RNA–Protein interactions for RNA: ENST00000467819.5

COL9A3-207, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL9A3, Length 993 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-207ENST00000467819 GAREM1Q9H706 876 aa21.9■■□□□ 1.1
COL9A3-207ENST00000467819 CTNND2Q9UQB3 1225 aa21.9■■□□□ 1.1
COL9A3-207ENST00000467819 ZFYVE26Q68DK2 2539 aa21.89■■□□□ 1.1
COL9A3-207ENST00000467819 PTPRBP23467 1997 aa21.89■■□□□ 1.09
COL9A3-207ENST00000467819 FBXO21O94952 628 aa21.89■■□□□ 1.09
COL9A3-207ENST00000467819 CER1O95813 267 aa21.89■■□□□ 1.09
COL9A3-207ENST00000467819 ATP5BP06576 529 aaKnown RBP21.89■■□□□ 1.09
COL9A3-207ENST00000467819 DLDP09622 509 aaKnown RBP21.89■■□□□ 1.09
COL9A3-207ENST00000467819 POLR2EP19388 210 aaKnown RBP21.89■■□□□ 1.09
COL9A3-207ENST00000467819 PPP1R2P41236 205 aa21.89■■□□□ 1.09
COL9A3-207ENST00000467819 MATKP42679 507 aa21.89■■□□□ 1.09
COL9A3-207ENST00000467819 NUCB2P80303 420 aa21.89■■□□□ 1.09
COL9A3-207ENST00000467819 BNC1Q01954 994 aa21.89■■□□□ 1.09
COL9A3-207ENST00000467819 RING1Q06587 406 aa21.89■■□□□ 1.09
COL9A3-207ENST00000467819 NADSYN1Q6IA69 706 aa21.89■■□□□ 1.09
COL9A3-207ENST00000467819 RAB44Q7Z6P3 723 aaPredicted RBP21.89■■□□□ 1.09
COL9A3-207ENST00000467819 MFN1Q8IWA4 741 aa21.89■■□□□ 1.09
COL9A3-207ENST00000467819 PRSS16Q9NQE7 514 aa21.89■■□□□ 1.09
COL9A3-207ENST00000467819 SLCO1B1Q9Y6L6 691 aa21.89■■□□□ 1.09
COL9A3-207ENST00000467819 PLXNA2O75051 1894 aa21.89■■□□□ 1.09
COL9A3-207ENST00000467819 A0A1B0GVT2 93 aa21.88■■□□□ 1.09
COL9A3-207ENST00000467819 P4HA2O15460 535 aa21.88■■□□□ 1.09
COL9A3-207ENST00000467819 IRAK2O43187 625 aa21.88■■□□□ 1.09
COL9A3-207ENST00000467819 DNTTP04053 509 aa21.88■■□□□ 1.09
COL9A3-207ENST00000467819 FTH1P19P0C7X4 201 aa21.88■■□□□ 1.09
COL9A3-207ENST00000467819 BMP6P22004 513 aa21.88■■□□□ 1.09
COL9A3-207ENST00000467819 RPS14P62263 151 aaKnown RBP21.88■■□□□ 1.09
COL9A3-207ENST00000467819 BECN1Q14457 450 aa21.88■■□□□ 1.09
COL9A3-207ENST00000467819 MPP7Q5T2T1 576 aa21.88■■□□□ 1.09
COL9A3-207ENST00000467819 PNPLA1Q8N8W4 532 aa21.88■■□□□ 1.09
COL9A3-207ENST00000467819 HJURPQ8NCD3 748 aaPredicted RBP21.88■■□□□ 1.09
COL9A3-207ENST00000467819 DQX1Q8TE96 717 aaKnown RBP21.88■■□□□ 1.09
COL9A3-207ENST00000467819 SETD7Q8WTS6 366 aaKnown RBP21.88■■□□□ 1.09
COL9A3-207ENST00000467819 FAM149B1Q96BN6 582 aa21.88■■□□□ 1.09
COL9A3-207ENST00000467819 PRICKLE1Q96MT3 831 aaPredicted RBP21.88■■□□□ 1.09
COL9A3-207ENST00000467819 PCED1AQ9H1Q7 454 aa21.88■■□□□ 1.09
COL9A3-207ENST00000467819 MTG2Q9H4K7 406 aa21.88■■□□□ 1.09
COL9A3-207ENST00000467819 FBRSQ9HAH7 460 aa21.88■■□□□ 1.09
COL9A3-207ENST00000467819 ST7Q9NRC1 585 aa21.88■■□□□ 1.09
COL9A3-207ENST00000467819 FNDC3AQ9Y2H6 1198 aaKnown RBP21.88■■□□□ 1.09
COL9A3-207ENST00000467819 PLXNB3Q9ULL4 1909 aa21.88■■□□□ 1.09
COL9A3-207ENST00000467819 DMXL2Q8TDJ6 3036 aa21.88■■□□□ 1.09
COL9A3-207ENST00000467819 ANKRD11Q6UB99 2663 aaPredicted RBP21.87■■□□□ 1.09
COL9A3-207ENST00000467819 PPP1R3GB7ZBB8 358 aa21.87■■□□□ 1.09
COL9A3-207ENST00000467819 BIN1O00499 593 aa21.87■■□□□ 1.09
COL9A3-207ENST00000467819 SEMA4FO95754 770 aa21.87■■□□□ 1.09
COL9A3-207ENST00000467819 CSNK1EP49674 416 aaKnown RBP21.87■■□□□ 1.09
COL9A3-207ENST00000467819 STX17P56962 302 aa21.87■■□□□ 1.09
COL9A3-207ENST00000467819 GCNT1Q02742 428 aa21.87■■□□□ 1.09
COL9A3-207ENST00000467819 KCNH2Q12809 1159 aa21.87■■□□□ 1.09
COL9A3-207ENST00000467819 HLA-BQ31612 363 aa21.87■■□□□ 1.09
COL9A3-207ENST00000467819 IL27RAQ6UWB1 636 aa21.87■■□□□ 1.09
COL9A3-207ENST00000467819 SCUBE3Q8IX30 993 aa21.87■■□□□ 1.09
COL9A3-207ENST00000467819 EHBP1Q8NDI1 1231 aa21.87■■□□□ 1.09
COL9A3-207ENST00000467819 C1orf216Q8TAB5 229 aa21.87■■□□□ 1.09
COL9A3-207ENST00000467819 ADAM32Q8TC27 787 aa21.87■■□□□ 1.09
COL9A3-207ENST00000467819 MYEOVQ96EZ4 313 aa21.87■■□□□ 1.09
COL9A3-207ENST00000467819 FCRL2Q96LA5 508 aaPredicted RBP21.87■■□□□ 1.09
COL9A3-207ENST00000467819 KREMEN1Q96MU8 473 aa21.87■■□□□ 1.09
COL9A3-207ENST00000467819 SERPINB11Q96P15 392 aa21.87■■□□□ 1.09
COL9A3-207ENST00000467819 IRX2Q9BZI1 471 aaPredicted RBP21.87■■□□□ 1.09
COL9A3-207ENST00000467819 BTBD1Q9H0C5 482 aa21.87■■□□□ 1.09
COL9A3-207ENST00000467819 TM7SF3Q9NS93 570 aa21.87■■□□□ 1.09
COL9A3-207ENST00000467819 PCOLCE2Q9UKZ9 415 aa21.87■■□□□ 1.09
COL9A3-207ENST00000467819 ZBTB32Q9Y2Y4 487 aaPredicted RBP21.87■■□□□ 1.09
COL9A3-207ENST00000467819 BICDL2A1A5D9 508 aa21.86■■□□□ 1.09
COL9A3-207ENST00000467819 TYW5A2RUC4 315 aaKnown RBP21.86■■□□□ 1.09
COL9A3-207ENST00000467819 SRRM3A6NNA2 597 aaPredicted RBP21.86■■□□□ 1.09
COL9A3-207ENST00000467819 MOCS2O96007 188 aaPredicted RBP21.86■■□□□ 1.09
COL9A3-207ENST00000467819 FYNP06241 537 aa21.86■■□□□ 1.09
COL9A3-207ENST00000467819 KRT5P13647 590 aa21.86■■□□□ 1.09
COL9A3-207ENST00000467819 RPS24P62847 133 aaKnown RBP21.86■■□□□ 1.09
COL9A3-207ENST00000467819 TTC31Q49AM3 519 aaPredicted RBP21.86■■□□□ 1.09
COL9A3-207ENST00000467819 ZNF776Q68DI1 518 aaPredicted RBP21.86■■□□□ 1.09
COL9A3-207ENST00000467819 TRIM59Q8IWR1 403 aa21.86■■□□□ 1.09
COL9A3-207ENST00000467819 CARNMT1Q8N4J0 409 aa21.86■■□□□ 1.09
COL9A3-207ENST00000467819 ZNF557Q8N988 423 aaPredicted RBP21.86■■□□□ 1.09
COL9A3-207ENST00000467819 FIBINQ8TAL6 211 aa21.86■■□□□ 1.09
COL9A3-207ENST00000467819 AZIN2Q96A70 460 aa21.86■■□□□ 1.09
COL9A3-207ENST00000467819 DDX50Q9BQ39 737 aaKnown RBP21.86■■□□□ 1.09
COL9A3-207ENST00000467819 INTS2Q9H0H0 1204 aaKnown RBP21.86■■□□□ 1.09
COL9A3-207ENST00000467819 NUCKS1Q9H1E3 243 aaKnown RBP21.86■■□□□ 1.09
COL9A3-207ENST00000467819 SUN2Q9UH99 717 aa21.86■■□□□ 1.09
COL9A3-207ENST00000467819 NAALADL1Q9UQQ1 740 aa21.86■■□□□ 1.09
COL9A3-207ENST00000467819 FSBPO95073 299 aa21.85■■□□□ 1.09
COL9A3-207ENST00000467819 CSKP41240 450 aa21.85■■□□□ 1.09
COL9A3-207ENST00000467819 AFF3P51826 1226 aaKnown RBP21.85■■□□□ 1.09
COL9A3-207ENST00000467819 ST8SIA6P61647 398 aa21.85■■□□□ 1.09
COL9A3-207ENST00000467819 ZBTB16Q05516 673 aa21.85■■□□□ 1.09
COL9A3-207ENST00000467819 DENND1BQ6P3S1 775 aa21.85■■□□□ 1.09
COL9A3-207ENST00000467819 TAC4Q86UU9 113 aa21.85■■□□□ 1.09
COL9A3-207ENST00000467819 ELOA2Q8IYF1 753 aaPredicted RBP21.85■■□□□ 1.09
COL9A3-207ENST00000467819 ADAMTS14Q8WXS8 1223 aa21.85■■□□□ 1.09
COL9A3-207ENST00000467819 MYO19Q96H55 970 aa21.85■■□□□ 1.09
COL9A3-207ENST00000467819 LMLNQ96KR4 655 aa21.85■■□□□ 1.09
COL9A3-207ENST00000467819 APOBEC2Q9Y235 224 aaKnown RBP21.85■■□□□ 1.09
COL9A3-207ENST00000467819 TLR6Q9Y2C9 796 aa21.85■■□□□ 1.09
COL9A3-207ENST00000467819 UTP18Q9Y5J1 556 aaKnown RBP eCLIP21.85■■□□□ 1.09
COL9A3-207ENST00000467819 GTF3C3Q9Y5Q9 886 aa21.85■■□□□ 1.09
COL9A3-207ENST00000467819 DSPP15924 2871 aaKnown RBP21.85■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms