RNA–Protein interactions for RNA: ENST00000466260.1

RTFDC1-205, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 616 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-205ENST00000466260 NCDNQ9UBB6 729 aa10.1□□□□□ -0.79
RTFDC1-205ENST00000466260 RAB23Q9ULC3 237 aa10.1□□□□□ -0.79
RTFDC1-205ENST00000466260 STAP1Q9ULZ2 295 aa10.1□□□□□ -0.79
RTFDC1-205ENST00000466260 CKAP5Q14008 2032 aa10.09□□□□□ -0.79
RTFDC1-205ENST00000466260 DOCK4Q8N1I0 1966 aa10.09□□□□□ -0.79
RTFDC1-205ENST00000466260 WASH3PC4AMC7 463 aa10.09□□□□□ -0.79
RTFDC1-205ENST00000466260 F5H5T6 163 aa10.09□□□□□ -0.79
RTFDC1-205ENST00000466260 DYNC1I1O14576 645 aa10.09□□□□□ -0.79
RTFDC1-205ENST00000466260 ADAM23O75077 832 aa10.09□□□□□ -0.79
RTFDC1-205ENST00000466260 PAPSS2O95340 614 aaPredicted RBP10.09□□□□□ -0.79
RTFDC1-205ENST00000466260 APBB3O95704 486 aa10.09□□□□□ -0.79
RTFDC1-205ENST00000466260 LATS1O95835 1130 aa10.09□□□□□ -0.79
RTFDC1-205ENST00000466260 IGLV3-25P01717 112 aa10.09□□□□□ -0.79
RTFDC1-205ENST00000466260 TUBB4AP04350 444 aa10.09□□□□□ -0.79
RTFDC1-205ENST00000466260 CYP1A1P04798 512 aaPredicted RBP10.09□□□□□ -0.79
RTFDC1-205ENST00000466260 GLI1P08151 1106 aa10.09□□□□□ -0.79
RTFDC1-205ENST00000466260 CISD3P0C7P0 127 aa10.09□□□□□ -0.79
RTFDC1-205ENST00000466260 HOXB1P14653 301 aaPredicted RBP10.09□□□□□ -0.79
RTFDC1-205ENST00000466260 ABCB4P21439 1286 aa10.09□□□□□ -0.79
RTFDC1-205ENST00000466260 NSFP46459 744 aaKnown RBP10.09□□□□□ -0.79
RTFDC1-205ENST00000466260 GABRB2P47870 512 aa10.09□□□□□ -0.79
RTFDC1-205ENST00000466260 RPS24P62847 133 aaKnown RBP10.09□□□□□ -0.79
RTFDC1-205ENST00000466260 ATP11AP98196 1134 aa10.09□□□□□ -0.79
RTFDC1-205ENST00000466260 DEUP1Q05D60 604 aa10.09□□□□□ -0.79
RTFDC1-205ENST00000466260 CRY1Q16526 586 aa10.09□□□□□ -0.79
RTFDC1-205ENST00000466260 CLEC16AQ2KHT3 1053 aa10.09□□□□□ -0.79
RTFDC1-205ENST00000466260 TDRD12Q587J7 1177 aaKnown RBP10.09□□□□□ -0.79
RTFDC1-205ENST00000466260 PIK3R6Q5UE93 754 aa10.09□□□□□ -0.79
RTFDC1-205ENST00000466260 SDE2Q6IQ49 451 aa10.09□□□□□ -0.79
RTFDC1-205ENST00000466260 TRIM72Q6ZMU5 477 aa10.09□□□□□ -0.79
RTFDC1-205ENST00000466260 CHST9Q7L1S5 443 aa10.09□□□□□ -0.79
RTFDC1-205ENST00000466260 WDR5BQ86VZ2 330 aa10.09□□□□□ -0.79
RTFDC1-205ENST00000466260 DNAAF5Q86Y56 855 aa10.09□□□□□ -0.79
RTFDC1-205ENST00000466260 ZDHHC17Q8IUH5 632 aa10.09□□□□□ -0.79
RTFDC1-205ENST00000466260 DCLK2Q8N568 766 aa10.09□□□□□ -0.79
RTFDC1-205ENST00000466260 HJURPQ8NCD3 748 aaPredicted RBP10.09□□□□□ -0.79
RTFDC1-205ENST00000466260 JOSD2Q8TAC2 188 aa10.09□□□□□ -0.79
RTFDC1-205ENST00000466260 CYB5D2Q8WUJ1 264 aa10.09□□□□□ -0.79
RTFDC1-205ENST00000466260 CPLX3Q8WVH0 158 aa10.09□□□□□ -0.79
RTFDC1-205ENST00000466260 BAP1Q92560 729 aa10.09□□□□□ -0.79
RTFDC1-205ENST00000466260 MRFAP1L1Q96HT8 127 aa10.09□□□□□ -0.79
RTFDC1-205ENST00000466260 TBCBQ99426 244 aa10.09□□□□□ -0.79
RTFDC1-205ENST00000466260 AGPAT1Q99943 283 aa10.09□□□□□ -0.79
RTFDC1-205ENST00000466260 DDX50Q9BQ39 737 aaKnown RBP10.09□□□□□ -0.79
RTFDC1-205ENST00000466260 SELENOOQ9BVL4 669 aa10.09□□□□□ -0.79
RTFDC1-205ENST00000466260 FAM126AQ9BYI3 521 aaPredicted RBP10.09□□□□□ -0.79
RTFDC1-205ENST00000466260 SIK2Q9H0K1 926 aa10.09□□□□□ -0.79
RTFDC1-205ENST00000466260 POLMQ9NP87 494 aaPredicted RBP10.09□□□□□ -0.79
RTFDC1-205ENST00000466260 TMPRSS4Q9NRS4 437 aa10.09□□□□□ -0.79
RTFDC1-205ENST00000466260 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.09□□□□□ -0.79
RTFDC1-205ENST00000466260 CALCOCO1Q9P1Z2 691 aa10.09□□□□□ -0.79
RTFDC1-205ENST00000466260 SLC12A6Q9UHW9 1150 aa10.09□□□□□ -0.79
RTFDC1-205ENST00000466260 HCN2Q9UL51 889 aa10.09□□□□□ -0.79
RTFDC1-205ENST00000466260 SNX10Q9Y5X0 201 aa10.09□□□□□ -0.79
RTFDC1-205ENST00000466260 NUP205Q92621 2012 aa10.09□□□□□ -0.79
RTFDC1-205ENST00000466260 CACNA1HO95180 2353 aa10.08□□□□□ -0.8
RTFDC1-205ENST00000466260 PLXND1Q9Y4D7 1925 aa10.08□□□□□ -0.8
RTFDC1-205ENST00000466260 A0A1W2PQC6 194 aa10.08□□□□□ -0.8
RTFDC1-205ENST00000466260 PROB1E7EW31 1015 aa10.08□□□□□ -0.8
RTFDC1-205ENST00000466260 H0Y626 953 aa10.08□□□□□ -0.8
RTFDC1-205ENST00000466260 DCLK1O15075 740 aa10.08□□□□□ -0.8
RTFDC1-205ENST00000466260 HRO43593 1189 aa10.08□□□□□ -0.8
RTFDC1-205ENST00000466260 LILRB5O75023 590 aa10.08□□□□□ -0.8
RTFDC1-205ENST00000466260 RPP40O75818 363 aaKnown RBP10.08□□□□□ -0.8
RTFDC1-205ENST00000466260 ALDH1A2O94788 518 aa10.08□□□□□ -0.8
RTFDC1-205ENST00000466260 CCDC172P0C7W6 258 aa10.08□□□□□ -0.8
RTFDC1-205ENST00000466260 PABPC1P11940 636 aaKnown RBP10.08□□□□□ -0.8
RTFDC1-205ENST00000466260 HLA-EP13747 358 aa10.08□□□□□ -0.8
RTFDC1-205ENST00000466260 TNFAIP3P21580 790 aa10.08□□□□□ -0.8
RTFDC1-205ENST00000466260 HLA-FP30511 346 aa10.08□□□□□ -0.8
RTFDC1-205ENST00000466260 NTSR1P30989 418 aa10.08□□□□□ -0.8
RTFDC1-205ENST00000466260 CCR1P32246 355 aa10.08□□□□□ -0.8
RTFDC1-205ENST00000466260 CD70P32970 193 aa10.08□□□□□ -0.8
RTFDC1-205ENST00000466260 MATKP42679 507 aa10.08□□□□□ -0.8
RTFDC1-205ENST00000466260 GSDMDP57764 484 aa10.08□□□□□ -0.8
RTFDC1-205ENST00000466260 NNTQ13423 1086 aa10.08□□□□□ -0.8
RTFDC1-205ENST00000466260 CDH18Q13634 790 aa10.08□□□□□ -0.8
RTFDC1-205ENST00000466260 NR1I3Q14994 352 aa10.08□□□□□ -0.8
RTFDC1-205ENST00000466260 C15orf59Q2T9L4 293 aaPredicted RBP10.08□□□□□ -0.8
RTFDC1-205ENST00000466260 MS4A13Q5J8X5 152 aa10.08□□□□□ -0.8
RTFDC1-205ENST00000466260 DNTTIP2Q5QJE6 756 aaKnown RBP10.08□□□□□ -0.8
RTFDC1-205ENST00000466260 SFMBT2Q5VUG0 894 aa10.08□□□□□ -0.8
RTFDC1-205ENST00000466260 OTUD1Q5VV17 481 aaPredicted RBP10.08□□□□□ -0.8
RTFDC1-205ENST00000466260 E4F1Q66K89 784 aaPredicted RBP10.08□□□□□ -0.8
RTFDC1-205ENST00000466260 TRNP1Q6NT89 227 aa10.08□□□□□ -0.8
RTFDC1-205ENST00000466260 SND1Q7KZF4 910 aaKnown RBP eCLIP10.08□□□□□ -0.8
RTFDC1-205ENST00000466260 BEND5Q7L4P6 421 aa10.08□□□□□ -0.8
RTFDC1-205ENST00000466260 TRMT11Q7Z4G4 463 aaKnown RBP10.08□□□□□ -0.8
RTFDC1-205ENST00000466260 CCDC117Q8IWD4 279 aaPredicted RBP10.08□□□□□ -0.8
RTFDC1-205ENST00000466260 CAMKK1Q8N5S9 505 aa10.08□□□□□ -0.8
RTFDC1-205ENST00000466260 ZNF366Q8N895 744 aa10.08□□□□□ -0.8
RTFDC1-205ENST00000466260 ZNF454Q8N9F8 522 aa10.08□□□□□ -0.8
RTFDC1-205ENST00000466260 ZNF397Q8NF99 534 aaPredicted RBP10.08□□□□□ -0.8
RTFDC1-205ENST00000466260 MDGA1Q8NFP4 955 aa10.08□□□□□ -0.8
RTFDC1-205ENST00000466260 UCMAQ8WVF2 138 aa10.08□□□□□ -0.8
RTFDC1-205ENST00000466260 RLN3Q8WXF3 142 aa10.08□□□□□ -0.8
RTFDC1-205ENST00000466260 NELL1Q92832 810 aa10.08□□□□□ -0.8
RTFDC1-205ENST00000466260 BTN2A3PQ96KV6 586 aa10.08□□□□□ -0.8
RTFDC1-205ENST00000466260 RPRD1AQ96P16 312 aaPredicted RBP10.08□□□□□ -0.8
RTFDC1-205ENST00000466260 ADAM33Q9BZ11 813 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms