RNA–Protein interactions for RNA: ENST00000446877.5

PMS1-214, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 4

Gene PMS1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-214ENST00000446877 TSPAN16Q9UKR8 245 aa25.38■■□□□ 1.65
PMS1-214ENST00000446877 SCML1Q9UN30 329 aa25.38■■□□□ 1.65
PMS1-214ENST00000446877 GOLGA4Q13439 2230 aaKnown RBP25.37■■□□□ 1.65
PMS1-214ENST00000446877 TULP2O00295 520 aa25.37■■□□□ 1.65
PMS1-214ENST00000446877 RNASEH1O60930 286 aaKnown RBP25.37■■□□□ 1.65
PMS1-214ENST00000446877 ST8SIA6P61647 398 aa25.37■■□□□ 1.65
PMS1-214ENST00000446877 BST2Q10589 180 aaKnown RBP25.37■■□□□ 1.65
PMS1-214ENST00000446877 KCNT1Q5JUK3 1230 aa25.37■■□□□ 1.65
PMS1-214ENST00000446877 MPP7Q5T2T1 576 aa25.37■■□□□ 1.65
PMS1-214ENST00000446877 USP30Q70CQ3 517 aa25.37■■□□□ 1.65
PMS1-214ENST00000446877 BHLHA9Q7RTU4 235 aa25.37■■□□□ 1.65
PMS1-214ENST00000446877 TMPRSS12Q86WS5 348 aa25.37■■□□□ 1.65
PMS1-214ENST00000446877 TATDN2Q93075 761 aa25.37■■□□□ 1.65
PMS1-214ENST00000446877 BBC3Q96PG8 261 aaPredicted RBP25.37■■□□□ 1.65
PMS1-214ENST00000446877 YJEFN3A6XGL0 299 aa25.36■■□□□ 1.65
PMS1-214ENST00000446877 E7ENQ6 273 aa25.36■■□□□ 1.65
PMS1-214ENST00000446877 VILLO15195 856 aa25.36■■□□□ 1.65
PMS1-214ENST00000446877 TBL1XO60907 577 aa25.36■■□□□ 1.65
PMS1-214ENST00000446877 CD19P15391 556 aa25.36■■□□□ 1.65
PMS1-214ENST00000446877 SYKP43405 635 aa25.36■■□□□ 1.65
PMS1-214ENST00000446877 SLC11A2P49281 568 aa25.36■■□□□ 1.65
PMS1-214ENST00000446877 UNC45BQ8IWX7 931 aa25.36■■□□□ 1.65
PMS1-214ENST00000446877 DCBLD2Q96PD2 775 aa25.36■■□□□ 1.65
PMS1-214ENST00000446877 IRX2Q9BZI1 471 aaPredicted RBP25.36■■□□□ 1.65
PMS1-214ENST00000446877 RSPH9Q9H1X1 276 aaPredicted RBP25.36■■□□□ 1.65
PMS1-214ENST00000446877 PABPC3Q9H361 631 aaKnown RBP25.36■■□□□ 1.65
PMS1-214ENST00000446877 FBXL12Q9NXK8 326 aa25.36■■□□□ 1.65
PMS1-214ENST00000446877 ASXL3Q9C0F0 2248 aa25.36■■□□□ 1.65
PMS1-214ENST00000446877 CKAP5Q14008 2032 aa25.36■■□□□ 1.65
PMS1-214ENST00000446877 A0A1B0GTQ1 180 aa25.35■■□□□ 1.65
PMS1-214ENST00000446877 MSI1O43347 362 aaKnown RBP25.35■■□□□ 1.65
PMS1-214ENST00000446877 EPB41P11171 864 aaKnown RBP25.35■■□□□ 1.65
PMS1-214ENST00000446877 JUPP14923 745 aa25.35■■□□□ 1.65
PMS1-214ENST00000446877 CD70P32970 193 aa25.35■■□□□ 1.65
PMS1-214ENST00000446877 YWHAEP62258 255 aaKnown RBP25.35■■□□□ 1.65
PMS1-214ENST00000446877 ZC3H3Q8IXZ2 948 aaKnown RBP25.35■■□□□ 1.65
PMS1-214ENST00000446877 UBA3Q8TBC4 463 aa25.35■■□□□ 1.65
PMS1-214ENST00000446877 CNGB3Q9NQW8 809 aa25.35■■□□□ 1.65
PMS1-214ENST00000446877 HPSEQ9Y251 543 aa25.35■■□□□ 1.65
PMS1-214ENST00000446877 CETN3O15182 167 aa25.34■■□□□ 1.65
PMS1-214ENST00000446877 IRAK2O43187 625 aa25.34■■□□□ 1.65
PMS1-214ENST00000446877 PAPSS1O43252 624 aaPredicted RBP25.34■■□□□ 1.65
PMS1-214ENST00000446877 IGHV4-34P06331 123 aa25.34■■□□□ 1.65
PMS1-214ENST00000446877 LCP1P13796 627 aa25.34■■□□□ 1.65
PMS1-214ENST00000446877 ABCB4P21439 1286 aa25.34■■□□□ 1.65
PMS1-214ENST00000446877 HNF1BP35680 557 aa25.34■■□□□ 1.65
PMS1-214ENST00000446877 PIK3R6Q5UE93 754 aa25.34■■□□□ 1.65
PMS1-214ENST00000446877 RFWD3Q6PCD5 774 aa25.34■■□□□ 1.65
PMS1-214ENST00000446877 CCDC117Q8IWD4 279 aaPredicted RBP25.34■■□□□ 1.65
PMS1-214ENST00000446877 KCTD13Q8WZ19 329 aa25.34■■□□□ 1.65
PMS1-214ENST00000446877 SNX21Q969T3 373 aa25.34■■□□□ 1.65
PMS1-214ENST00000446877 EEF2KMTQ96G04 330 aa25.34■■□□□ 1.65
PMS1-214ENST00000446877 ELF4Q99607 663 aaPredicted RBP25.34■■□□□ 1.65
PMS1-214ENST00000446877 ORAI3Q9BRQ5 295 aa25.34■■□□□ 1.65
PMS1-214ENST00000446877 STIM2Q9P246 746 aa25.34■■□□□ 1.65
PMS1-214ENST00000446877 PCDHGA1Q9Y5H4 931 aa25.34■■□□□ 1.65
PMS1-214ENST00000446877 PTPRBP23467 1997 aa25.34■■□□□ 1.65
PMS1-214ENST00000446877 NUMA1Q14980 2115 aa25.34■■□□□ 1.65
PMS1-214ENST00000446877 A0A1W2PPC4 97 aa25.33■■□□□ 1.65
PMS1-214ENST00000446877 LRRC72A6NJI9 287 aa25.33■■□□□ 1.65
PMS1-214ENST00000446877 LDOC1O95751 146 aaPredicted RBP25.33■■□□□ 1.65
PMS1-214ENST00000446877 ITGAVP06756 1048 aa25.33■■□□□ 1.65
PMS1-214ENST00000446877 PRR29P0C7W0 189 aa25.33■■□□□ 1.65
PMS1-214ENST00000446877 SETSIPP0DME0 302 aa25.33■■□□□ 1.65
PMS1-214ENST00000446877 CDK4P11802 303 aa25.33■■□□□ 1.65
PMS1-214ENST00000446877 ABCG1P45844 678 aa25.33■■□□□ 1.65
PMS1-214ENST00000446877 SGSHP51688 502 aa25.33■■□□□ 1.65
PMS1-214ENST00000446877 GALCP54803 685 aa25.33■■□□□ 1.65
PMS1-214ENST00000446877 MCCD1P59942 119 aaPredicted RBP25.33■■□□□ 1.65
PMS1-214ENST00000446877 DPYDQ12882 1025 aa25.33■■□□□ 1.65
PMS1-214ENST00000446877 CUL2Q13617 745 aa25.33■■□□□ 1.65
PMS1-214ENST00000446877 EDRF1Q3B7T1 1238 aa25.33■■□□□ 1.65
PMS1-214ENST00000446877 PRAMEF14Q5SWL7 426 aa25.33■■□□□ 1.65
PMS1-214ENST00000446877 NUGGCQ68CJ6 796 aa25.33■■□□□ 1.65
PMS1-214ENST00000446877 MFN1Q8IWA4 741 aa25.33■■□□□ 1.65
PMS1-214ENST00000446877 NXPE2Q96DL1 559 aa25.33■■□□□ 1.65
PMS1-214ENST00000446877 SLC6A18Q96N87 628 aa25.33■■□□□ 1.65
PMS1-214ENST00000446877 OMDQ99983 421 aa25.33■■□□□ 1.65
PMS1-214ENST00000446877 DDX50Q9BQ39 737 aaKnown RBP25.33■■□□□ 1.65
PMS1-214ENST00000446877 MTG2Q9H4K7 406 aa25.33■■□□□ 1.65
PMS1-214ENST00000446877 AASDHPPTQ9NRN7 309 aa25.33■■□□□ 1.65
PMS1-214ENST00000446877 KIAA1257Q9ULG3 409 aa25.33■■□□□ 1.65
PMS1-214ENST00000446877 GOLGA6L7A0A1B0GV03 622 aa25.32■■□□□ 1.64
PMS1-214ENST00000446877 TYW5A2RUC4 315 aaKnown RBP25.32■■□□□ 1.64
PMS1-214ENST00000446877 PLK4O00444 970 aa25.32■■□□□ 1.64
PMS1-214ENST00000446877 ENC1O14682 589 aa25.32■■□□□ 1.64
PMS1-214ENST00000446877 ASLP04424 464 aa25.32■■□□□ 1.64
PMS1-214ENST00000446877 VDRP11473 427 aa25.32■■□□□ 1.64
PMS1-214ENST00000446877 HNRNPA1L2Q32P51 320 aaKnown RBP25.32■■□□□ 1.64
PMS1-214ENST00000446877 C6orf118Q5T5N4 469 aa25.32■■□□□ 1.64
PMS1-214ENST00000446877 TCERG1LQ5VWI1 586 aa25.32■■□□□ 1.64
PMS1-214ENST00000446877 GATAD2AQ86YP4 633 aa25.32■■□□□ 1.64
PMS1-214ENST00000446877 WFDC5Q8TCV5 224 aa25.32■■□□□ 1.64
PMS1-214ENST00000446877 TTC17Q96AE7 1141 aa25.32■■□□□ 1.64
PMS1-214ENST00000446877 ACSL4O60488 711 aa25.31■■□□□ 1.64
PMS1-214ENST00000446877 SIN3BO75182 1162 aa25.31■■□□□ 1.64
PMS1-214ENST00000446877 RNASEH2AO75792 299 aaKnown RBP25.31■■□□□ 1.64
PMS1-214ENST00000446877 C1SP09871 688 aa25.31■■□□□ 1.64
PMS1-214ENST00000446877 DAOAP59103 153 aa25.31■■□□□ 1.64
PMS1-214ENST00000446877 CST6Q15828 149 aa25.31■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms