RNA–Protein interactions for RNA: ENST00000459004.1

SCARNA18-201, small Cajal body-specific RNA 18, humanhuman

BASIC

Gene SCARNA18, Length 134 nt, Biotype snoRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA18-201ENST00000459004 RTKNQ9BST9 563 aa3.41□□□□□ -1.86
SCARNA18-201ENST00000459004 SFXN1Q9H9B4 322 aa3.41□□□□□ -1.86
SCARNA18-201ENST00000459004 MOV10Q9HCE1 1003 aaKnown RBP3.41□□□□□ -1.86
SCARNA18-201ENST00000459004 DACT1Q9NYF0 836 aa3.41□□□□□ -1.86
SCARNA18-201ENST00000459004 TAGLN3Q9UI15 199 aa3.41□□□□□ -1.86
SCARNA18-201ENST00000459004 IPO11Q9UI26 975 aaKnown RBP3.41□□□□□ -1.86
SCARNA18-201ENST00000459004 CNTN6Q9UQ52 1028 aa3.41□□□□□ -1.86
SCARNA18-201ENST00000459004 ZNF521Q96K83 1311 aa3.41□□□□□ -1.86
SCARNA18-201ENST00000459004 CYP3A7-CYP3A51PA0A087WV96 503 aa3.4□□□□□ -1.87
SCARNA18-201ENST00000459004 TBC1D3DA0A087WVF3 549 aa3.4□□□□□ -1.87
SCARNA18-201ENST00000459004 TBC1D3IA0A087WXS9 549 aa3.4□□□□□ -1.87
SCARNA18-201ENST00000459004 TBC1D3EA0A087X179 549 aa3.4□□□□□ -1.87
SCARNA18-201ENST00000459004 TBC1D3KA0A087X1G2 549 aa3.4□□□□□ -1.87
SCARNA18-201ENST00000459004 TBC1D3BA6NDS4 549 aa3.4□□□□□ -1.87
SCARNA18-201ENST00000459004 TBC1D3FA6NER0 549 aaPredicted RBP3.4□□□□□ -1.87
SCARNA18-201ENST00000459004 KIF28PB7ZC32 967 aa3.4□□□□□ -1.87
SCARNA18-201ENST00000459004 TBC1D3LB9A6J9 549 aa3.4□□□□□ -1.87
SCARNA18-201ENST00000459004 ALDOAP04075 364 aaKnown RBP3.4□□□□□ -1.87
SCARNA18-201ENST00000459004 CSTBP04080 98 aaKnown RBP3.4□□□□□ -1.87
SCARNA18-201ENST00000459004 TMEM191BP0C7N4 346 aa3.4□□□□□ -1.87
SCARNA18-201ENST00000459004 RFPL3SP0C7P2 107 aa3.4□□□□□ -1.87
SCARNA18-201ENST00000459004 TBC1D3HP0C7X1 549 aa3.4□□□□□ -1.87
SCARNA18-201ENST00000459004 IGFBP2P18065 325 aa3.4□□□□□ -1.87
SCARNA18-201ENST00000459004 TGM2P21980 687 aa3.4□□□□□ -1.87
SCARNA18-201ENST00000459004 CYP3A7P24462 503 aa3.4□□□□□ -1.87
SCARNA18-201ENST00000459004 SLC37A1P57057 533 aa3.4□□□□□ -1.87
SCARNA18-201ENST00000459004 SF3A3Q12874 501 aaKnown RBP eCLIP3.4□□□□□ -1.87
SCARNA18-201ENST00000459004 BLMHQ13867 455 aa3.4□□□□□ -1.87
SCARNA18-201ENST00000459004 RBMS2Q15434 407 aaKnown RBP3.4□□□□□ -1.87
SCARNA18-201ENST00000459004 BTBD16Q32M84 506 aa3.4□□□□□ -1.87
SCARNA18-201ENST00000459004 CCDC38Q502W7 563 aa3.4□□□□□ -1.87
SCARNA18-201ENST00000459004 TBC1D3GQ6DHY5 549 aa3.4□□□□□ -1.87
SCARNA18-201ENST00000459004 TBC1D3CQ6IPX1 549 aa3.4□□□□□ -1.87
SCARNA18-201ENST00000459004 NFRKBQ6P4R8 1299 aa3.4□□□□□ -1.87
SCARNA18-201ENST00000459004 KLHL17Q6TDP4 642 aa3.4□□□□□ -1.87
SCARNA18-201ENST00000459004 RINLQ6ZS11 566 aa3.4□□□□□ -1.87
SCARNA18-201ENST00000459004 ANKRD13BQ86YJ7 626 aa3.4□□□□□ -1.87
SCARNA18-201ENST00000459004 ADGRF4Q8IZF3 695 aa3.4□□□□□ -1.87
SCARNA18-201ENST00000459004 TBC1D3Q8IZP1 549 aaPredicted RBP3.4□□□□□ -1.87
SCARNA18-201ENST00000459004 FAM47BQ8NA70 645 aa3.4□□□□□ -1.87
SCARNA18-201ENST00000459004 VPS37AQ8NEZ2 397 aa3.4□□□□□ -1.87
SCARNA18-201ENST00000459004 OR1N1Q8NGS0 311 aa3.4□□□□□ -1.87
SCARNA18-201ENST00000459004 WIPF2Q8TF74 440 aaPredicted RBP3.4□□□□□ -1.87
SCARNA18-201ENST00000459004 SCARB1Q8WTV0 552 aa3.4□□□□□ -1.87
SCARNA18-201ENST00000459004 HMGB4Q8WW32 186 aa3.4□□□□□ -1.87
SCARNA18-201ENST00000459004 IGFBPL1Q8WX77 278 aa3.4□□□□□ -1.87
SCARNA18-201ENST00000459004 ZFYVE19Q96K21 471 aa3.4□□□□□ -1.87
SCARNA18-201ENST00000459004 ABHD14AQ9BUJ0 271 aa3.4□□□□□ -1.87
SCARNA18-201ENST00000459004 MECRQ9BV79 373 aa3.4□□□□□ -1.87
SCARNA18-201ENST00000459004 SCNM1Q9BWG6 230 aa3.4□□□□□ -1.87
SCARNA18-201ENST00000459004 LIN7CQ9NUP9 197 aaKnown RBP3.4□□□□□ -1.87
SCARNA18-201ENST00000459004 ELOVL5Q9NYP7 299 aa3.4□□□□□ -1.87
SCARNA18-201ENST00000459004 LRFN1Q9P244 771 aa3.4□□□□□ -1.87
SCARNA18-201ENST00000459004 RAB21Q9UL25 225 aa3.4□□□□□ -1.87
SCARNA18-201ENST00000459004 TRPC5Q9UL62 973 aaPredicted RBP3.4□□□□□ -1.87
SCARNA18-201ENST00000459004 LMTK3Q96Q04 1460 aa3.4□□□□□ -1.87
SCARNA18-201ENST00000459004 ZNF335Q9H4Z2 1342 aaPredicted RBP3.4□□□□□ -1.87
SCARNA18-201ENST00000459004 SLC38A8A6NNN8 435 aa3.39□□□□□ -1.87
SCARNA18-201ENST00000459004 F8W810 466 aa3.39□□□□□ -1.87
SCARNA18-201ENST00000459004 SOCS2O14508 198 aa3.39□□□□□ -1.87
SCARNA18-201ENST00000459004 PRPF4O43172 522 aaKnown RBP eCLIP3.39□□□□□ -1.87
SCARNA18-201ENST00000459004 CNTN5O94779 1100 aa3.39□□□□□ -1.87
SCARNA18-201ENST00000459004 ACTL6BO94805 426 aa3.39□□□□□ -1.87
SCARNA18-201ENST00000459004 GYS1P13807 737 aa3.39□□□□□ -1.87
SCARNA18-201ENST00000459004 NR4A2P43354 598 aa3.39□□□□□ -1.87
SCARNA18-201ENST00000459004 FOXL2P58012 376 aa3.39□□□□□ -1.87
SCARNA18-201ENST00000459004 TAS2R50P59544 299 aa3.39□□□□□ -1.87
SCARNA18-201ENST00000459004 AP2B1P63010 937 aa3.39□□□□□ -1.87
SCARNA18-201ENST00000459004 SRSF1Q07955 248 aaKnown RBP eCLIP3.39□□□□□ -1.87
SCARNA18-201ENST00000459004 FOXO1Q12778 655 aa3.39□□□□□ -1.87
SCARNA18-201ENST00000459004 BIRC2Q13490 618 aa3.39□□□□□ -1.87
SCARNA18-201ENST00000459004 LAMB3Q13751 1172 aa3.39□□□□□ -1.87
SCARNA18-201ENST00000459004 TWIST1Q15672 202 aa3.39□□□□□ -1.87
SCARNA18-201ENST00000459004 TBRG1Q3YBR2 411 aa3.39□□□□□ -1.87
SCARNA18-201ENST00000459004 LIPMQ5VYY2 423 aa3.39□□□□□ -1.87
SCARNA18-201ENST00000459004 ZNF474Q6S9Z5 364 aaPredicted RBP3.39□□□□□ -1.87
SCARNA18-201ENST00000459004 RAB11FIP2Q7L804 512 aa3.39□□□□□ -1.87
SCARNA18-201ENST00000459004 SLC44A2Q8IWA5 706 aaPredicted RBP3.39□□□□□ -1.87
SCARNA18-201ENST00000459004 SUGP2Q8IX01 1082 aaKnown RBP eCLIP3.39□□□□□ -1.87
SCARNA18-201ENST00000459004 ARL14EPQ8N8R7 260 aaPredicted RBP3.39□□□□□ -1.87
SCARNA18-201ENST00000459004 ENAHQ8N8S7 591 aaPredicted RBP3.39□□□□□ -1.87
SCARNA18-201ENST00000459004 ZFPM2Q8WW38 1151 aa3.39□□□□□ -1.87
SCARNA18-201ENST00000459004 FCRL4Q96PJ5 515 aa3.39□□□□□ -1.87
SCARNA18-201ENST00000459004 RPS6KC1Q96S38 1066 aa3.39□□□□□ -1.87
SCARNA18-201ENST00000459004 TRMOQ9BU70 441 aa3.39□□□□□ -1.87
SCARNA18-201ENST00000459004 TUBB6Q9BUF5 446 aa3.39□□□□□ -1.87
SCARNA18-201ENST00000459004 HTATIP2Q9BUP3 242 aa3.39□□□□□ -1.87
SCARNA18-201ENST00000459004 BRD8Q9H0E9 1235 aa3.39□□□□□ -1.87
SCARNA18-201ENST00000459004 PABPC3Q9H361 631 aaKnown RBP3.39□□□□□ -1.87
SCARNA18-201ENST00000459004 MLXIPQ9HAP2 919 aa3.39□□□□□ -1.87
SCARNA18-201ENST00000459004 PAPOLBQ9NRJ5 636 aaKnown RBP3.39□□□□□ -1.87
SCARNA18-201ENST00000459004 TMEM45AQ9NWC5 275 aa3.39□□□□□ -1.87
SCARNA18-201ENST00000459004 AFG3L2Q9Y4W6 797 aa3.39□□□□□ -1.87
SCARNA18-201ENST00000459004 MBD3L5A6NJ08 208 aaPredicted RBP3.38□□□□□ -1.87
SCARNA18-201ENST00000459004 ACKR2O00590 384 aa3.38□□□□□ -1.87
SCARNA18-201ENST00000459004 TRIM38O00635 465 aa3.38□□□□□ -1.87
SCARNA18-201ENST00000459004 ALDOCP09972 364 aaKnown RBP3.38□□□□□ -1.87
SCARNA18-201ENST00000459004 CYP19A1P11511 503 aaPredicted RBP3.38□□□□□ -1.87
SCARNA18-201ENST00000459004 PRF1P14222 555 aa3.38□□□□□ -1.87
SCARNA18-201ENST00000459004 FAM3BP58499 235 aaPredicted RBP3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms