RNA–Protein interactions for RNA: ENST00000461221.5

BRCA1-205, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 5,693 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-205ENST00000461221 PGAM1P18669 254 aa9.19□□□□□ -0.94
BRCA1-205ENST00000461221 KLK7P49862 253 aa9.19□□□□□ -0.94
BRCA1-205ENST00000461221 SGCGQ13326 291 aa9.19□□□□□ -0.94
BRCA1-205ENST00000461221 MYBPC2Q14324 1141 aa9.19□□□□□ -0.94
BRCA1-205ENST00000461221 CTXN3Q4LDR2 81 aa9.19□□□□□ -0.94
BRCA1-205ENST00000461221 INTS11Q5TA45 600 aaKnown RBP9.19□□□□□ -0.94
BRCA1-205ENST00000461221 ZNF280DQ6N043 979 aa9.19□□□□□ -0.94
BRCA1-205ENST00000461221 RETSATQ6NUM9 610 aa9.19□□□□□ -0.94
BRCA1-205ENST00000461221 HHIPL2Q6UWX4 724 aa9.19□□□□□ -0.94
BRCA1-205ENST00000461221 ILDR2Q71H61 639 aa9.19□□□□□ -0.94
BRCA1-205ENST00000461221 STK32CQ86UX6 486 aa9.19□□□□□ -0.94
BRCA1-205ENST00000461221 FAM126BQ8IXS8 530 aa9.19□□□□□ -0.94
BRCA1-205ENST00000461221 CHPFQ8IZ52 775 aa9.19□□□□□ -0.94
BRCA1-205ENST00000461221 COLGALT1Q8NBJ5 622 aa9.19□□□□□ -0.94
BRCA1-205ENST00000461221 BHMTQ93088 406 aa9.19□□□□□ -0.94
BRCA1-205ENST00000461221 PANX3Q96QZ0 392 aa9.19□□□□□ -0.94
BRCA1-205ENST00000461221 PIF1Q9H611 641 aa9.19□□□□□ -0.94
BRCA1-205ENST00000461221 THAP1Q9NVV9 213 aa9.19□□□□□ -0.94
BRCA1-205ENST00000461221 AKAP7Q9P0M2 348 aaPredicted RBP9.19□□□□□ -0.94
BRCA1-205ENST00000461221 PHF11Q9UIL8 331 aa9.19□□□□□ -0.94
BRCA1-205ENST00000461221 TMCO1Q9UM00 188 aa9.19□□□□□ -0.94
BRCA1-205ENST00000461221 CES2O00748 559 aa9.18□□□□□ -0.94
BRCA1-205ENST00000461221 EPN2O95208 641 aa9.18□□□□□ -0.94
BRCA1-205ENST00000461221 CKBP12277 381 aa9.18□□□□□ -0.94
BRCA1-205ENST00000461221 ME2P23368 584 aa9.18□□□□□ -0.94
BRCA1-205ENST00000461221 AP1S2P56377 157 aa9.18□□□□□ -0.94
BRCA1-205ENST00000461221 COPZ1P61923 177 aa9.18□□□□□ -0.94
BRCA1-205ENST00000461221 EFEMP1Q12805 493 aa9.18□□□□□ -0.94
BRCA1-205ENST00000461221 PAGE2BQ5JRK9 111 aa9.18□□□□□ -0.94
BRCA1-205ENST00000461221 MFSD7Q6UXD7 560 aa9.18□□□□□ -0.94
BRCA1-205ENST00000461221 RPTNQ6XPR3 784 aa9.18□□□□□ -0.94
BRCA1-205ENST00000461221 ARHGAP22Q7Z5H3 698 aa9.18□□□□□ -0.94
BRCA1-205ENST00000461221 PTAR1Q7Z6K3 402 aaPredicted RBP9.18□□□□□ -0.94
BRCA1-205ENST00000461221 MILR1Q7Z6M3 343 aa9.18□□□□□ -0.94
BRCA1-205ENST00000461221 ZDHHC13Q8IUH4 622 aa9.18□□□□□ -0.94
BRCA1-205ENST00000461221 ADHFE1Q8IWW8 467 aa9.18□□□□□ -0.94
BRCA1-205ENST00000461221 FNIP1Q8TF40 1166 aa9.18□□□□□ -0.94
BRCA1-205ENST00000461221 MYLPFQ96A32 169 aa9.18□□□□□ -0.94
BRCA1-205ENST00000461221 TEKT5Q96M29 485 aa9.18□□□□□ -0.94
BRCA1-205ENST00000461221 RNF145Q96MT1 663 aa9.18□□□□□ -0.94
BRCA1-205ENST00000461221 PCDH9Q9HC56 1237 aa9.18□□□□□ -0.94
BRCA1-205ENST00000461221 TLR8Q9NR97 1041 aaKnown RBP9.18□□□□□ -0.94
BRCA1-205ENST00000461221 LRRC4BQ9NT99 713 aa9.18□□□□□ -0.94
BRCA1-205ENST00000461221 HACL1Q9UJ83 578 aa9.18□□□□□ -0.94
BRCA1-205ENST00000461221 MAGI2Q86UL8 1455 aa9.18□□□□□ -0.94
BRCA1-205ENST00000461221 PCDH8O95206 1070 aa9.18□□□□□ -0.94
BRCA1-205ENST00000461221 JCHAINP01591 159 aa9.18□□□□□ -0.94
BRCA1-205ENST00000461221 HLA-DQA2P01906 255 aa9.18□□□□□ -0.94
BRCA1-205ENST00000461221 SERPINF2P08697 491 aa9.18□□□□□ -0.94
BRCA1-205ENST00000461221 RAG1P15918 1043 aa9.18□□□□□ -0.94
BRCA1-205ENST00000461221 GP5P40197 560 aa9.18□□□□□ -0.94
BRCA1-205ENST00000461221 CDK7P50613 346 aa9.18□□□□□ -0.94
BRCA1-205ENST00000461221 FCGRTP55899 365 aa9.18□□□□□ -0.94
BRCA1-205ENST00000461221 SRP54P61011 504 aaKnown RBP9.18□□□□□ -0.94
BRCA1-205ENST00000461221 BST2Q10589 180 aaKnown RBP9.18□□□□□ -0.94
BRCA1-205ENST00000461221 MSLNQ13421 630 aaPredicted RBP9.18□□□□□ -0.94
BRCA1-205ENST00000461221 GNASQ5JWF2 1037 aa9.18□□□□□ -0.94
BRCA1-205ENST00000461221 GJB7Q6PEY0 223 aa9.18□□□□□ -0.94
BRCA1-205ENST00000461221 ACOT1Q86TX2 421 aa9.18□□□□□ -0.94
BRCA1-205ENST00000461221 C8orf59Q8N0T1 100 aaPredicted RBP9.18□□□□□ -0.94
BRCA1-205ENST00000461221 LPCAT1Q8NF37 534 aa9.18□□□□□ -0.94
BRCA1-205ENST00000461221 MAGEC3Q8TD91 643 aa9.18□□□□□ -0.94
BRCA1-205ENST00000461221 Q96MT0 163 aa9.18□□□□□ -0.94
BRCA1-205ENST00000461221 SLC25A23Q9BV35 468 aa9.18□□□□□ -0.94
BRCA1-205ENST00000461221 EVA1BQ9NVM1 165 aa9.18□□□□□ -0.94
BRCA1-205ENST00000461221 TAS2R13Q9NYV9 303 aa9.18□□□□□ -0.94
BRCA1-205ENST00000461221 CNOT7Q9UIV1 285 aaKnown RBP9.18□□□□□ -0.94
BRCA1-205ENST00000461221 ERVK-7P63135 1459 aa9.18□□□□□ -0.94
BRCA1-205ENST00000461221 PROSCO94903 275 aa9.18□□□□□ -0.94
BRCA1-205ENST00000461221 ELAVL2Q12926 359 aaKnown RBP9.18□□□□□ -0.94
BRCA1-205ENST00000461221 PPIL2Q13356 520 aa9.18□□□□□ -0.94
BRCA1-205ENST00000461221 N4BP2L1Q5TBK1 243 aaPredicted RBP9.18□□□□□ -0.94
BRCA1-205ENST00000461221 ATXN2LQ8WWM7 1075 aaKnown RBP9.18□□□□□ -0.94
BRCA1-205ENST00000461221 ATG4AQ8WYN0 398 aa9.18□□□□□ -0.94
BRCA1-205ENST00000461221 CRAMP1Q96RY5 1269 aa9.18□□□□□ -0.94
BRCA1-205ENST00000461221 MID1IP1Q9NPA3 183 aa9.18□□□□□ -0.94
BRCA1-205ENST00000461221 KCNH7Q9NS40 1196 aa9.18□□□□□ -0.94
BRCA1-205ENST00000461221 SHOC2Q9UQ13 582 aa9.18□□□□□ -0.94
BRCA1-205ENST00000461221 A0A087X1B8 175 aa9.18□□□□□ -0.94
BRCA1-205ENST00000461221 A0A1W2PRG6 482 aa9.18□□□□□ -0.94
BRCA1-205ENST00000461221 RECQL5O94762 991 aaPredicted RBP9.18□□□□□ -0.94
BRCA1-205ENST00000461221 NPR3P17342 541 aa9.18□□□□□ -0.94
BRCA1-205ENST00000461221 DNAJB2P25686 324 aa9.18□□□□□ -0.94
BRCA1-205ENST00000461221 PON1P27169 355 aa9.18□□□□□ -0.94
BRCA1-205ENST00000461221 THPOP40225 353 aa9.18□□□□□ -0.94
BRCA1-205ENST00000461221 NEK3P51956 506 aa9.18□□□□□ -0.94
BRCA1-205ENST00000461221 FAM187BQ17R55 369 aa9.18□□□□□ -0.94
BRCA1-205ENST00000461221 DDI2Q5TDH0 399 aa9.18□□□□□ -0.94
BRCA1-205ENST00000461221 OXNAD1Q96HP4 312 aaPredicted RBP9.18□□□□□ -0.94
BRCA1-205ENST00000461221 APOPT1Q96IL0 206 aa9.18□□□□□ -0.94
BRCA1-205ENST00000461221 ZNF70Q9UC06 446 aaPredicted RBP9.18□□□□□ -0.94
BRCA1-205ENST00000461221 NEO1Q92859 1461 aa9.18□□□□□ -0.94
BRCA1-205ENST00000461221 A0A087WZ62 844 aa9.18□□□□□ -0.94
BRCA1-205ENST00000461221 RBAK-RBAKDNI3L0D1 243 aa9.18□□□□□ -0.94
BRCA1-205ENST00000461221 CBX4O00257 560 aa9.18□□□□□ -0.94
BRCA1-205ENST00000461221 MTA2O94776 668 aa9.18□□□□□ -0.94
BRCA1-205ENST00000461221 UBOX5O94941 541 aa9.18□□□□□ -0.94
BRCA1-205ENST00000461221 FGFR1P11362 822 aa9.18□□□□□ -0.94
BRCA1-205ENST00000461221 S100A3P33764 101 aa9.18□□□□□ -0.94
BRCA1-205ENST00000461221 CLK3P49761 638 aaKnown RBP9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms