RNA–Protein interactions for RNA: ENST00000466830.5

CMC1-205, Transcript of C-X9-C motif containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMC1, Length 6,033 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-205ENST00000466830 SCARA3Q6AZY7 606 aa11.53□□□□□ -0.56
CMC1-205ENST00000466830 TNIP2Q8NFZ5 429 aa11.53□□□□□ -0.56
CMC1-205ENST00000466830 VTI1BQ9UEU0 232 aa11.53□□□□□ -0.56
CMC1-205ENST00000466830 LOC102724159A0A0B4J2E5 919 aa11.53□□□□□ -0.56
CMC1-205ENST00000466830 MANSC4A6NHS7 340 aaPredicted RBP11.53□□□□□ -0.56
CMC1-205ENST00000466830 EVPLLA8MZ36 301 aa11.53□□□□□ -0.56
CMC1-205ENST00000466830 B4GALT4O60513 344 aa11.53□□□□□ -0.56
CMC1-205ENST00000466830 FKBP9O95302 570 aa11.53□□□□□ -0.56
CMC1-205ENST00000466830 GJB1P08034 283 aa11.53□□□□□ -0.56
CMC1-205ENST00000466830 MBL2P11226 248 aaPredicted RBP11.53□□□□□ -0.56
CMC1-205ENST00000466830 PLOD1Q02809 727 aaPredicted RBP11.53□□□□□ -0.56
CMC1-205ENST00000466830 KRT72Q14CN4 511 aa11.53□□□□□ -0.56
CMC1-205ENST00000466830 PWP2Q15269 919 aaKnown RBP11.53□□□□□ -0.56
CMC1-205ENST00000466830 FKBP9P1Q75LS8 142 aa11.53□□□□□ -0.56
CMC1-205ENST00000466830 VPS37AQ8NEZ2 397 aa11.53□□□□□ -0.56
CMC1-205ENST00000466830 OR9Q1Q8NGQ5 310 aa11.53□□□□□ -0.56
CMC1-205ENST00000466830 TRPM4Q8TD43 1214 aa11.53□□□□□ -0.56
CMC1-205ENST00000466830 SOCS4Q8WXH5 440 aa11.53□□□□□ -0.56
CMC1-205ENST00000466830 APBA2Q99767 749 aa11.53□□□□□ -0.56
CMC1-205ENST00000466830 SH3GL2Q99962 352 aa11.53□□□□□ -0.56
CMC1-205ENST00000466830 RNF19AQ9NV58 838 aa11.53□□□□□ -0.56
CMC1-205ENST00000466830 CHCHD3Q9NX63 227 aaKnown RBP11.53□□□□□ -0.56
CMC1-205ENST00000466830 RGPD8O14715 1765 aaPredicted RBP11.53□□□□□ -0.56
CMC1-205ENST00000466830 NCF1BA6NI72 391 aaPredicted RBP11.52□□□□□ -0.56
CMC1-205ENST00000466830 NCF1CA8MVU1 366 aaPredicted RBP11.52□□□□□ -0.56
CMC1-205ENST00000466830 TBC1D4O60343 1298 aa11.52□□□□□ -0.56
CMC1-205ENST00000466830 NCF1P14598 390 aaPredicted RBP11.52□□□□□ -0.56
CMC1-205ENST00000466830 PEX5P50542 639 aa11.52□□□□□ -0.56
CMC1-205ENST00000466830 SCNN1BP51168 640 aa11.52□□□□□ -0.56
CMC1-205ENST00000466830 ELF3P78545 371 aaPredicted RBP11.52□□□□□ -0.56
CMC1-205ENST00000466830 ILF2Q12905 390 aaKnown RBP11.52□□□□□ -0.56
CMC1-205ENST00000466830 MMRN1Q13201 1228 aa11.52□□□□□ -0.56
CMC1-205ENST00000466830 HS6ST3Q8IZP7 471 aa11.52□□□□□ -0.56
CMC1-205ENST00000466830 SEPT8Q92599 483 aa11.52□□□□□ -0.56
CMC1-205ENST00000466830 ADGRE3Q9BY15 652 aa11.52□□□□□ -0.56
CMC1-205ENST00000466830 EIF2AQ9BY44 585 aaKnown RBP11.52□□□□□ -0.56
CMC1-205ENST00000466830 NMRAL1Q9HBL8 299 aa11.52□□□□□ -0.56
CMC1-205ENST00000466830 OR12D3Q9UGF7 316 aa11.52□□□□□ -0.56
CMC1-205ENST00000466830 EIF3LQ9Y262 564 aaKnown RBP11.52□□□□□ -0.56
CMC1-205ENST00000466830 ANKRD6Q9Y2G4 727 aa11.52□□□□□ -0.56
CMC1-205ENST00000466830 C4BPAP04003 597 aaKnown RBP11.52□□□□□ -0.56
CMC1-205ENST00000466830 ATXN8OSP0DMR3 200 aa11.52□□□□□ -0.56
CMC1-205ENST00000466830 BDNFP23560 247 aa11.52□□□□□ -0.56
CMC1-205ENST00000466830 RNF43Q68DV7 783 aa11.52□□□□□ -0.56
CMC1-205ENST00000466830 LLGL2Q6P1M3 1020 aa11.52□□□□□ -0.56
CMC1-205ENST00000466830 PSTKQ8IV42 348 aaKnown RBP11.52□□□□□ -0.56
CMC1-205ENST00000466830 CLPBQ9H078 707 aa11.52□□□□□ -0.56
CMC1-205ENST00000466830 UNC5CO95185 931 aa11.52□□□□□ -0.57
CMC1-205ENST00000466830 HSDL1Q3SXM5 330 aa11.52□□□□□ -0.57
CMC1-205ENST00000466830 IZUMO2Q6UXV1 221 aa11.52□□□□□ -0.57
CMC1-205ENST00000466830 TAGAPQ8N103 731 aa11.52□□□□□ -0.57
CMC1-205ENST00000466830 LRRC52Q8N7C0 313 aa11.52□□□□□ -0.57
CMC1-205ENST00000466830 GFM2Q969S9 779 aaKnown RBP11.52□□□□□ -0.57
CMC1-205ENST00000466830 TMEM51Q9NW97 253 aa11.52□□□□□ -0.57
CMC1-205ENST00000466830 VPS28Q9UK41 221 aa11.52□□□□□ -0.57
CMC1-205ENST00000466830 CBX4O00257 560 aa11.52□□□□□ -0.57
CMC1-205ENST00000466830 ITGALP20701 1170 aa11.52□□□□□ -0.57
CMC1-205ENST00000466830 PSMB4P28070 264 aa11.52□□□□□ -0.57
CMC1-205ENST00000466830 SLC34A1Q06495 639 aa11.52□□□□□ -0.57
CMC1-205ENST00000466830 MTA1Q13330 715 aa11.52□□□□□ -0.57
CMC1-205ENST00000466830 PTPN20Q4JDL3 420 aa11.52□□□□□ -0.57
CMC1-205ENST00000466830 CACHD1Q5VU97 1274 aa11.52□□□□□ -0.57
CMC1-205ENST00000466830 SNX30Q5VWJ9 437 aa11.52□□□□□ -0.57
CMC1-205ENST00000466830 ARRDC4Q8NCT1 418 aa11.52□□□□□ -0.57
CMC1-205ENST00000466830 SH3GL3Q99963 347 aa11.52□□□□□ -0.57
CMC1-205ENST00000466830 TBL1YQ9BQ87 522 aa11.52□□□□□ -0.57
CMC1-205ENST00000466830 THUMPD3Q9BV44 507 aaKnown RBP11.52□□□□□ -0.57
CMC1-205ENST00000466830 UNKQ9C0B0 810 aaKnown RBP11.52□□□□□ -0.57
CMC1-205ENST00000466830 IL22Q9GZX6 179 aa11.52□□□□□ -0.57
CMC1-205ENST00000466830 MMADHCQ9H3L0 296 aaPredicted RBP11.52□□□□□ -0.57
CMC1-205ENST00000466830 SUFUQ9UMX1 484 aa11.52□□□□□ -0.57
CMC1-205ENST00000466830 EFR3BQ9Y2G0 817 aa11.52□□□□□ -0.57
CMC1-205ENST00000466830 SNX13Q9Y5W8 968 aa11.52□□□□□ -0.57
CMC1-205ENST00000466830 LRG1P02750 347 aa11.52□□□□□ -0.57
CMC1-205ENST00000466830 CKMP06732 381 aa11.52□□□□□ -0.57
CMC1-205ENST00000466830 CYP2C18P33260 490 aa11.52□□□□□ -0.57
CMC1-205ENST00000466830 GRM5P41594 1212 aa11.52□□□□□ -0.57
CMC1-205ENST00000466830 CSE1LP55060 971 aaKnown RBP11.52□□□□□ -0.57
CMC1-205ENST00000466830 RHOAP61586 193 aa11.52□□□□□ -0.57
CMC1-205ENST00000466830 KCTD19Q17RG1 926 aaPredicted RBP11.52□□□□□ -0.57
CMC1-205ENST00000466830 AGKQ53H12 422 aa11.52□□□□□ -0.57
CMC1-205ENST00000466830 B3GALNT2Q8NCR0 500 aa11.52□□□□□ -0.57
CMC1-205ENST00000466830 CLEC4DQ8WXI8 215 aa11.52□□□□□ -0.57
CMC1-205ENST00000466830 MRPS31Q92665 395 aaKnown RBP11.52□□□□□ -0.57
CMC1-205ENST00000466830 COG4Q9H9E3 785 aa11.52□□□□□ -0.57
CMC1-205ENST00000466830 STARD7Q9NQZ5 370 aa11.52□□□□□ -0.57
CMC1-205ENST00000466830 FAM32AQ9Y421 112 aaKnown RBP11.52□□□□□ -0.57
CMC1-205ENST00000466830 V9GYQ6 96 aa11.52□□□□□ -0.57
CMC1-205ENST00000466830 KANSL1LA0AUZ9 987 aa11.51□□□□□ -0.57
CMC1-205ENST00000466830 ERVK-10P10266 1014 aa11.51□□□□□ -0.57
CMC1-205ENST00000466830 ARF4P18085 180 aaPredicted RBP11.51□□□□□ -0.57
CMC1-205ENST00000466830 OR1E1P30953 314 aa11.51□□□□□ -0.57
CMC1-205ENST00000466830 NUMBP49757 651 aa11.51□□□□□ -0.57
CMC1-205ENST00000466830 BEX3Q00994 111 aa11.51□□□□□ -0.57
CMC1-205ENST00000466830 HOMEZQ8IX15 550 aa11.51□□□□□ -0.57
CMC1-205ENST00000466830 JOSD2Q8TAC2 188 aa11.51□□□□□ -0.57
CMC1-205ENST00000466830 ZNF398Q8TD17 642 aa11.51□□□□□ -0.57
CMC1-205ENST00000466830 PHF21BQ96EK2 531 aa11.51□□□□□ -0.57
CMC1-205ENST00000466830 CDK5RAP1Q96SZ6 601 aaKnown RBP11.51□□□□□ -0.57
CMC1-205ENST00000466830 MAF1Q9H063 256 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms