RNA–Protein interactions for RNA: ENST00000455343.5

RBM39-220, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 441 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-220ENST00000455343 PRODHO43272 600 aa4.04□□□□□ -1.76
RBM39-220ENST00000455343 B4GALT5O43286 388 aa4.04□□□□□ -1.76
RBM39-220ENST00000455343 PRPF3O43395 683 aaKnown RBP4.04□□□□□ -1.76
RBM39-220ENST00000455343 KLF4O43474 513 aa4.04□□□□□ -1.76
RBM39-220ENST00000455343 DKC1O60832 514 aaKnown RBP eCLIP4.04□□□□□ -1.76
RBM39-220ENST00000455343 SEC24AO95486 1093 aa4.04□□□□□ -1.76
RBM39-220ENST00000455343 NPTXRO95502 500 aa4.04□□□□□ -1.76
RBM39-220ENST00000455343 TDP2O95551 362 aa4.04□□□□□ -1.76
RBM39-220ENST00000455343 CNOT4O95628 575 aaKnown RBP4.04□□□□□ -1.76
RBM39-220ENST00000455343 FSHBP01225 129 aa4.04□□□□□ -1.76
RBM39-220ENST00000455343 CKMP06732 381 aa4.04□□□□□ -1.76
RBM39-220ENST00000455343 THP07101 528 aa4.04□□□□□ -1.76
RBM39-220ENST00000455343 PABPC1P11940 636 aaKnown RBP4.04□□□□□ -1.76
RBM39-220ENST00000455343 COL6A2P12110 1019 aa4.04□□□□□ -1.76
RBM39-220ENST00000455343 DNAJA1P31689 397 aaKnown RBP4.04□□□□□ -1.76
RBM39-220ENST00000455343 YWHABP31946 246 aaKnown RBP4.04□□□□□ -1.76
RBM39-220ENST00000455343 PXNP49023 591 aaPredicted RBP4.04□□□□□ -1.76
RBM39-220ENST00000455343 GPR85P60893 370 aa4.04□□□□□ -1.76
RBM39-220ENST00000455343 NCBP1Q09161 790 aaKnown RBP4.04□□□□□ -1.76
RBM39-220ENST00000455343 PPP2R5CQ13362 524 aa4.04□□□□□ -1.76
RBM39-220ENST00000455343 CAPSQ13938 189 aa4.04□□□□□ -1.76
RBM39-220ENST00000455343 EMC2Q15006 297 aa4.04□□□□□ -1.76
RBM39-220ENST00000455343 UPP1Q16831 310 aa4.04□□□□□ -1.76
RBM39-220ENST00000455343 CYP4A22Q5TCH4 519 aa4.04□□□□□ -1.76
RBM39-220ENST00000455343 CD276Q5ZPR3 534 aa4.04□□□□□ -1.76
RBM39-220ENST00000455343 CREB3L3Q68CJ9 461 aa4.04□□□□□ -1.76
RBM39-220ENST00000455343 ZNF585AQ6P3V2 769 aa4.04□□□□□ -1.76
RBM39-220ENST00000455343 CRIP3Q6Q6R5 217 aa4.04□□□□□ -1.76
RBM39-220ENST00000455343 PDZD4Q76G19 769 aaPredicted RBP4.04□□□□□ -1.76
RBM39-220ENST00000455343 CDR2LQ86X02 465 aaPredicted RBP4.04□□□□□ -1.76
RBM39-220ENST00000455343 LEMD2Q8NC56 503 aa4.04□□□□□ -1.76
RBM39-220ENST00000455343 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.04□□□□□ -1.76
RBM39-220ENST00000455343 BICD2Q8TD16 824 aa4.04□□□□□ -1.76
RBM39-220ENST00000455343 TBCKQ8TEA7 893 aa4.04□□□□□ -1.76
RBM39-220ENST00000455343 CCDC12Q8WUD4 166 aaPredicted RBP4.04□□□□□ -1.76
RBM39-220ENST00000455343 CHFRQ96EP1 664 aa4.04□□□□□ -1.76
RBM39-220ENST00000455343 AJUBAQ96IF1 538 aa4.04□□□□□ -1.76
RBM39-220ENST00000455343 WWC2-AS2Q96NR7 200 aa4.04□□□□□ -1.76
RBM39-220ENST00000455343 APOL6Q9BWW8 343 aa4.04□□□□□ -1.76
RBM39-220ENST00000455343 TRIM6Q9C030 488 aaPredicted RBP4.04□□□□□ -1.76
RBM39-220ENST00000455343 SCAND2PQ9GZW5 306 aaPredicted RBP4.04□□□□□ -1.76
RBM39-220ENST00000455343 FZD8Q9H461 694 aa4.04□□□□□ -1.76
RBM39-220ENST00000455343 KCNMB3Q9NPA1 279 aa4.04□□□□□ -1.76
RBM39-220ENST00000455343 OBP2AQ9NY56 170 aa4.04□□□□□ -1.76
RBM39-220ENST00000455343 GTSE1Q9NYZ3 720 aa4.04□□□□□ -1.76
RBM39-220ENST00000455343 CEP72Q9P209 647 aa4.04□□□□□ -1.76
RBM39-220ENST00000455343 MAFFQ9ULX9 164 aa4.04□□□□□ -1.76
RBM39-220ENST00000455343 TCAF1Q9Y4C2 921 aa4.04□□□□□ -1.76
RBM39-220ENST00000455343 NUB1Q9Y5A7 615 aa4.04□□□□□ -1.76
RBM39-220ENST00000455343 GOLGA8AA7E2F4 631 aa4.03□□□□□ -1.76
RBM39-220ENST00000455343 ZNF839A8K0R7 811 aa4.03□□□□□ -1.76
RBM39-220ENST00000455343 CYSRT1A8MQ03 144 aa4.03□□□□□ -1.76
RBM39-220ENST00000455343 GOLGA8BA8MQT2 603 aa4.03□□□□□ -1.76
RBM39-220ENST00000455343 TRDMT1O14717 391 aaKnown RBP4.03□□□□□ -1.76
RBM39-220ENST00000455343 TRAPPC3O43617 180 aa4.03□□□□□ -1.76
RBM39-220ENST00000455343 ATG13O75143 517 aa4.03□□□□□ -1.76
RBM39-220ENST00000455343 RECQL4O94761 1208 aa4.03□□□□□ -1.76
RBM39-220ENST00000455343 B3GAT3O94766 335 aa4.03□□□□□ -1.76
RBM39-220ENST00000455343 SLITRK3O94933 977 aa4.03□□□□□ -1.76
RBM39-220ENST00000455343 FBXO21O94952 628 aa4.03□□□□□ -1.76
RBM39-220ENST00000455343 LYPLA2O95372 231 aa4.03□□□□□ -1.76
RBM39-220ENST00000455343 CAVIN2O95810 425 aa4.03□□□□□ -1.76
RBM39-220ENST00000455343 CCDC192P0DO97 292 aa4.03□□□□□ -1.76
RBM39-220ENST00000455343 GJA1P17302 382 aa4.03□□□□□ -1.76
RBM39-220ENST00000455343 GLRA2P23416 452 aa4.03□□□□□ -1.76
RBM39-220ENST00000455343 TKTP29401 623 aaKnown RBP4.03□□□□□ -1.76
RBM39-220ENST00000455343 ELF1P32519 619 aa4.03□□□□□ -1.76
RBM39-220ENST00000455343 CSF2RBP32927 897 aa4.03□□□□□ -1.76
RBM39-220ENST00000455343 GLRBP48167 497 aa4.03□□□□□ -1.76
RBM39-220ENST00000455343 CLCNKBP51801 687 aa4.03□□□□□ -1.76
RBM39-220ENST00000455343 IRX4P78413 519 aa4.03□□□□□ -1.76
RBM39-220ENST00000455343 TFDP1Q14186 410 aa4.03□□□□□ -1.76
RBM39-220ENST00000455343 PON2Q15165 354 aa4.03□□□□□ -1.76
RBM39-220ENST00000455343 EPHA7Q15375 998 aa4.03□□□□□ -1.76
RBM39-220ENST00000455343 TEAD2Q15562 447 aa4.03□□□□□ -1.76
RBM39-220ENST00000455343 NPY5RQ15761 445 aa4.03□□□□□ -1.76
RBM39-220ENST00000455343 FAM187BQ17R55 369 aa4.03□□□□□ -1.76
RBM39-220ENST00000455343 ARHGAP29Q52LW3 1261 aa4.03□□□□□ -1.76
RBM39-220ENST00000455343 XKR4Q5GH76 650 aa4.03□□□□□ -1.76
RBM39-220ENST00000455343 TMEM196Q5HYL7 178 aa4.03□□□□□ -1.76
RBM39-220ENST00000455343 TPGS2Q68CL5 300 aa4.03□□□□□ -1.76
RBM39-220ENST00000455343 OTUD6AQ7L8S5 288 aa4.03□□□□□ -1.76
RBM39-220ENST00000455343 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.03□□□□□ -1.76
RBM39-220ENST00000455343 PIP4P1Q86T03 277 aa4.03□□□□□ -1.76
RBM39-220ENST00000455343 TMC8Q8IU68 726 aa4.03□□□□□ -1.76
RBM39-220ENST00000455343 ARID3BQ8IVW6 561 aaPredicted RBP4.03□□□□□ -1.76
RBM39-220ENST00000455343 REXO1L1PQ8IX06 675 aa4.03□□□□□ -1.76
RBM39-220ENST00000455343 PALM2Q8IXS6 379 aa4.03□□□□□ -1.76
RBM39-220ENST00000455343 BEST2Q8NFU1 509 aa4.03□□□□□ -1.76
RBM39-220ENST00000455343 CSGALNACT1Q8TDX6 532 aa4.03□□□□□ -1.76
RBM39-220ENST00000455343 HAS1Q92839 578 aa4.03□□□□□ -1.76
RBM39-220ENST00000455343 ZNF512Q96ME7 567 aaPredicted RBP4.03□□□□□ -1.76
RBM39-220ENST00000455343 FAM20AQ96MK3 541 aa4.03□□□□□ -1.76
RBM39-220ENST00000455343 TCEANC2Q96MN5 208 aa4.03□□□□□ -1.76
RBM39-220ENST00000455343 PPP1R10Q96QC0 940 aaKnown RBP4.03□□□□□ -1.76
RBM39-220ENST00000455343 KCNJ15Q99712 375 aa4.03□□□□□ -1.76
RBM39-220ENST00000455343 HSD17B14Q9BPX1 270 aa4.03□□□□□ -1.76
RBM39-220ENST00000455343 LXNQ9BS40 222 aa4.03□□□□□ -1.76
RBM39-220ENST00000455343 C22orf23Q9BZE7 217 aa4.03□□□□□ -1.76
RBM39-220ENST00000455343 DEF6Q9H4E7 631 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms