RNA–Protein interactions for RNA: ENST00000449575.6

CCDC171-203, Transcript of coiled-coil domain containing 171, humanhuman

TSL 2

Gene CCDC171, Length 2,628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-203ENST00000449575 FCHO2Q0JRZ9 810 aa10.21□□□□□ -0.77
CCDC171-203ENST00000449575 ZC3H12AQ5D1E8 599 aaKnown RBP10.21□□□□□ -0.77
CCDC171-203ENST00000449575 DENND1CQ8IV53 801 aa10.21□□□□□ -0.77
CCDC171-203ENST00000449575 FCRL2Q96LA5 508 aaPredicted RBP10.21□□□□□ -0.77
CCDC171-203ENST00000449575 OSGEPQ9NPF4 335 aa10.21□□□□□ -0.77
CCDC171-203ENST00000449575 DDIT4Q9NX09 232 aa10.21□□□□□ -0.77
CCDC171-203ENST00000449575 WDR35Q9P2L0 1181 aa10.21□□□□□ -0.77
CCDC171-203ENST00000449575 ANKRD62A6NC57 917 aa10.21□□□□□ -0.78
CCDC171-203ENST00000449575 ARNTLO00327 626 aa10.21□□□□□ -0.78
CCDC171-203ENST00000449575 TRDMT1O14717 391 aaKnown RBP10.21□□□□□ -0.78
CCDC171-203ENST00000449575 LCA5LO95447 670 aa10.21□□□□□ -0.78
CCDC171-203ENST00000449575 IGLV3-27P01718 113 aa10.21□□□□□ -0.78
CCDC171-203ENST00000449575 PFKLP17858 780 aa10.21□□□□□ -0.78
CCDC171-203ENST00000449575 CORO1AP31146 461 aaKnown RBP10.21□□□□□ -0.78
CCDC171-203ENST00000449575 SLC8A1P32418 973 aa10.21□□□□□ -0.78
CCDC171-203ENST00000449575 SCNN1AP37088 669 aa10.21□□□□□ -0.78
CCDC171-203ENST00000449575 IFFO1Q0D2I5 559 aa10.21□□□□□ -0.78
CCDC171-203ENST00000449575 SNCBQ16143 134 aa10.21□□□□□ -0.78
CCDC171-203ENST00000449575 NAIF1Q69YI7 327 aaPredicted RBP10.21□□□□□ -0.78
CCDC171-203ENST00000449575 BEND5Q7L4P6 421 aa10.21□□□□□ -0.78
CCDC171-203ENST00000449575 ARFGAP1Q8N6T3 406 aa10.21□□□□□ -0.78
CCDC171-203ENST00000449575 MYEOVQ96EZ4 313 aa10.21□□□□□ -0.78
CCDC171-203ENST00000449575 SLC39A13Q96H72 371 aa10.21□□□□□ -0.78
CCDC171-203ENST00000449575 FAM83CQ9BQN1 747 aa10.21□□□□□ -0.78
CCDC171-203ENST00000449575 HPS4Q9NQG7 708 aa10.21□□□□□ -0.78
CCDC171-203ENST00000449575 OLA1Q9NTK5 396 aaKnown RBP10.21□□□□□ -0.78
CCDC171-203ENST00000449575 IGSF9Q9P2J2 1179 aa10.21□□□□□ -0.78
CCDC171-203ENST00000449575 ZMYM5Q9UJ78 669 aa10.21□□□□□ -0.78
CCDC171-203ENST00000449575 SH3BP1Q9Y3L3 701 aa10.21□□□□□ -0.78
CCDC171-203ENST00000449575 NUP205Q92621 2012 aa10.21□□□□□ -0.78
CCDC171-203ENST00000449575 TMEM191CA6NGB0 347 aa10.2□□□□□ -0.78
CCDC171-203ENST00000449575 MOCS2O96007 188 aaPredicted RBP10.2□□□□□ -0.78
CCDC171-203ENST00000449575 TCF4P15884 667 aa10.2□□□□□ -0.78
CCDC171-203ENST00000449575 SOX9P48436 509 aa10.2□□□□□ -0.78
CCDC171-203ENST00000449575 TBX4P57082 545 aa10.2□□□□□ -0.78
CCDC171-203ENST00000449575 TDGQ13569 410 aa10.2□□□□□ -0.78
CCDC171-203ENST00000449575 TRIP4Q15650 581 aaPredicted RBP10.2□□□□□ -0.78
CCDC171-203ENST00000449575 SLC25A52Q3SY17 297 aa10.2□□□□□ -0.78
CCDC171-203ENST00000449575 PAPD7Q5XG87 772 aaKnown RBP10.2□□□□□ -0.78
CCDC171-203ENST00000449575 DCUN1D2Q6PH85 259 aa10.2□□□□□ -0.78
CCDC171-203ENST00000449575 Q6ZNB5 142 aa10.2□□□□□ -0.78
CCDC171-203ENST00000449575 BNIPLQ7Z465 357 aa10.2□□□□□ -0.78
CCDC171-203ENST00000449575 AENQ8WTP8 325 aaKnown RBP10.2□□□□□ -0.78
CCDC171-203ENST00000449575 BHMTQ93088 406 aa10.2□□□□□ -0.78
CCDC171-203ENST00000449575 CHFRQ96EP1 664 aa10.2□□□□□ -0.78
CCDC171-203ENST00000449575 TRMT61BQ9BVS5 477 aaKnown RBP10.2□□□□□ -0.78
CCDC171-203ENST00000449575 NUP85Q9BW27 656 aa10.2□□□□□ -0.78
CCDC171-203ENST00000449575 CD248Q9HCU0 757 aa10.2□□□□□ -0.78
CCDC171-203ENST00000449575 PARVAQ9NVD7 372 aa10.2□□□□□ -0.78
CCDC171-203ENST00000449575 SALL4Q9UJQ4 1053 aa10.2□□□□□ -0.78
CCDC171-203ENST00000449575 AGO1Q9UL18 857 aaKnown RBP10.2□□□□□ -0.78
CCDC171-203ENST00000449575 SNX10Q9Y5X0 201 aa10.2□□□□□ -0.78
CCDC171-203ENST00000449575 DUSP10Q9Y6W6 482 aa10.2□□□□□ -0.78
CCDC171-203ENST00000449575 RASSF9O75901 435 aa10.2□□□□□ -0.78
CCDC171-203ENST00000449575 CYP1A2P05177 515 aa10.2□□□□□ -0.78
CCDC171-203ENST00000449575 H2AFZP0C0S5 128 aa10.2□□□□□ -0.78
CCDC171-203ENST00000449575 HDAC4P56524 1084 aa10.2□□□□□ -0.78
CCDC171-203ENST00000449575 COG7P83436 770 aa10.2□□□□□ -0.78
CCDC171-203ENST00000449575 NADSYN1Q6IA69 706 aa10.2□□□□□ -0.78
CCDC171-203ENST00000449575 H2AFVQ71UI9 128 aa10.2□□□□□ -0.78
CCDC171-203ENST00000449575 TAX1BP1Q86VP1 789 aa10.2□□□□□ -0.78
CCDC171-203ENST00000449575 FAM131BQ86XD5 332 aa10.2□□□□□ -0.78
CCDC171-203ENST00000449575 CCDC170Q8IYT3 715 aa10.2□□□□□ -0.78
CCDC171-203ENST00000449575 CDK5RAP1Q96SZ6 601 aaKnown RBP10.2□□□□□ -0.78
CCDC171-203ENST00000449575 TLR6Q9Y2C9 796 aa10.2□□□□□ -0.78
CCDC171-203ENST00000449575 PCDHA13Q9Y5I0 950 aa10.2□□□□□ -0.78
CCDC171-203ENST00000449575 KIAA1549LQ6ZVL6 1849 aa10.2□□□□□ -0.78
CCDC171-203ENST00000449575 TCF3P15923 654 aa10.2□□□□□ -0.78
CCDC171-203ENST00000449575 GPD1P21695 349 aa10.2□□□□□ -0.78
CCDC171-203ENST00000449575 MAGEA1P43355 309 aa10.2□□□□□ -0.78
CCDC171-203ENST00000449575 SGSHP51688 502 aa10.2□□□□□ -0.78
CCDC171-203ENST00000449575 EML3Q32P44 896 aa10.2□□□□□ -0.78
CCDC171-203ENST00000449575 RFWD3Q6PCD5 774 aa10.2□□□□□ -0.78
CCDC171-203ENST00000449575 HTR3DQ70Z44 454 aa10.2□□□□□ -0.78
CCDC171-203ENST00000449575 ARCQ7LC44 396 aa10.2□□□□□ -0.78
CCDC171-203ENST00000449575 ADGRG2Q8IZP9 1017 aa10.2□□□□□ -0.78
CCDC171-203ENST00000449575 FAM172AQ8WUF8 416 aa10.2□□□□□ -0.78
CCDC171-203ENST00000449575 SERPINB11Q96P15 392 aa10.2□□□□□ -0.78
CCDC171-203ENST00000449575 LACRTQ9GZZ8 138 aa10.2□□□□□ -0.78
CCDC171-203ENST00000449575 EPN3Q9H201 632 aa10.2□□□□□ -0.78
CCDC171-203ENST00000449575 BRD9Q9H8M2 597 aa10.2□□□□□ -0.78
CCDC171-203ENST00000449575 KIF9Q9HAQ2 790 aa10.2□□□□□ -0.78
CCDC171-203ENST00000449575 HEBP1Q9NRV9 189 aa10.2□□□□□ -0.78
CCDC171-203ENST00000449575 DUS2Q9NX74 493 aaKnown RBP10.2□□□□□ -0.78
CCDC171-203ENST00000449575 OBP2AQ9NY56 170 aa10.2□□□□□ -0.78
CCDC171-203ENST00000449575 TRIM10Q9UDY6 481 aa10.2□□□□□ -0.78
CCDC171-203ENST00000449575 SORCS3Q9UPU3 1222 aa10.2□□□□□ -0.78
CCDC171-203ENST00000449575 E2F8A0AVK6 867 aa10.19□□□□□ -0.78
CCDC171-203ENST00000449575 SHISA7A6NL88 538 aa10.19□□□□□ -0.78
CCDC171-203ENST00000449575 TMEM253P0C7T8 217 aa10.19□□□□□ -0.78
CCDC171-203ENST00000449575 SDC4P31431 198 aa10.19□□□□□ -0.78
CCDC171-203ENST00000449575 SLC6A4P31645 630 aa10.19□□□□□ -0.78
CCDC171-203ENST00000449575 CYLC1P35663 651 aaPredicted RBP10.19□□□□□ -0.78
CCDC171-203ENST00000449575 ZNF143P52747 638 aaPredicted RBP10.19□□□□□ -0.78
CCDC171-203ENST00000449575 NAP1L1P55209 391 aaKnown RBP10.19□□□□□ -0.78
CCDC171-203ENST00000449575 DEUP1Q05D60 604 aa10.19□□□□□ -0.78
CCDC171-203ENST00000449575 EMBQ6PCB8 327 aa10.19□□□□□ -0.78
CCDC171-203ENST00000449575 ZNF662Q6ZS27 426 aa10.19□□□□□ -0.78
CCDC171-203ENST00000449575 TMEM25Q86YD3 366 aa10.19□□□□□ -0.78
CCDC171-203ENST00000449575 SLC35G2Q8TBE7 412 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms