RNA–Protein interactions for RNA: ENST00000459854.5

UFD1-205, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best)

Gene UFD1, Length 5,038 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-205ENST00000459854 FAM213AQ9BRX8 229 aa9.99□□□□□ -0.81
UFD1-205ENST00000459854 TMEM117Q9H0C3 514 aa9.99□□□□□ -0.81
UFD1-205ENST00000459854 SP110Q9HB58 689 aa9.99□□□□□ -0.81
UFD1-205ENST00000459854 TCF7L2Q9NQB0 619 aa9.99□□□□□ -0.81
UFD1-205ENST00000459854 PRKAG2Q9UGJ0 569 aa9.99□□□□□ -0.81
UFD1-205ENST00000459854 ANKRD6Q9Y2G4 727 aa9.99□□□□□ -0.81
UFD1-205ENST00000459854 KIAA1551Q9HCM1 1747 aa9.99□□□□□ -0.81
UFD1-205ENST00000459854 UBA6A0AVT1 1052 aaPredicted RBP9.99□□□□□ -0.81
UFD1-205ENST00000459854 DENND3A2RUS2 1198 aa9.99□□□□□ -0.81
UFD1-205ENST00000459854 ZC3H11AO75152 810 aaKnown RBP eCLIP9.99□□□□□ -0.81
UFD1-205ENST00000459854 STX11O75558 287 aa9.99□□□□□ -0.81
UFD1-205ENST00000459854 MTRF1O75570 445 aaKnown RBP9.99□□□□□ -0.81
UFD1-205ENST00000459854 C6orf222P0C671 652 aaPredicted RBP9.99□□□□□ -0.81
UFD1-205ENST00000459854 ACADSBP45954 432 aa9.99□□□□□ -0.81
UFD1-205ENST00000459854 PSMC5P62195 406 aa9.99□□□□□ -0.81
UFD1-205ENST00000459854 LPIN1Q14693 890 aa9.99□□□□□ -0.81
UFD1-205ENST00000459854 MTERF2Q49AM1 385 aa9.99□□□□□ -0.81
UFD1-205ENST00000459854 BICRALQ6AI39 1079 aa9.99□□□□□ -0.81
UFD1-205ENST00000459854 TMEM26Q6ZUK4 368 aa9.99□□□□□ -0.81
UFD1-205ENST00000459854 RNF135Q8IUD6 432 aa9.99□□□□□ -0.81
UFD1-205ENST00000459854 UNC45BQ8IWX7 931 aa9.99□□□□□ -0.81
UFD1-205ENST00000459854 ULK2Q8IYT8 1036 aa9.99□□□□□ -0.81
UFD1-205ENST00000459854 C8orf59Q8N0T1 100 aaPredicted RBP9.99□□□□□ -0.81
UFD1-205ENST00000459854 SPATA17Q96L03 361 aa9.99□□□□□ -0.81
UFD1-205ENST00000459854 FOPNLQ96NB1 174 aa9.99□□□□□ -0.81
UFD1-205ENST00000459854 MED15Q96RN5 788 aa9.99□□□□□ -0.81
UFD1-205ENST00000459854 RIT2Q99578 217 aa9.99□□□□□ -0.81
UFD1-205ENST00000459854 C6orf62Q9GZU0 229 aaPredicted RBP9.99□□□□□ -0.81
UFD1-205ENST00000459854 HSPBP1Q9NZL4 362 aa9.99□□□□□ -0.81
UFD1-205ENST00000459854 RAPGEFL1Q9UHV5 662 aa9.99□□□□□ -0.81
UFD1-205ENST00000459854 EFCAB10A6NFE3 127 aa9.99□□□□□ -0.81
UFD1-205ENST00000459854 MAGEB2O15479 319 aa9.99□□□□□ -0.81
UFD1-205ENST00000459854 HUS1O60921 280 aa9.99□□□□□ -0.81
UFD1-205ENST00000459854 GLI1P08151 1106 aa9.99□□□□□ -0.81
UFD1-205ENST00000459854 RBP3P10745 1247 aa9.99□□□□□ -0.81
UFD1-205ENST00000459854 SCRN3Q0VDG4 424 aa9.99□□□□□ -0.81
UFD1-205ENST00000459854 NFYCQ13952 458 aa9.99□□□□□ -0.81
UFD1-205ENST00000459854 QPRTQ15274 297 aa9.99□□□□□ -0.81
UFD1-205ENST00000459854 PKN3Q6P5Z2 889 aa9.99□□□□□ -0.81
UFD1-205ENST00000459854 SIX5Q8N196 739 aa9.99□□□□□ -0.81
UFD1-205ENST00000459854 TTC30BQ8N4P2 665 aa9.99□□□□□ -0.81
UFD1-205ENST00000459854 PIK3C3Q8NEB9 887 aa9.99□□□□□ -0.81
UFD1-205ENST00000459854 APPL2Q8NEU8 664 aa9.99□□□□□ -0.81
UFD1-205ENST00000459854 SPATA18Q8TC71 538 aa9.99□□□□□ -0.81
UFD1-205ENST00000459854 FBXO25Q8TCJ0 367 aa9.99□□□□□ -0.81
UFD1-205ENST00000459854 ZNF333Q96JL9 665 aa9.99□□□□□ -0.81
UFD1-205ENST00000459854 SLC25A23Q9BV35 468 aa9.99□□□□□ -0.81
UFD1-205ENST00000459854 PACSIN1Q9BY11 444 aa9.99□□□□□ -0.81
UFD1-205ENST00000459854 PORCNQ9H237 461 aa9.99□□□□□ -0.81
UFD1-205ENST00000459854 TRIM39Q9HCM9 518 aa9.99□□□□□ -0.81
UFD1-205ENST00000459854 TMEM8AQ9HCN3 771 aa9.99□□□□□ -0.81
UFD1-205ENST00000459854 ATP6V1HQ9UI12 483 aa9.99□□□□□ -0.81
UFD1-205ENST00000459854 CCDC162PA2VCL2 907 aa9.99□□□□□ -0.81
UFD1-205ENST00000459854 KPNA6O60684 536 aa9.99□□□□□ -0.81
UFD1-205ENST00000459854 HMGCRP04035 888 aa9.99□□□□□ -0.81
UFD1-205ENST00000459854 ABHD2P08910 425 aa9.99□□□□□ -0.81
UFD1-205ENST00000459854 PDGFRBP09619 1106 aa9.99□□□□□ -0.81
UFD1-205ENST00000459854 CPA3P15088 417 aa9.99□□□□□ -0.81
UFD1-205ENST00000459854 ANPEPP15144 967 aa9.99□□□□□ -0.81
UFD1-205ENST00000459854 SERPINB5P36952 375 aa9.99□□□□□ -0.81
UFD1-205ENST00000459854 ERFP50548 548 aa9.99□□□□□ -0.81
UFD1-205ENST00000459854 FXR2P51116 673 aaKnown RBP eCLIP9.99□□□□□ -0.81
UFD1-205ENST00000459854 OLR1P78380 273 aa9.99□□□□□ -0.81
UFD1-205ENST00000459854 MAD2L1Q13257 205 aaPredicted RBP9.99□□□□□ -0.81
UFD1-205ENST00000459854 PDK2Q15119 407 aa9.99□□□□□ -0.81
UFD1-205ENST00000459854 PGM5Q15124 567 aa9.99□□□□□ -0.81
UFD1-205ENST00000459854 SLC5A9Q2M3M2 681 aa9.99□□□□□ -0.81
UFD1-205ENST00000459854 PDCD4Q53EL6 469 aaKnown RBP9.99□□□□□ -0.81
UFD1-205ENST00000459854 IQSEC1Q6DN90 963 aa9.99□□□□□ -0.81
UFD1-205ENST00000459854 PRR23CQ6ZRP0 262 aa9.99□□□□□ -0.81
UFD1-205ENST00000459854 NIPA1Q7RTP0 329 aa9.99□□□□□ -0.81
UFD1-205ENST00000459854 SCAIQ8N9R8 606 aa9.99□□□□□ -0.81
UFD1-205ENST00000459854 RNFT2Q96EX2 444 aa9.99□□□□□ -0.81
UFD1-205ENST00000459854 NSMCE2Q96MF7 247 aa9.99□□□□□ -0.81
UFD1-205ENST00000459854 PLEKHG4BQ96PX9 1271 aa9.99□□□□□ -0.81
UFD1-205ENST00000459854 KCTD14Q9BQ13 255 aaPredicted RBP9.99□□□□□ -0.81
UFD1-205ENST00000459854 CLK4Q9HAZ1 481 aaKnown RBP9.99□□□□□ -0.81
UFD1-205ENST00000459854 BIRC5O15392 142 aa9.98□□□□□ -0.81
UFD1-205ENST00000459854 DGKIO75912 1065 aa9.98□□□□□ -0.81
UFD1-205ENST00000459854 TDP2O95551 362 aa9.98□□□□□ -0.81
UFD1-205ENST00000459854 SLC4A1P02730 911 aa9.98□□□□□ -0.81
UFD1-205ENST00000459854 ANXA6P08133 673 aa9.98□□□□□ -0.81
UFD1-205ENST00000459854 NUDT17P0C025 328 aa9.98□□□□□ -0.81
UFD1-205ENST00000459854 MSH3P20585 1137 aa9.98□□□□□ -0.81
UFD1-205ENST00000459854 TGFBR2P37173 567 aa9.98□□□□□ -0.81
UFD1-205ENST00000459854 DRG2P55039 364 aaKnown RBP9.98□□□□□ -0.81
UFD1-205ENST00000459854 DENND1BQ6P3S1 775 aa9.98□□□□□ -0.81
UFD1-205ENST00000459854 FOXR1Q6PIV2 292 aa9.98□□□□□ -0.81
UFD1-205ENST00000459854 ZBTB33Q86T24 672 aa9.98□□□□□ -0.81
UFD1-205ENST00000459854 DENND6AQ8IWF6 608 aa9.98□□□□□ -0.81
UFD1-205ENST00000459854 PCSK9Q8NBP7 692 aaKnown RBP9.98□□□□□ -0.81
UFD1-205ENST00000459854 MTMR8Q96EF0 704 aa9.98□□□□□ -0.81
UFD1-205ENST00000459854 ZNF518BQ9C0D4 1074 aa9.98□□□□□ -0.81
UFD1-205ENST00000459854 PCDH9Q9HC56 1237 aa9.98□□□□□ -0.81
UFD1-205ENST00000459854 AVENQ9NQS1 362 aaPredicted RBP9.98□□□□□ -0.81
UFD1-205ENST00000459854 ARHGEF3Q9NR81 526 aa9.98□□□□□ -0.81
UFD1-205ENST00000459854 PRPF19Q9UMS4 504 aaKnown RBP9.98□□□□□ -0.81
UFD1-205ENST00000459854 TMED5Q9Y3A6 229 aa9.98□□□□□ -0.81
UFD1-205ENST00000459854 MAGEB16A2A368 324 aa9.98□□□□□ -0.81
UFD1-205ENST00000459854 SDR42E2A6NKP2 422 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms