RNA–Protein interactions for RNA: ENST00000469415.1

MCF2L-221, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 3,027 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-221ENST00000469415 FZD10Q9ULW2 581 aa18.35■□□□□ 0.53
MCF2L-221ENST00000469415 PTPN4P29074 926 aa18.34■□□□□ 0.53
MCF2L-221ENST00000469415 CDK16Q00536 496 aa18.34■□□□□ 0.53
MCF2L-221ENST00000469415 RIPK1Q13546 671 aa18.34■□□□□ 0.53
MCF2L-221ENST00000469415 PEX6Q13608 980 aa18.34■□□□□ 0.53
MCF2L-221ENST00000469415 CTC1Q2NKJ3 1217 aa18.34■□□□□ 0.53
MCF2L-221ENST00000469415 SLC25A52Q3SY17 297 aa18.34■□□□□ 0.53
MCF2L-221ENST00000469415 FASTKD1Q53R41 847 aaKnown RBP18.34■□□□□ 0.53
MCF2L-221ENST00000469415 PDE4DIPQ5VU43 2346 aa18.34■□□□□ 0.53
MCF2L-221ENST00000469415 RASSF3Q86WH2 238 aa18.34■□□□□ 0.53
MCF2L-221ENST00000469415 CRYBG2Q8N1P7 616 aa18.34■□□□□ 0.53
MCF2L-221ENST00000469415 C3orf58Q8NDZ4 430 aa18.34■□□□□ 0.53
MCF2L-221ENST00000469415 SHKBP1Q8TBC3 707 aa18.34■□□□□ 0.53
MCF2L-221ENST00000469415 CRTAC1Q9NQ79 661 aa18.34■□□□□ 0.53
MCF2L-221ENST00000469415 F8W810 466 aa18.34■□□□□ 0.53
MCF2L-221ENST00000469415 GCATO75600 419 aa18.34■□□□□ 0.53
MCF2L-221ENST00000469415 F2P00734 622 aa18.34■□□□□ 0.53
MCF2L-221ENST00000469415 PDHA1P08559 390 aa18.34■□□□□ 0.53
MCF2L-221ENST00000469415 TYK2P29597 1187 aa18.34■□□□□ 0.53
MCF2L-221ENST00000469415 CCDC15Q0P6D6 951 aa18.34■□□□□ 0.53
MCF2L-221ENST00000469415 TAF11Q15544 211 aa18.34■□□□□ 0.53
MCF2L-221ENST00000469415 CERCAMQ5T4B2 595 aa18.34■□□□□ 0.53
MCF2L-221ENST00000469415 ALKAL1Q6UXT8 129 aa18.34■□□□□ 0.53
MCF2L-221ENST00000469415 NSL1Q96IY1 281 aa18.34■□□□□ 0.53
MCF2L-221ENST00000469415 RSRC1Q96IZ7 334 aaKnown RBP18.34■□□□□ 0.53
MCF2L-221ENST00000469415 ZNF570Q96NI8 536 aa18.34■□□□□ 0.53
MCF2L-221ENST00000469415 DUSP16Q9BY84 665 aa18.34■□□□□ 0.53
MCF2L-221ENST00000469415 TSPYL2Q9H2G4 693 aaPredicted RBP18.34■□□□□ 0.53
MCF2L-221ENST00000469415 RBM47A0AV96 593 aaKnown RBP18.33■□□□□ 0.53
MCF2L-221ENST00000469415 SDR42E2A6NKP2 422 aa18.33■□□□□ 0.53
MCF2L-221ENST00000469415 SMAPO00193 183 aa18.33■□□□□ 0.53
MCF2L-221ENST00000469415 PEX11AO75192 247 aa18.33■□□□□ 0.53
MCF2L-221ENST00000469415 RASSF2P50749 326 aa18.33■□□□□ 0.53
MCF2L-221ENST00000469415 CACNB2Q08289 660 aaPredicted RBP18.33■□□□□ 0.53
MCF2L-221ENST00000469415 STX3Q13277 289 aa18.33■□□□□ 0.53
MCF2L-221ENST00000469415 SV2CQ496J9 727 aa18.33■□□□□ 0.53
MCF2L-221ENST00000469415 HSP90AA5PQ58FG0 334 aa18.33■□□□□ 0.53
MCF2L-221ENST00000469415 OTUD1Q5VV17 481 aaPredicted RBP18.33■□□□□ 0.53
MCF2L-221ENST00000469415 ZC3H15Q8WU90 426 aaKnown RBP18.33■□□□□ 0.53
MCF2L-221ENST00000469415 MFSD3Q96ES6 412 aa18.33■□□□□ 0.53
MCF2L-221ENST00000469415 PCED1BQ96HM7 432 aa18.33■□□□□ 0.53
MCF2L-221ENST00000469415 AP5M1Q9H0R1 490 aa18.33■□□□□ 0.53
MCF2L-221ENST00000469415 XPNPEP3Q9NQH7 507 aa18.33■□□□□ 0.53
MCF2L-221ENST00000469415 TAS2R1Q9NYW7 299 aa18.33■□□□□ 0.53
MCF2L-221ENST00000469415 PCDHA11Q9Y5I1 949 aa18.33■□□□□ 0.53
MCF2L-221ENST00000469415 DCAF8L1A6NGE4 600 aa18.33■□□□□ 0.52
MCF2L-221ENST00000469415 SPAG6O75602 509 aa18.33■□□□□ 0.52
MCF2L-221ENST00000469415 KRT36O76013 467 aa18.33■□□□□ 0.52
MCF2L-221ENST00000469415 DHRS4L1P0CG22 281 aa18.33■□□□□ 0.52
MCF2L-221ENST00000469415 PRKCHP24723 683 aa18.33■□□□□ 0.52
MCF2L-221ENST00000469415 TPI1P60174 286 aa18.33■□□□□ 0.52
MCF2L-221ENST00000469415 SARNPP82979 210 aaKnown RBP18.33■□□□□ 0.52
MCF2L-221ENST00000469415 HSF5Q4G112 596 aaPredicted RBP18.33■□□□□ 0.52
MCF2L-221ENST00000469415 GNASQ5JWF2 1037 aa18.33■□□□□ 0.52
MCF2L-221ENST00000469415 WDR60Q8WVS4 1066 aa18.33■□□□□ 0.52
MCF2L-221ENST00000469415 EMID1Q96A84 441 aaPredicted RBP18.33■□□□□ 0.52
MCF2L-221ENST00000469415 FAM161BQ96MY7 647 aa18.33■□□□□ 0.52
MCF2L-221ENST00000469415 ATXN3LQ9H3M9 355 aa18.33■□□□□ 0.52
MCF2L-221ENST00000469415 LOC100653049A0A140TA62 436 aa18.33■□□□□ 0.52
MCF2L-221ENST00000469415 KRT34O76011 436 aa18.33■□□□□ 0.52
MCF2L-221ENST00000469415 ALDOAP04075 364 aaKnown RBP18.33■□□□□ 0.52
MCF2L-221ENST00000469415 FAM200BP0CF97 657 aa18.33■□□□□ 0.52
MCF2L-221ENST00000469415 BRCC3P46736 316 aa18.33■□□□□ 0.52
MCF2L-221ENST00000469415 CRLF3Q8IUI8 442 aa18.33■□□□□ 0.52
MCF2L-221ENST00000469415 NPWQ8N729 165 aa18.33■□□□□ 0.52
MCF2L-221ENST00000469415 HIPK4Q8NE63 616 aa18.33■□□□□ 0.52
MCF2L-221ENST00000469415 FETUBQ9UGM5 382 aa18.33■□□□□ 0.52
MCF2L-221ENST00000469415 DNAJC16Q9Y2G8 782 aa18.33■□□□□ 0.52
MCF2L-221ENST00000469415 SMIM35A0A1B0GVV1 85 aa18.32■□□□□ 0.52
MCF2L-221ENST00000469415 GLTPD2A6NH11 291 aa18.32■□□□□ 0.52
MCF2L-221ENST00000469415 STK10O94804 968 aaKnown RBP18.32■□□□□ 0.52
MCF2L-221ENST00000469415 STAU1O95793 577 aaKnown RBP18.32■□□□□ 0.52
MCF2L-221ENST00000469415 WASHC5Q12768 1159 aa18.32■□□□□ 0.52
MCF2L-221ENST00000469415 CRYMQ14894 314 aa18.32■□□□□ 0.52
MCF2L-221ENST00000469415 WNT8BQ93098 351 aa18.32■□□□□ 0.52
MCF2L-221ENST00000469415 RTP4Q96DX8 246 aa18.32■□□□□ 0.52
MCF2L-221ENST00000469415 FCRL3Q96P31 734 aaPredicted RBP18.32■□□□□ 0.52
MCF2L-221ENST00000469415 PARK7Q99497 189 aaKnown RBP18.32■□□□□ 0.52
MCF2L-221ENST00000469415 SSU72Q9NP77 194 aaKnown RBP18.32■□□□□ 0.52
MCF2L-221ENST00000469415 MAN1C1Q9NR34 630 aa18.32■□□□□ 0.52
MCF2L-221ENST00000469415 SUFUQ9UMX1 484 aa18.32■□□□□ 0.52
MCF2L-221ENST00000469415 C17orf102A2RUQ5 167 aa18.32■□□□□ 0.52
MCF2L-221ENST00000469415 ZBTB24O43167 697 aaPredicted RBP18.32■□□□□ 0.52
MCF2L-221ENST00000469415 ZMPSTE24O75844 475 aa18.32■□□□□ 0.52
MCF2L-221ENST00000469415 MOCS2O96007 188 aaPredicted RBP18.32■□□□□ 0.52
MCF2L-221ENST00000469415 JCHAINP01591 159 aa18.32■□□□□ 0.52
MCF2L-221ENST00000469415 ZFXP17010 805 aaPredicted RBP18.32■□□□□ 0.52
MCF2L-221ENST00000469415 BDNFP23560 247 aa18.32■□□□□ 0.52
MCF2L-221ENST00000469415 PDE1CQ14123 709 aaPredicted RBP18.32■□□□□ 0.52
MCF2L-221ENST00000469415 PACS1Q6VY07 963 aa18.32■□□□□ 0.52
MCF2L-221ENST00000469415 SPATA6LQ8N4H0 392 aa18.32■□□□□ 0.52
MCF2L-221ENST00000469415 CENPIQ92674 756 aaPredicted RBP18.32■□□□□ 0.52
MCF2L-221ENST00000469415 ZNF778Q96MU6 729 aa18.32■□□□□ 0.52
MCF2L-221ENST00000469415 OXCT2Q9BYC2 517 aaPredicted RBP18.32■□□□□ 0.52
MCF2L-221ENST00000469415 XAB2Q9HCS7 855 aaKnown RBP18.32■□□□□ 0.52
MCF2L-221ENST00000469415 PNPOQ9NVS9 261 aa18.32■□□□□ 0.52
MCF2L-221ENST00000469415 PACSIN3Q9UKS6 424 aa18.32■□□□□ 0.52
MCF2L-221ENST00000469415 STAP1Q9ULZ2 295 aa18.32■□□□□ 0.52
MCF2L-221ENST00000469415 TTC3P53804 2025 aa18.31■□□□□ 0.52
MCF2L-221ENST00000469415 PRR5-ARHGAP8B1AHC4 643 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms