RNA–Protein interactions for RNA: ENST00000451823.2

HMGB3P22-202, Transcript of high mobility group box 3 pseudogene 22, humanhuman

BASIC

Gene HMGB3P22, Length 572 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P22-202ENST00000451823 ZDHHC7Q9NXF8 308 aa4.35□□□□□ -1.71
HMGB3P22-202ENST00000451823 NINJ2Q9NZG7 142 aa4.35□□□□□ -1.71
HMGB3P22-202ENST00000451823 DLGAP2Q9P1A6 1054 aa4.35□□□□□ -1.71
HMGB3P22-202ENST00000451823 STX18Q9P2W9 335 aaKnown RBP4.35□□□□□ -1.71
HMGB3P22-202ENST00000451823 DNAJB4Q9UDY4 337 aa4.35□□□□□ -1.71
HMGB3P22-202ENST00000451823 DSEQ9UL01 958 aa4.35□□□□□ -1.71
HMGB3P22-202ENST00000451823 ALG6Q9Y672 507 aa4.35□□□□□ -1.71
HMGB3P22-202ENST00000451823 DYNC1LI1Q9Y6G9 523 aaKnown RBP4.35□□□□□ -1.71
HMGB3P22-202ENST00000451823 NUMBLQ9Y6R0 609 aa4.35□□□□□ -1.71
HMGB3P22-202ENST00000451823 ASTN1O14525 1302 aa4.35□□□□□ -1.71
HMGB3P22-202ENST00000451823 KDM3AQ9Y4C1 1321 aa4.35□□□□□ -1.71
HMGB3P22-202ENST00000451823 NAV1Q8NEY1 1877 aa4.35□□□□□ -1.71
HMGB3P22-202ENST00000451823 KAT6BQ8WYB5 2073 aa4.34□□□□□ -1.71
HMGB3P22-202ENST00000451823 CYP3A7-CYP3A51PA0A087WV96 503 aa4.34□□□□□ -1.71
HMGB3P22-202ENST00000451823 TCRBV7S2A1N4TA0A589 114 aa4.34□□□□□ -1.71
HMGB3P22-202ENST00000451823 BLACEA4D250 179 aa4.34□□□□□ -1.71
HMGB3P22-202ENST00000451823 TSPY2A6NKD2 308 aa4.34□□□□□ -1.71
HMGB3P22-202ENST00000451823 KLRF2D3W0D1 207 aa4.34□□□□□ -1.71
HMGB3P22-202ENST00000451823 H0Y858 1186 aa4.34□□□□□ -1.71
HMGB3P22-202ENST00000451823 ACOT7O00154 380 aa4.34□□□□□ -1.71
HMGB3P22-202ENST00000451823 AP1G1O43747 822 aa4.34□□□□□ -1.71
HMGB3P22-202ENST00000451823 STRNO43815 780 aa4.34□□□□□ -1.71
HMGB3P22-202ENST00000451823 TYROBPO43914 113 aa4.34□□□□□ -1.71
HMGB3P22-202ENST00000451823 ATP9AO75110 1047 aa4.34□□□□□ -1.71
HMGB3P22-202ENST00000451823 ZBED4O75132 1171 aa4.34□□□□□ -1.71
HMGB3P22-202ENST00000451823 CDH16O75309 829 aa4.34□□□□□ -1.71
HMGB3P22-202ENST00000451823 ENTPD5O75356 428 aa4.34□□□□□ -1.71
HMGB3P22-202ENST00000451823 AKAP3O75969 853 aa4.34□□□□□ -1.71
HMGB3P22-202ENST00000451823 PSMG1O95456 288 aa4.34□□□□□ -1.71
HMGB3P22-202ENST00000451823 TDP2O95551 362 aa4.34□□□□□ -1.71
HMGB3P22-202ENST00000451823 NTSR2O95665 410 aa4.34□□□□□ -1.71
HMGB3P22-202ENST00000451823 STARD3NLO95772 234 aa4.34□□□□□ -1.71
HMGB3P22-202ENST00000451823 PDHA1P08559 390 aa4.34□□□□□ -1.71
HMGB3P22-202ENST00000451823 PLA2G4BP0C869 781 aa4.34□□□□□ -1.71
HMGB3P22-202ENST00000451823 PABPC4LP0CB38 370 aaKnown RBP4.34□□□□□ -1.71
HMGB3P22-202ENST00000451823 ZNF888P0CJ79 500 aaPredicted RBP4.34□□□□□ -1.71
HMGB3P22-202ENST00000451823 SNHG28P0DPA3 235 aa4.34□□□□□ -1.71
HMGB3P22-202ENST00000451823 PYGMP11217 842 aa4.34□□□□□ -1.71
HMGB3P22-202ENST00000451823 CHRNB2P17787 502 aa4.34□□□□□ -1.71
HMGB3P22-202ENST00000451823 CYP3A7P24462 503 aa4.34□□□□□ -1.71
HMGB3P22-202ENST00000451823 MARK3P27448 753 aa4.34□□□□□ -1.71
HMGB3P22-202ENST00000451823 EPHB2P29323 1055 aa4.34□□□□□ -1.71
HMGB3P22-202ENST00000451823 STX2P32856 288 aa4.34□□□□□ -1.71
HMGB3P22-202ENST00000451823 CHKAP35790 457 aa4.34□□□□□ -1.71
HMGB3P22-202ENST00000451823 IL6STP40189 918 aaPredicted RBP4.34□□□□□ -1.71
HMGB3P22-202ENST00000451823 SLCO1A2P46721 670 aa4.34□□□□□ -1.71
HMGB3P22-202ENST00000451823 MARCKSL1P49006 195 aa4.34□□□□□ -1.71
HMGB3P22-202ENST00000451823 RASSF2P50749 326 aa4.34□□□□□ -1.71
HMGB3P22-202ENST00000451823 CLCN2P51788 898 aa4.34□□□□□ -1.71
HMGB3P22-202ENST00000451823 RAP1GDS1P52306 607 aa4.34□□□□□ -1.71
HMGB3P22-202ENST00000451823 RBM5P52756 815 aaKnown RBP eCLIP4.34□□□□□ -1.71
HMGB3P22-202ENST00000451823 CACNA2D1P54289 1103 aa4.34□□□□□ -1.71
HMGB3P22-202ENST00000451823 NAPAP54920 295 aa4.34□□□□□ -1.71
HMGB3P22-202ENST00000451823 INHBCP55103 352 aa4.34□□□□□ -1.71
HMGB3P22-202ENST00000451823 RPL26P61254 145 aaKnown RBP4.34□□□□□ -1.71
HMGB3P22-202ENST00000451823 TFAP4Q01664 338 aa4.34□□□□□ -1.71
HMGB3P22-202ENST00000451823 MECOMQ03112 1051 aa4.34□□□□□ -1.71
HMGB3P22-202ENST00000451823 CAV1Q03135 178 aa4.34□□□□□ -1.71
HMGB3P22-202ENST00000451823 RNASELQ05823 741 aaKnown RBP4.34□□□□□ -1.71
HMGB3P22-202ENST00000451823 SLC34A1Q06495 639 aa4.34□□□□□ -1.71
HMGB3P22-202ENST00000451823 CTTNQ14247 550 aaKnown RBP4.34□□□□□ -1.71
HMGB3P22-202ENST00000451823 STAT4Q14765 748 aa4.34□□□□□ -1.71
HMGB3P22-202ENST00000451823 KPNB1Q14974 876 aaKnown RBP4.34□□□□□ -1.71
HMGB3P22-202ENST00000451823 KRT72Q14CN4 511 aa4.34□□□□□ -1.71
HMGB3P22-202ENST00000451823 PDK4Q16654 411 aa4.34□□□□□ -1.71
HMGB3P22-202ENST00000451823 KNOP1Q1ED39 458 aaKnown RBP4.34□□□□□ -1.71
HMGB3P22-202ENST00000451823 TMEM266Q2M3C6 531 aa4.34□□□□□ -1.71
HMGB3P22-202ENST00000451823 CNPY1Q3B7I2 92 aa4.34□□□□□ -1.71
HMGB3P22-202ENST00000451823 WDR72Q3MJ13 1102 aa4.34□□□□□ -1.71
HMGB3P22-202ENST00000451823 ACSBG2Q5FVE4 666 aa4.34□□□□□ -1.71
HMGB3P22-202ENST00000451823 SNX30Q5VWJ9 437 aa4.34□□□□□ -1.71
HMGB3P22-202ENST00000451823 CD276Q5ZPR3 534 aa4.34□□□□□ -1.71
HMGB3P22-202ENST00000451823 TRIM68Q6AZZ1 485 aa4.34□□□□□ -1.71
HMGB3P22-202ENST00000451823 AADACL2Q6P093 401 aa4.34□□□□□ -1.71
HMGB3P22-202ENST00000451823 CCDC137Q6PK04 289 aaKnown RBP4.34□□□□□ -1.71
HMGB3P22-202ENST00000451823 RSPO2Q6UXX9 243 aaPredicted RBP4.34□□□□□ -1.71
HMGB3P22-202ENST00000451823 DSTYKQ6XUX3 929 aa4.34□□□□□ -1.71
HMGB3P22-202ENST00000451823 LRRC74BQ6ZQY2 392 aa4.34□□□□□ -1.71
HMGB3P22-202ENST00000451823 RINLQ6ZS11 566 aa4.34□□□□□ -1.71
HMGB3P22-202ENST00000451823 TOM1L2Q6ZVM7 507 aa4.34□□□□□ -1.71
HMGB3P22-202ENST00000451823 HEATR3Q7Z4Q2 680 aa4.34□□□□□ -1.71
HMGB3P22-202ENST00000451823 ANKS1BQ7Z6G8 1248 aa4.34□□□□□ -1.71
HMGB3P22-202ENST00000451823 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.34□□□□□ -1.71
HMGB3P22-202ENST00000451823 NOP9Q86U38 636 aaKnown RBP4.34□□□□□ -1.71
HMGB3P22-202ENST00000451823 TRIM74Q86UV6 250 aa4.34□□□□□ -1.71
HMGB3P22-202ENST00000451823 TRIM73Q86UV7 250 aa4.34□□□□□ -1.71
HMGB3P22-202ENST00000451823 TRABD2AQ86V40 505 aa4.34□□□□□ -1.71
HMGB3P22-202ENST00000451823 LMO3Q8TAP4 145 aa4.34□□□□□ -1.71
HMGB3P22-202ENST00000451823 LRRC8CQ8TDW0 803 aa4.34□□□□□ -1.71
HMGB3P22-202ENST00000451823 TMEM174Q8WUU8 243 aa4.34□□□□□ -1.71
HMGB3P22-202ENST00000451823 CRYGNQ8WXF5 182 aa4.34□□□□□ -1.71
HMGB3P22-202ENST00000451823 LZICQ8WZA0 190 aa4.34□□□□□ -1.71
HMGB3P22-202ENST00000451823 PIGBQ92521 554 aa4.34□□□□□ -1.71
HMGB3P22-202ENST00000451823 KRT35Q92764 455 aa4.34□□□□□ -1.71
HMGB3P22-202ENST00000451823 EXTL1Q92935 676 aa4.34□□□□□ -1.71
HMGB3P22-202ENST00000451823 ERP27Q96DN0 273 aa4.34□□□□□ -1.71
HMGB3P22-202ENST00000451823 FAM84BQ96KN1 310 aaPredicted RBP4.34□□□□□ -1.71
HMGB3P22-202ENST00000451823 PLEKHG4BQ96PX9 1271 aa4.34□□□□□ -1.71
HMGB3P22-202ENST00000451823 NDNQ99608 321 aa4.34□□□□□ -1.71
HMGB3P22-202ENST00000451823 SLX1AQ9BQ83 275 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms