC171-204ENST00000470191 USP3Q9Y6I4 520 aa9.5□□□□□ -0.89
CCDC171-204ENST00000470191 MGAQ8IWI9 3026 aa9.49□□□□□ -0.89
CCDC171-204ENST00000470191 TBC1D3DA0A087WVF3 549 aa9.49□□□□□ -0.89
CCDC171-204ENST00000470191 TBC1D3IA0A087WXS9 549 aa9.49□□□□□ -0.89
CCDC171-204ENST00000470191 TBC1D3EA0A087X179 549 aa9.49□□□□□ -0.89
CCDC171-204ENST00000470191 TBC1D3KA0A087X1G2 549 aa9.49□□□□□ -0.89
CCDC171-204ENST00000470191 A0A1W2PR77 199 aa9.49□□□□□ -0.89
CCDC171-204ENST00000470191 TBC1D3FA6NER0 549 aaPredicted RBP9.49□□□□□ -0.89
CCDC171-204ENST00000470191 CAPN8A6NHC0 703 aa9.49□□□□□ -0.89
CCDC171-204ENST00000470191 TTC34A8MYJ7 566 aa9.49□□□□□ -0.89
CCDC171-204ENST00000470191 TBC1D3LB9A6J9 549 aa9.49□□□□□ -0.89
CCDC171-204ENST00000470191 TLR4O00206 839 aa9.49□□□□□ -0.89
CCDC171-204ENST00000470191 TULP2O00295 520 aa9.49□□□□□ -0.89
CCDC171-204ENST00000470191 KLK10O43240 276 aa9.49□□□□□ -0.89
CCDC171-204ENST00000470191 MT-CO3P00414 261 aa9.49□□□□□ -0.89
CCDC171-204ENST00000470191 RPN1P04843 607 aaKnown RBP9.49□□□□□ -0.89
CCDC171-204ENST00000470191 TBC1D3HP0C7X1 549 aa9.49□□□□□ -0.89
CCDC171-204ENST00000470191 TRIM49P0CI25 452 aa9.49□□□□□ -0.89
CCDC171-204ENST00000470191 TRIM49CP0CI26 452 aa9.49□□□□□ -0.89
CCDC171-204ENST00000470191 MYF5P13349 255 aa9.49□□□□□ -0.89
CCDC171-204ENST00000470191 SLC8A1P32418 973 aa9.49□□□□□ -0.89
CCDC171-204ENST00000470191 GCLMP48507 274 aa9.49□□□□□ -0.89
CCDC171-204ENST00000470191 PCBP4P57723 403 aaKnown RBP9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms