RNA–Protein interactions for RNA: ENST00000455631.5

PTPRA-208, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5

Gene PTPRA, Length 1,107 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-208ENST00000455631 ARRB1P49407 418 aaPredicted RBP24.2■■□□□ 1.46
PTPRA-208ENST00000455631 SGSHP51688 502 aa24.2■■□□□ 1.46
PTPRA-208ENST00000455631 TKTL1P51854 596 aa24.2■■□□□ 1.46
PTPRA-208ENST00000455631 GALCP54803 685 aa24.2■■□□□ 1.46
PTPRA-208ENST00000455631 TLE3Q04726 772 aa24.2■■□□□ 1.46
PTPRA-208ENST00000455631 ERICH6BQ5W0A0 696 aa24.2■■□□□ 1.46
PTPRA-208ENST00000455631 KIAA0907Q7Z7F0 614 aaPredicted RBP24.2■■□□□ 1.46
PTPRA-208ENST00000455631 TAS1R2Q8TE23 839 aa24.2■■□□□ 1.46
PTPRA-208ENST00000455631 TMEM176AQ96HP8 235 aa24.2■■□□□ 1.46
PTPRA-208ENST00000455631 EBF2Q9HAK2 575 aa24.2■■□□□ 1.46
PTPRA-208ENST00000455631 OLA1Q9NTK5 396 aaKnown RBP24.2■■□□□ 1.46
PTPRA-208ENST00000455631 FRMD4BQ9Y2L6 1034 aa24.2■■□□□ 1.46
PTPRA-208ENST00000455631 ZNF462Q96JM2 2506 aa24.19■■□□□ 1.46
PTPRA-208ENST00000455631 A0A1W2PP55 124 aa24.19■■□□□ 1.46
PTPRA-208ENST00000455631 CUTAO60888 179 aa24.19■■□□□ 1.46
PTPRA-208ENST00000455631 CD70P32970 193 aa24.19■■□□□ 1.46
PTPRA-208ENST00000455631 ACTN2P35609 894 aa24.19■■□□□ 1.46
PTPRA-208ENST00000455631 RAB41Q5JT25 222 aa24.19■■□□□ 1.46
PTPRA-208ENST00000455631 KIAA0895Q8NCT3 520 aa24.19■■□□□ 1.46
PTPRA-208ENST00000455631 CCDC150Q8NCX0 1101 aa24.19■■□□□ 1.46
PTPRA-208ENST00000455631 WFDC5Q8TCV5 224 aa24.19■■□□□ 1.46
PTPRA-208ENST00000455631 TSC1Q92574 1164 aa24.19■■□□□ 1.46
PTPRA-208ENST00000455631 NDRG1Q92597 394 aaKnown RBP24.19■■□□□ 1.46
PTPRA-208ENST00000455631 SFMBT1Q9UHJ3 866 aa24.19■■□□□ 1.46
PTPRA-208ENST00000455631 HBS1LQ9Y450 684 aaKnown RBP24.19■■□□□ 1.46
PTPRA-208ENST00000455631 LRRC72A6NJI9 287 aa24.18■■□□□ 1.46
PTPRA-208ENST00000455631 MID1O15344 667 aa24.18■■□□□ 1.46
PTPRA-208ENST00000455631 RNASEH1O60930 286 aaKnown RBP24.18■■□□□ 1.46
PTPRA-208ENST00000455631 ZBED1O96006 694 aa24.18■■□□□ 1.46
PTPRA-208ENST00000455631 GCLMP48507 274 aa24.18■■□□□ 1.46
PTPRA-208ENST00000455631 VAMP7P51809 220 aa24.18■■□□□ 1.46
PTPRA-208ENST00000455631 STK4Q13043 487 aa24.18■■□□□ 1.46
PTPRA-208ENST00000455631 ADGRF1Q5T601 910 aa24.18■■□□□ 1.46
PTPRA-208ENST00000455631 PCSK4Q6UW60 755 aa24.18■■□□□ 1.46
PTPRA-208ENST00000455631 SPACA3Q8IXA5 215 aa24.18■■□□□ 1.46
PTPRA-208ENST00000455631 GRAMD1CQ8IYS0 662 aa24.18■■□□□ 1.46
PTPRA-208ENST00000455631 RNF139Q8WU17 664 aa24.18■■□□□ 1.46
PTPRA-208ENST00000455631 TMEM174Q8WUU8 243 aa24.18■■□□□ 1.46
PTPRA-208ENST00000455631 ULBP1Q9BZM6 244 aa24.18■■□□□ 1.46
PTPRA-208ENST00000455631 KCTD10Q9H3F6 313 aa24.18■■□□□ 1.46
PTPRA-208ENST00000455631 MMRN2Q9H8L6 949 aa24.18■■□□□ 1.46
PTPRA-208ENST00000455631 STOML2Q9UJZ1 356 aa24.18■■□□□ 1.46
PTPRA-208ENST00000455631 CAPN8A6NHC0 703 aa24.17■■□□□ 1.46
PTPRA-208ENST00000455631 WNT9AO14904 365 aa24.17■■□□□ 1.46
PTPRA-208ENST00000455631 SIN3BO75182 1162 aa24.17■■□□□ 1.46
PTPRA-208ENST00000455631 RNASEH2AO75792 299 aaKnown RBP24.17■■□□□ 1.46
PTPRA-208ENST00000455631 TRIM49P0CI25 452 aa24.17■■□□□ 1.46
PTPRA-208ENST00000455631 TRIM49CP0CI26 452 aa24.17■■□□□ 1.46
PTPRA-208ENST00000455631 GLDCP23378 1020 aa24.17■■□□□ 1.46
PTPRA-208ENST00000455631 SLC8A3P57103 927 aa24.17■■□□□ 1.46
PTPRA-208ENST00000455631 ST8SIA6P61647 398 aa24.17■■□□□ 1.46
PTPRA-208ENST00000455631 SFSWAPQ12872 951 aaKnown RBP24.17■■□□□ 1.46
PTPRA-208ENST00000455631 CST6Q15828 149 aa24.17■■□□□ 1.46
PTPRA-208ENST00000455631 TBC1D25Q3MII6 688 aa24.17■■□□□ 1.46
PTPRA-208ENST00000455631 TAF1BQ53T94 588 aaPredicted RBP24.17■■□□□ 1.46
PTPRA-208ENST00000455631 DHX40Q8IX18 779 aaKnown RBP24.17■■□□□ 1.46
PTPRA-208ENST00000455631 OR2T34Q8NGX1 318 aa24.17■■□□□ 1.46
PTPRA-208ENST00000455631 OMDQ99983 421 aa24.17■■□□□ 1.46
PTPRA-208ENST00000455631 UBXN6Q9BZV1 441 aa24.17■■□□□ 1.46
PTPRA-208ENST00000455631 NEUROG2Q9H2A3 272 aa24.17■■□□□ 1.46
PTPRA-208ENST00000455631 EXOC1Q9NV70 894 aa24.17■■□□□ 1.46
PTPRA-208ENST00000455631 CLCA2Q9UQC9 943 aa24.17■■□□□ 1.46
PTPRA-208ENST00000455631 A0A1W2PR77 199 aa24.16■■□□□ 1.46
PTPRA-208ENST00000455631 MSI1O43347 362 aaKnown RBP24.16■■□□□ 1.46
PTPRA-208ENST00000455631 TBL1XO60907 577 aa24.16■■□□□ 1.46
PTPRA-208ENST00000455631 LATS1O95835 1130 aa24.16■■□□□ 1.46
PTPRA-208ENST00000455631 SLFN14P0C7P3 912 aa24.16■■□□□ 1.46
PTPRA-208ENST00000455631 BNIP3Q12983 259 aa24.16■■□□□ 1.46
PTPRA-208ENST00000455631 ILKQ13418 452 aa24.16■■□□□ 1.46
PTPRA-208ENST00000455631 KCNJ12Q14500 433 aa24.16■■□□□ 1.46
PTPRA-208ENST00000455631 BHLHA9Q7RTU4 235 aa24.16■■□□□ 1.46
PTPRA-208ENST00000455631 ERICH1Q86X53 443 aa24.16■■□□□ 1.46
PTPRA-208ENST00000455631 MMAAQ8IVH4 418 aaKnown RBP24.16■■□□□ 1.46
PTPRA-208ENST00000455631 EDEM1Q92611 657 aa24.16■■□□□ 1.46
PTPRA-208ENST00000455631 SERAC1Q96JX3 654 aa24.16■■□□□ 1.46
PTPRA-208ENST00000455631 LGMNQ99538 433 aa24.16■■□□□ 1.46
PTPRA-208ENST00000455631 NYNRINQ9P2P1 1898 aaKnown RBP24.15■■□□□ 1.46
PTPRA-208ENST00000455631 ERVH48-1M5A8F1 160 aa24.15■■□□□ 1.46
PTPRA-208ENST00000455631 PDXKO00764 312 aa24.15■■□□□ 1.46
PTPRA-208ENST00000455631 CKMT2P17540 419 aa24.15■■□□□ 1.46
PTPRA-208ENST00000455631 NXPH1P58417 271 aa24.15■■□□□ 1.46
PTPRA-208ENST00000455631 PPP3CAQ08209 521 aa24.15■■□□□ 1.46
PTPRA-208ENST00000455631 HNRNPA1L2Q32P51 320 aaKnown RBP24.15■■□□□ 1.46
PTPRA-208ENST00000455631 SLC45A4Q5BKX6 768 aa24.15■■□□□ 1.46
PTPRA-208ENST00000455631 PM20D1Q6GTS8 502 aa24.15■■□□□ 1.46
PTPRA-208ENST00000455631 RFWD3Q6PCD5 774 aa24.15■■□□□ 1.46
PTPRA-208ENST00000455631 MYO19Q96H55 970 aa24.15■■□□□ 1.46
PTPRA-208ENST00000455631 ZNF396Q96N95 335 aaPredicted RBP24.15■■□□□ 1.46
PTPRA-208ENST00000455631 FZD4Q9ULV1 537 aa24.15■■□□□ 1.46
PTPRA-208ENST00000455631 TLR4O00206 839 aa24.14■■□□□ 1.45
PTPRA-208ENST00000455631 KLRC4O43908 158 aa24.14■■□□□ 1.45
PTPRA-208ENST00000455631 KCNH2Q12809 1159 aa24.14■■□□□ 1.45
PTPRA-208ENST00000455631 SFMBT2Q5VUG0 894 aa24.14■■□□□ 1.45
PTPRA-208ENST00000455631 ARHGAP17Q68EM7 881 aa24.14■■□□□ 1.45
PTPRA-208ENST00000455631 MFN1Q8IWA4 741 aa24.14■■□□□ 1.45
PTPRA-208ENST00000455631 OXR1Q8N573 874 aa24.14■■□□□ 1.45
PTPRA-208ENST00000455631 ANKRD52Q8NB46 1076 aa24.14■■□□□ 1.45
PTPRA-208ENST00000455631 SLC4A11Q8NBS3 891 aa24.14■■□□□ 1.45
PTPRA-208ENST00000455631 NAF1Q96HR8 494 aaKnown RBP24.14■■□□□ 1.45
PTPRA-208ENST00000455631 IPO9Q96P70 1041 aaKnown RBP24.14■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms